RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 TMEM183AQ8IXX5 376 aa12.25□□□□□ -0.45
MBD1-205ENST00000353909 SRSF8Q9BRL6 282 aaKnown RBP12.25□□□□□ -0.45
MBD1-205ENST00000353909 SH2D7A6NKC9 451 aaPredicted RBP12.24□□□□□ -0.45
MBD1-205ENST00000353909 SLC25A5P05141 298 aaKnown RBP12.24□□□□□ -0.45
MBD1-205ENST00000353909 IBA57Q5T440 356 aaKnown RBP12.24□□□□□ -0.45
MBD1-205ENST00000353909 MINOS1Q5TGZ0 78 aa12.24□□□□□ -0.45
MBD1-205ENST00000353909 MINOS1-NBL1R4GNA1 71 aa12.24□□□□□ -0.45
MBD1-205ENST00000353909 CSPG4Q6UVK1 2322 aa12.24□□□□□ -0.45
MBD1-205ENST00000353909 FBN2P35556 2912 aa12.24□□□□□ -0.45
MBD1-205ENST00000353909 IGHV3OR16-10A0A075B7F0 116 aa12.24□□□□□ -0.45
MBD1-205ENST00000353909 EGR2P11161 476 aaPredicted RBP12.24□□□□□ -0.45
MBD1-205ENST00000353909 CNN1P51911 297 aaKnown RBP12.24□□□□□ -0.45
MBD1-205ENST00000353909 EBI3Q14213 229 aa12.24□□□□□ -0.45
MBD1-205ENST00000353909 Q71RC1 249 aaPredicted RBP12.24□□□□□ -0.45
MBD1-205ENST00000353909 BAGE2Q86Y30 109 aa12.24□□□□□ -0.45
MBD1-205ENST00000353909 HSPB9Q9BQS6 159 aa12.24□□□□□ -0.45
MBD1-205ENST00000353909 SERTAD4Q9NUC0 356 aa12.24□□□□□ -0.45
MBD1-205ENST00000353909 EPDR1Q9UM22 224 aa12.24□□□□□ -0.45
MBD1-205ENST00000353909 IGLV11-55A0A075B6I3 123 aa12.24□□□□□ -0.45
MBD1-205ENST00000353909 IGHV7-81A0A0B4J1V7 117 aa12.24□□□□□ -0.45
MBD1-205ENST00000353909 HIST1H1BP16401 226 aaKnown RBP12.24□□□□□ -0.45
MBD1-205ENST00000353909 ADMP35318 185 aa12.24□□□□□ -0.45
MBD1-205ENST00000353909 UBE2E1P51965 193 aa12.24□□□□□ -0.45
MBD1-205ENST00000353909 RPEL1Q2QD12 228 aa12.24□□□□□ -0.45
MBD1-205ENST00000353909 STXBP6Q8NFX7 210 aa12.24□□□□□ -0.45
MBD1-205ENST00000353909 C17orf77Q96MU5 243 aa12.24□□□□□ -0.45
MBD1-205ENST00000353909 ZNF586Q9NXT0 402 aa12.24□□□□□ -0.45
MBD1-205ENST00000353909 MRPL27Q9P0M9 148 aaKnown RBP12.24□□□□□ -0.45
MBD1-205ENST00000353909 F8W735 103 aaPredicted RBP12.23□□□□□ -0.45
MBD1-205ENST00000353909 IER3P46695 156 aa12.23□□□□□ -0.45
MBD1-205ENST00000353909 PRR27Q6MZM9 219 aa12.23□□□□□ -0.45
MBD1-205ENST00000353909 Q8N9W7 124 aa12.23□□□□□ -0.45
MBD1-205ENST00000353909 PACRGQ96M98 296 aaPredicted RBP12.23□□□□□ -0.45
MBD1-205ENST00000353909 OSTCQ9NRP0 149 aa12.23□□□□□ -0.45
MBD1-205ENST00000353909 GRIFINA4D1Z8 144 aa12.23□□□□□ -0.45
MBD1-205ENST00000353909 AMBPP02760 352 aa12.23□□□□□ -0.45
MBD1-205ENST00000353909 ZNF491Q8N8L2 437 aa12.23□□□□□ -0.45
MBD1-205ENST00000353909 NDUFB8O95169 186 aa12.22□□□□□ -0.45
MBD1-205ENST00000353909 PRB1P04280 392 aa12.22□□□□□ -0.45
MBD1-205ENST00000353909 IL4P05112 153 aa12.22□□□□□ -0.45
MBD1-205ENST00000353909 TAS2R60P59551 318 aa12.22□□□□□ -0.45
MBD1-205ENST00000353909 EXOC3-AS1Q8N2X6 119 aa12.22□□□□□ -0.45
MBD1-205ENST00000353909 Q9H3A6 140 aa12.22□□□□□ -0.45
MBD1-205ENST00000353909 OOSP1A8MZH6 123 aa12.22□□□□□ -0.45
MBD1-205ENST00000353909 NUPR1O60356 82 aa12.22□□□□□ -0.45
MBD1-205ENST00000353909 OR2J3O76001 311 aa12.22□□□□□ -0.45
MBD1-205ENST00000353909 YPEL3P61236 119 aaPredicted RBP12.22□□□□□ -0.45
MBD1-205ENST00000353909 COA6Q5JTJ3 125 aaKnown RBP12.22□□□□□ -0.45
MBD1-205ENST00000353909 TMEM256Q8N2U0 113 aa12.22□□□□□ -0.45
MBD1-205ENST00000353909 OR1L6Q8NGR2 347 aa12.22□□□□□ -0.45
MBD1-205ENST00000353909 TRAV8-1A0A0A6YYK1 113 aa12.21□□□□□ -0.45
MBD1-205ENST00000353909 IGHV4-61A0A0C4DH41 118 aa12.21□□□□□ -0.45
MBD1-205ENST00000353909 LINC01548A6NM66 108 aa12.21□□□□□ -0.45
MBD1-205ENST00000353909 USF2Q15853 346 aaPredicted RBP12.21□□□□□ -0.45
MBD1-205ENST00000353909 BTF3L4Q96K17 158 aa12.21□□□□□ -0.45
MBD1-205ENST00000353909 NPIPB5A8MRT5 1133 aa12.21□□□□□ -0.46
MBD1-205ENST00000353909 GNG7O60262 68 aa12.21□□□□□ -0.46
MBD1-205ENST00000353909 CENPVL3A0A0U1RRI6 287 aa12.2□□□□□ -0.46
MBD1-205ENST00000353909 ZNF705GA8MUZ8 300 aaPredicted RBP12.2□□□□□ -0.46
MBD1-205ENST00000353909 GATCO43716 136 aaKnown RBP12.2□□□□□ -0.46
MBD1-205ENST00000353909 PDLIM4P50479 330 aa12.2□□□□□ -0.46
MBD1-205ENST00000353909 TTC9CQ8N5M4 171 aa12.2□□□□□ -0.46
MBD1-205ENST00000353909 RNF125Q96EQ8 232 aa12.2□□□□□ -0.46
MBD1-205ENST00000353909 PTPN13Q12923 2485 aa12.2□□□□□ -0.46
MBD1-205ENST00000353909 FAM106CPP0CH98 169 aa12.2□□□□□ -0.46
MBD1-205ENST00000353909 TMEM183BQ1AE95 376 aa12.2□□□□□ -0.46
MBD1-205ENST00000353909 LINC00322Q6ZN03 302 aaPredicted RBP12.2□□□□□ -0.46
MBD1-205ENST00000353909 NRGNQ92686 78 aa12.2□□□□□ -0.46
MBD1-205ENST00000353909 ASCL2Q99929 193 aa12.2□□□□□ -0.46
MBD1-205ENST00000353909 MRPL18Q9H0U6 180 aaKnown RBP12.2□□□□□ -0.46
MBD1-205ENST00000353909 TBL2Q9Y4P3 447 aaKnown RBP12.2□□□□□ -0.46
MBD1-205ENST00000353909 ABCA12Q86UK0 2595 aa12.19□□□□□ -0.46
MBD1-205ENST00000353909 IGHV3OR16-8A0A075B7F1 116 aa12.19□□□□□ -0.46
MBD1-205ENST00000353909 IGHV3-35A0A0C4DH35 117 aa12.19□□□□□ -0.46
MBD1-205ENST00000353909 MRPL54Q6P161 138 aaKnown RBP12.19□□□□□ -0.46
MBD1-205ENST00000353909 NUDT10Q8NFP7 164 aa12.19□□□□□ -0.46
MBD1-205ENST00000353909 NUDT11Q96G61 164 aa12.19□□□□□ -0.46
MBD1-205ENST00000353909 C7orf69Q9H7B7 122 aa12.19□□□□□ -0.46
MBD1-205ENST00000353909 ANKRD17O75179 2603 aaKnown RBP12.19□□□□□ -0.46
MBD1-205ENST00000353909 OR2T8A6NH00 312 aa12.19□□□□□ -0.46
MBD1-205ENST00000353909 SNURFLB1AK76 121 aa12.19□□□□□ -0.46
MBD1-205ENST00000353909 TCRAP04437 139 aa12.19□□□□□ -0.46
MBD1-205ENST00000353909 BTF3P20290 206 aaKnown RBP12.19□□□□□ -0.46
MBD1-205ENST00000353909 FCGR2BP31994 310 aaPredicted RBP12.19□□□□□ -0.46
MBD1-205ENST00000353909 UBE2G1P62253 170 aa12.19□□□□□ -0.46
MBD1-205ENST00000353909 Q56UQ5 140 aa12.19□□□□□ -0.46
MBD1-205ENST00000353909 CCL19Q99731 98 aa12.19□□□□□ -0.46
MBD1-205ENST00000353909 SHANK2-AS3Q9BTD1 123 aa12.19□□□□□ -0.46
MBD1-205ENST00000353909 TOMM40O96008 361 aa12.19□□□□□ -0.46
MBD1-205ENST00000353909 BRD3OSQ6XYD6 125 aa12.19□□□□□ -0.46
MBD1-205ENST00000353909 C5orf17Q8NAS9 161 aa12.19□□□□□ -0.46
MBD1-205ENST00000353909 TMUB1Q9BVT8 246 aa12.19□□□□□ -0.46
MBD1-205ENST00000353909 C21orf62Q9NYP8 219 aa12.19□□□□□ -0.46
MBD1-205ENST00000353909 KLF12Q9Y4X4 402 aa12.19□□□□□ -0.46
MBD1-205ENST00000353909 SOX21Q9Y651 276 aaPredicted RBP12.19□□□□□ -0.46
MBD1-205ENST00000353909 NPFFO15130 113 aa12.18□□□□□ -0.46
MBD1-205ENST00000353909 ECSCRQ19T08 205 aa12.18□□□□□ -0.46
MBD1-205ENST00000353909 TMEM219Q86XT9 240 aa12.18□□□□□ -0.46
MBD1-205ENST00000353909 ATG101Q9BSB4 218 aa12.18□□□□□ -0.46
MBD1-205ENST00000353909 TP53TG3Q9ULZ0 132 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 186.1 ms