RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 DMRTA1Q5VZB9 504 aa6.87□□□□□ -1.31
TRIM55-204ENST00000353317 HIST2H2BCQ6DN03 193 aa6.87□□□□□ -1.31
TRIM55-204ENST00000353317 LCN12Q6JVE5 192 aa6.87□□□□□ -1.31
TRIM55-204ENST00000353317 Q6ZN92 141 aa6.87□□□□□ -1.31
TRIM55-204ENST00000353317 NUP35Q8NFH5 326 aa6.87□□□□□ -1.31
TRIM55-204ENST00000353317 TXN2Q99757 166 aa6.87□□□□□ -1.31
TRIM55-204ENST00000353317 CLEC7AQ9BXN2 247 aa6.87□□□□□ -1.31
TRIM55-204ENST00000353317 ZFP30Q9Y2G7 519 aa6.87□□□□□ -1.31
TRIM55-204ENST00000353317 NDUFB8O95169 186 aa6.86□□□□□ -1.31
TRIM55-204ENST00000353317 MFAP2P55001 183 aa6.86□□□□□ -1.31
TRIM55-204ENST00000353317 TNXAQ16473 311 aa6.86□□□□□ -1.31
TRIM55-204ENST00000353317 PATE2Q6UY27 113 aa6.86□□□□□ -1.31
TRIM55-204ENST00000353317 C19orf35Q6ZS72 473 aa6.86□□□□□ -1.31
TRIM55-204ENST00000353317 NUDT10Q8NFP7 164 aa6.86□□□□□ -1.31
TRIM55-204ENST00000353317 WIPF2Q8TF74 440 aaPredicted RBP6.86□□□□□ -1.31
TRIM55-204ENST00000353317 CACNG8Q8WXS5 425 aa6.86□□□□□ -1.31
TRIM55-204ENST00000353317 BORCS7Q96B45 105 aa6.86□□□□□ -1.31
TRIM55-204ENST00000353317 NUDT11Q96G61 164 aa6.86□□□□□ -1.31
TRIM55-204ENST00000353317 HARBI1Q96MB7 349 aa6.86□□□□□ -1.31
TRIM55-204ENST00000353317 BPESC1Q9GZL8 116 aa6.86□□□□□ -1.31
TRIM55-204ENST00000353317 FNDC4Q9H6D8 234 aaPredicted RBP6.86□□□□□ -1.31
TRIM55-204ENST00000353317 MRPL27Q9P0M9 148 aaKnown RBP6.86□□□□□ -1.31
TRIM55-204ENST00000353317 FASNP49327 2511 aaKnown RBP6.86□□□□□ -1.31
TRIM55-204ENST00000353317 VWC2LB2RUY7 222 aa6.86□□□□□ -1.31
TRIM55-204ENST00000353317 IGHV1-8P0DP01 117 aa6.86□□□□□ -1.31
TRIM55-204ENST00000353317 REG1BP48304 166 aa6.86□□□□□ -1.31
TRIM55-204ENST00000353317 FAM231DQ6ZW35 169 aa6.86□□□□□ -1.31
TRIM55-204ENST00000353317 ZNF329Q86UD4 541 aa6.86□□□□□ -1.31
TRIM55-204ENST00000353317 RBM14Q96PK6 669 aaKnown RBP6.86□□□□□ -1.31
TRIM55-204ENST00000353317 SSBP4Q9BWG4 385 aaPredicted RBP6.86□□□□□ -1.31
TRIM55-204ENST00000353317 MRPL20Q9BYC9 149 aaKnown RBP6.86□□□□□ -1.31
TRIM55-204ENST00000353317 PPP1R14DQ9NXH3 145 aa6.86□□□□□ -1.31
TRIM55-204ENST00000353317 LAMTOR2Q9Y2Q5 125 aa6.86□□□□□ -1.31
TRIM55-204ENST00000353317 ABCA1O95477 2261 aa6.86□□□□□ -1.31
TRIM55-204ENST00000353317 PEX7O00628 323 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 GPR6P46095 362 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-204ENST00000353317 HNRNPA3P51991 378 aaKnown RBP6.85□□□□□ -1.31
TRIM55-204ENST00000353317 RPL8P62917 257 aaKnown RBP6.85□□□□□ -1.31
TRIM55-204ENST00000353317 ERHP84090 104 aaKnown RBP6.85□□□□□ -1.31
TRIM55-204ENST00000353317 WT1-ASQ06250 92 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 PRR31Q5SQ13 230 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 PRR27Q6MZM9 219 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 RASL11AQ6T310 242 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 ZNF833PQ6ZTB9 187 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 LY6G5BQ8NDX9 201 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 OSR1Q8TAX0 266 aaPredicted RBP6.85□□□□□ -1.31
TRIM55-204ENST00000353317 PAXXQ9BUH6 204 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 GAL3ST2Q9H3Q3 398 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 IGKV1D-37A0A075B6S9 117 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 PPIAL4CA0A0B4J2A2 164 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 CGB1A6NKQ9 187 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 HIGD1CA8MV81 97 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 H0YJW9 148 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 CORTO00230 105 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 COX7A2P2O60397 106 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 PPIAL4GP0DN37 164 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 C10orf55Q5SWW7 151 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 C10orf113Q5VZT2 155 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 EBLN2Q6P2I7 272 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 NPIPB3Q92617 1050 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 ST6GALNAC6Q969X2 333 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 FXYD5Q96DB9 178 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 SGK494Q96LW2 274 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 MRPL36Q9P0J6 103 aaKnown RBP6.85□□□□□ -1.31
TRIM55-204ENST00000353317 NAV2Q8IVL1 2488 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 CSPG4Q6UVK1 2322 aa6.85□□□□□ -1.31
TRIM55-204ENST00000353317 NAV3Q8IVL0 2385 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 HSBP1O75506 76 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 CAMPP49913 170 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 LMO4P61968 165 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 ARF6P62330 175 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 GNG5P63218 68 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 OR8B3Q8NGG8 313 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 C8orf46Q8TAG6 207 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 GRAMD2BQ96HH9 432 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 OR8B2Q96RD0 313 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 CCL19Q99731 98 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 ALKBH7Q9BT30 221 aaPredicted RBP6.84□□□□□ -1.31
TRIM55-204ENST00000353317 C7orf69Q9H7B7 122 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 TNFRSF19Q9NS68 423 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 A0A1W2PN81 502 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 TCRBV4S1A1TA0A5B7 111 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 FAM181BA6NEQ2 426 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 PLA2G2AP14555 144 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 TSPOP30536 169 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 PAX2Q02962 417 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 RUSC1-AS1Q66K80 236 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 LHFPL4Q7Z7J7 247 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 KLHDC1Q8N7A1 406 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 OR5AN1Q8NGI8 311 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 FLYWCH2Q96CP2 140 aaKnown RBP6.84□□□□□ -1.31
TRIM55-204ENST00000353317 TIMD4Q96H15 378 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 RITA1Q96K30 269 aa6.84□□□□□ -1.31
TRIM55-204ENST00000353317 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.84□□□□□ -1.31
TRIM55-204ENST00000353317 C2orf70A6NJV1 201 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 INS-IGF2F8WCM5 200 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 M0R2Z0 102 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 TCF21O43680 179 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 APOA2P02652 100 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 MYCNOSP40205 109 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms