RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 SLIRPQ9GZT3 109 aaKnown RBP10.33□□□□□ -0.76
PRPF40A-201ENST00000354363 NACAE9PAV3 2078 aa10.33□□□□□ -0.76
PRPF40A-201ENST00000354363 DUXBA0A1W2PPF3 345 aa10.33□□□□□ -0.76
PRPF40A-201ENST00000354363 SNRPGP15A8MWD9 76 aa10.33□□□□□ -0.76
PRPF40A-201ENST00000354363 IAPPP10997 89 aa10.33□□□□□ -0.76
PRPF40A-201ENST00000354363 ZNF79Q15937 498 aa10.33□□□□□ -0.76
PRPF40A-201ENST00000354363 OR4B1Q8NGF8 309 aa10.33□□□□□ -0.76
PRPF40A-201ENST00000354363 PPP1R14BQ96C90 147 aa10.33□□□□□ -0.76
PRPF40A-201ENST00000354363 RFNGQ9Y644 331 aa10.33□□□□□ -0.76
PRPF40A-201ENST00000354363 IGKV1OR2-108A0A075B7D4 117 aa10.32□□□□□ -0.76
PRPF40A-201ENST00000354363 A0A1B0GVY2 172 aa10.32□□□□□ -0.76
PRPF40A-201ENST00000354363 FABP12A6NFH5 140 aa10.32□□□□□ -0.76
PRPF40A-201ENST00000354363 PAX9P55771 341 aa10.32□□□□□ -0.76
PRPF40A-201ENST00000354363 RAB11AP62491 216 aa10.32□□□□□ -0.76
PRPF40A-201ENST00000354363 SPATA31B1PQ5VZV4 182 aa10.32□□□□□ -0.76
PRPF40A-201ENST00000354363 OR8I2Q8N0Y5 310 aa10.32□□□□□ -0.76
PRPF40A-201ENST00000354363 THAP8Q8NA92 274 aa10.32□□□□□ -0.76
PRPF40A-201ENST00000354363 SLC35B3Q9H1N7 401 aa10.32□□□□□ -0.76
PRPF40A-201ENST00000354363 DKK2Q9UBU2 259 aa10.32□□□□□ -0.76
PRPF40A-201ENST00000354363 MUC4Q99102 2169 aa10.31□□□□□ -0.76
PRPF40A-201ENST00000354363 PIGBOS1A0A0B4J2F0 54 aa10.31□□□□□ -0.76
PRPF40A-201ENST00000354363 F6UB75 175 aa10.31□□□□□ -0.76
PRPF40A-201ENST00000354363 ISLRO14498 428 aa10.31□□□□□ -0.76
PRPF40A-201ENST00000354363 PSG9Q00887 426 aa10.31□□□□□ -0.76
PRPF40A-201ENST00000354363 TMEM128Q5BJH2 165 aa10.31□□□□□ -0.76
PRPF40A-201ENST00000354363 TMED4Q7Z7H5 227 aa10.31□□□□□ -0.76
PRPF40A-201ENST00000354363 PAIP2BQ9ULR5 123 aaKnown RBP10.31□□□□□ -0.76
PRPF40A-201ENST00000354363 A0A0J9YX75 114 aa10.3□□□□□ -0.76
PRPF40A-201ENST00000354363 M0R2N4 97 aa10.3□□□□□ -0.76
PRPF40A-201ENST00000354363 SLC25A6P12236 298 aa10.3□□□□□ -0.76
PRPF40A-201ENST00000354363 FAM222AQ5U5X8 452 aa10.3□□□□□ -0.76
PRPF40A-201ENST00000354363 FAM78BQ5VT40 261 aa10.3□□□□□ -0.76
PRPF40A-201ENST00000354363 EBLN2Q6P2I7 272 aa10.3□□□□□ -0.76
PRPF40A-201ENST00000354363 C1orf158Q8N1D5 194 aa10.3□□□□□ -0.76
PRPF40A-201ENST00000354363 LRTM2Q8N967 370 aa10.3□□□□□ -0.76
PRPF40A-201ENST00000354363 C20orf173Q96LM9 149 aa10.3□□□□□ -0.76
PRPF40A-201ENST00000354363 DYNC1H1Q14204 4646 aaKnown RBP10.3□□□□□ -0.76
PRPF40A-201ENST00000354363 TEX48A0A1B0GUV7 120 aa10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 H3BMQ9 156 aa10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 RTL8CO15255 209 aa10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 FAUP35544 74 aaKnown RBP10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 TRIM63Q969Q1 353 aa10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 C17orf77Q96MU5 243 aa10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 NIPSNAP3BQ9BS92 247 aa10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 SLC25A32Q9H2D1 315 aa10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 PLA2G2EQ9NZK7 142 aa10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 GOLT1BQ9Y3E0 138 aa10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 PRSS46E5RG02 174 aa10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 MED6O75586 246 aa10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 MEOX2P50222 304 aa10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 SAMD13Q5VXD3 122 aa10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 GGNBP1Q5YKI7 109 aa10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 MCFD2Q8NI22 146 aa10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 FAM210BQ96KR6 192 aa10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 C16orf92Q96LL3 132 aa10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 C7orf50Q9BRJ6 194 aaKnown RBP10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 RPRMQ9NS64 109 aa10.29□□□□□ -0.76
PRPF40A-201ENST00000354363 PRSS29PA6NIE9 313 aa10.28□□□□□ -0.76
PRPF40A-201ENST00000354363 A8MTW9 85 aa10.28□□□□□ -0.76
PRPF40A-201ENST00000354363 NOL3O60936 208 aaKnown RBP10.28□□□□□ -0.76
PRPF40A-201ENST00000354363 CFDP00746 253 aaPredicted RBP10.28□□□□□ -0.76
PRPF40A-201ENST00000354363 HBE1P02100 147 aa10.28□□□□□ -0.76
PRPF40A-201ENST00000354363 VAMP1P23763 118 aa10.28□□□□□ -0.76
PRPF40A-201ENST00000354363 GALR1P47211 349 aa10.28□□□□□ -0.76
PRPF40A-201ENST00000354363 OXA1LQ15070 435 aa10.28□□□□□ -0.76
PRPF40A-201ENST00000354363 LGALS9BQ3B8N2 356 aa10.28□□□□□ -0.76
PRPF40A-201ENST00000354363 TOMM5Q8N4H5 51 aa10.28□□□□□ -0.76
PRPF40A-201ENST00000354363 CIB3Q96Q77 187 aaPredicted RBP10.28□□□□□ -0.76
PRPF40A-201ENST00000354363 MAGT1Q9H0U3 335 aa10.28□□□□□ -0.76
PRPF40A-201ENST00000354363 SLC25A22Q9H936 323 aa10.28□□□□□ -0.76
PRPF40A-201ENST00000354363 DOK5Q9P104 306 aa10.28□□□□□ -0.76
PRPF40A-201ENST00000354363 SLC45A2Q9UMX9 530 aa10.28□□□□□ -0.76
PRPF40A-201ENST00000354363 TMED3Q9Y3Q3 217 aa10.28□□□□□ -0.76
PRPF40A-201ENST00000354363 PCLOQ9Y6V0 5065 aa10.28□□□□□ -0.76
PRPF40A-201ENST00000354363 LOC102723971A0A1B0GUV8 181 aa10.27□□□□□ -0.77
PRPF40A-201ENST00000354363 ZNF98A6NK75 572 aa10.27□□□□□ -0.77
PRPF40A-201ENST00000354363 WRBO00258 174 aa10.27□□□□□ -0.77
PRPF40A-201ENST00000354363 SYNGR2O43760 224 aa10.27□□□□□ -0.77
PRPF40A-201ENST00000354363 SFT2D2O95562 160 aa10.27□□□□□ -0.77
PRPF40A-201ENST00000354363 GATA2P23769 480 aaPredicted RBP10.27□□□□□ -0.77
PRPF40A-201ENST00000354363 AP3S2P59780 193 aa10.27□□□□□ -0.77
PRPF40A-201ENST00000354363 RPP30P78346 268 aaKnown RBP10.27□□□□□ -0.77
PRPF40A-201ENST00000354363 PYDC2Q56P42 97 aa10.27□□□□□ -0.77
PRPF40A-201ENST00000354363 RSG1Q9BU20 258 aa10.27□□□□□ -0.77
PRPF40A-201ENST00000354363 YTHDF2Q9Y5A9 579 aaKnown RBP10.27□□□□□ -0.77
PRPF40A-201ENST00000354363 DNAH11Q96DT5 4516 aa10.26□□□□□ -0.77
PRPF40A-201ENST00000354363 PKD1P98161 4303 aa10.26□□□□□ -0.77
PRPF40A-201ENST00000354363 IFNA21P01568 189 aa10.26□□□□□ -0.77
PRPF40A-201ENST00000354363 HTN3P15516 51 aa10.26□□□□□ -0.77
PRPF40A-201ENST00000354363 PPP1R1AQ13522 171 aa10.26□□□□□ -0.77
PRPF40A-201ENST00000354363 RRN3P1Q2M238 152 aa10.26□□□□□ -0.77
PRPF40A-201ENST00000354363 AMTNQ6UX39 209 aa10.26□□□□□ -0.77
PRPF40A-201ENST00000354363 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.26□□□□□ -0.77
PRPF40A-201ENST00000354363 TMEM182Q6ZP80 229 aaPredicted RBP10.26□□□□□ -0.77
PRPF40A-201ENST00000354363 UBE2DNLQ8IWF7 75 aa10.26□□□□□ -0.77
PRPF40A-201ENST00000354363 BPIFCQ8NFQ6 507 aa10.26□□□□□ -0.77
PRPF40A-201ENST00000354363 SLC25A21Q9BQT8 299 aaPredicted RBP10.26□□□□□ -0.77
PRPF40A-201ENST00000354363 V9GYH0 126 aa10.26□□□□□ -0.77
PRPF40A-201ENST00000354363 HOXB5P09067 269 aa10.25□□□□□ -0.77
PRPF40A-201ENST00000354363 ORM2P19652 201 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms