RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 Q86TA4 180 aa19.55■□□□□ 0.72
CPNE1-202ENST00000352393 PPP1R14DQ9NXH3 145 aa19.55■□□□□ 0.72
CPNE1-202ENST00000352393 CLEC5AQ9NY25 188 aa19.55■□□□□ 0.72
CPNE1-202ENST00000352393 JKAMPQ9P055 326 aa19.55■□□□□ 0.72
CPNE1-202ENST00000352393 F11RQ9Y624 299 aaKnown RBP19.55■□□□□ 0.72
CPNE1-202ENST00000352393 TEX22C9J3V5 150 aa19.55■□□□□ 0.72
CPNE1-202ENST00000352393 NPIPB6E9PJ23 425 aa19.55■□□□□ 0.72
CPNE1-202ENST00000352393 RBPMS2Q6ZRY4 209 aaKnown RBP19.55■□□□□ 0.72
CPNE1-202ENST00000352393 TNFRSF14Q92956 283 aa19.55■□□□□ 0.72
CPNE1-202ENST00000352393 PGLYRP4Q96LB8 373 aa19.55■□□□□ 0.72
CPNE1-202ENST00000352393 ROS1P08922 2347 aa19.55■□□□□ 0.72
CPNE1-202ENST00000352393 IGLL1P15814 213 aa19.54■□□□□ 0.72
CPNE1-202ENST00000352393 TMEM70Q9BUB7 260 aa19.54■□□□□ 0.72
CPNE1-202ENST00000352393 GSX1Q9H4S2 264 aaPredicted RBP19.54■□□□□ 0.72
CPNE1-202ENST00000352393 C1RLQ9NZP8 487 aa19.54■□□□□ 0.72
CPNE1-202ENST00000352393 HIGD1AQ9Y241 93 aa19.54■□□□□ 0.72
CPNE1-202ENST00000352393 PRRG2O14669 202 aa19.54■□□□□ 0.72
CPNE1-202ENST00000352393 PRSS33Q8NF86 280 aa19.54■□□□□ 0.72
CPNE1-202ENST00000352393 CHCHD1Q96BP2 118 aaKnown RBP19.54■□□□□ 0.72
CPNE1-202ENST00000352393 OTORQ9NRC9 128 aa19.54■□□□□ 0.72
CPNE1-202ENST00000352393 FAM231BA6NCW3 169 aa19.53■□□□□ 0.72
CPNE1-202ENST00000352393 SH2D7A6NKC9 451 aaPredicted RBP19.53■□□□□ 0.72
CPNE1-202ENST00000352393 IGLV1-47P01700 117 aa19.53■□□□□ 0.72
CPNE1-202ENST00000352393 FOXA3P55318 350 aaPredicted RBP19.53■□□□□ 0.72
CPNE1-202ENST00000352393 TMEM14CQ9P0S9 112 aa19.53■□□□□ 0.72
CPNE1-202ENST00000352393 CRXO43186 299 aaPredicted RBP19.52■□□□□ 0.72
CPNE1-202ENST00000352393 SIAH2O43255 324 aa19.52■□□□□ 0.72
CPNE1-202ENST00000352393 IGLC1P0CG04 106 aa19.52■□□□□ 0.72
CPNE1-202ENST00000352393 DYNLRB1Q9NP97 96 aa19.52■□□□□ 0.72
CPNE1-202ENST00000352393 ZNF835Q9Y2P0 537 aa19.52■□□□□ 0.72
CPNE1-202ENST00000352393 MALRD1Q5VYJ5 2156 aa19.52■□□□□ 0.72
CPNE1-202ENST00000352393 IGHV1-24A0A0C4DH33 117 aa19.52■□□□□ 0.72
CPNE1-202ENST00000352393 M0QZ24 198 aa19.52■□□□□ 0.72
CPNE1-202ENST00000352393 HOXB4P17483 251 aaPredicted RBP19.52■□□□□ 0.72
CPNE1-202ENST00000352393 DAZAP1Q96EP5 407 aaKnown RBP19.52■□□□□ 0.72
CPNE1-202ENST00000352393 CD24P25063 80 aa19.51■□□□□ 0.71
CPNE1-202ENST00000352393 OR4F17Q8NGA8 305 aa19.51■□□□□ 0.71
CPNE1-202ENST00000352393 IGHV1-3A0A0C4DH29 117 aa19.51■□□□□ 0.71
CPNE1-202ENST00000352393 VSTM5A8MXK1 200 aa19.51■□□□□ 0.71
CPNE1-202ENST00000352393 IGLV2-11P01706 119 aa19.51■□□□□ 0.71
CPNE1-202ENST00000352393 PSG1P11464 419 aa19.51■□□□□ 0.71
CPNE1-202ENST00000352393 LYZP61626 148 aa19.51■□□□□ 0.71
CPNE1-202ENST00000352393 C16orf54Q6UWD8 224 aa19.51■□□□□ 0.71
CPNE1-202ENST00000352393 SMG1Q96Q15 3661 aaKnown RBP19.5■□□□□ 0.71
CPNE1-202ENST00000352393 LOC102724200A0A096LPH7 203 aaPredicted RBP19.5■□□□□ 0.71
CPNE1-202ENST00000352393 SHISA9B4DS77 424 aa19.5■□□□□ 0.71
CPNE1-202ENST00000352393 HINT1P49773 126 aaPredicted RBP19.5■□□□□ 0.71
CPNE1-202ENST00000352393 DLX1P56177 255 aa19.5■□□□□ 0.71
CPNE1-202ENST00000352393 DMRTA1Q5VZB9 504 aa19.5■□□□□ 0.71
CPNE1-202ENST00000352393 PPP1R27Q86WC6 154 aa19.5■□□□□ 0.71
CPNE1-202ENST00000352393 ORAOV1Q8WV07 137 aa19.5■□□□□ 0.71
CPNE1-202ENST00000352393 SLC25A39Q9BZJ4 359 aaPredicted RBP19.5■□□□□ 0.71
CPNE1-202ENST00000352393 PKDREJQ9NTG1 2253 aa19.5■□□□□ 0.71
CPNE1-202ENST00000352393 CEP250Q9BV73 2442 aa19.5■□□□□ 0.71
CPNE1-202ENST00000352393 TRAV8-1A0A0A6YYK1 113 aa19.49■□□□□ 0.71
CPNE1-202ENST00000352393 APOHP02749 345 aaPredicted RBP19.49■□□□□ 0.71
CPNE1-202ENST00000352393 E7EQL1 145 aa19.49■□□□□ 0.71
CPNE1-202ENST00000352393 OVOL3O00110 214 aa19.49■□□□□ 0.71
CPNE1-202ENST00000352393 ZGRF1Q86YA3 2104 aa19.49■□□□□ 0.71
CPNE1-202ENST00000352393 IGHV1-69-2A0A0G2JMI3 117 aa19.48■□□□□ 0.71
CPNE1-202ENST00000352393 TRBV6-1A0A0K0K1D8 114 aa19.48■□□□□ 0.71
CPNE1-202ENST00000352393 I3L2K1 104 aa19.48■□□□□ 0.71
CPNE1-202ENST00000352393 CIARTQ8N365 385 aaPredicted RBP19.48■□□□□ 0.71
CPNE1-202ENST00000352393 NDFIP1Q9BT67 221 aa19.48■□□□□ 0.71
CPNE1-202ENST00000352393 INSIG2Q9Y5U4 225 aa19.48■□□□□ 0.71
CPNE1-202ENST00000352393 OR4C46A6NHA9 309 aa19.48■□□□□ 0.71
CPNE1-202ENST00000352393 COL8A1P27658 744 aa19.48■□□□□ 0.71
CPNE1-202ENST00000352393 RBPJQ06330 500 aa19.48■□□□□ 0.71
CPNE1-202ENST00000352393 LINC00173Q6ZV60 143 aa19.48■□□□□ 0.71
CPNE1-202ENST00000352393 Q71RC1 249 aaPredicted RBP19.48■□□□□ 0.71
CPNE1-202ENST00000352393 MUC15Q8N387 334 aa19.48■□□□□ 0.71
CPNE1-202ENST00000352393 BUB1B-PAK6H3BSN5 160 aa19.47■□□□□ 0.71
CPNE1-202ENST00000352393 SYS1-DBNDD2H3BUS1 97 aa19.47■□□□□ 0.71
CPNE1-202ENST00000352393 HAX1O00165 279 aa19.47■□□□□ 0.71
CPNE1-202ENST00000352393 SRSF12Q8WXF0 261 aaKnown RBP19.47■□□□□ 0.71
CPNE1-202ENST00000352393 SH3BGRL2Q9UJC5 107 aa19.47■□□□□ 0.71
CPNE1-202ENST00000352393 DMXL1Q9Y485 3027 aa19.47■□□□□ 0.71
CPNE1-202ENST00000352393 KLK10O43240 276 aa19.46■□□□□ 0.71
CPNE1-202ENST00000352393 PRB3Q04118 309 aaPredicted RBP19.46■□□□□ 0.71
CPNE1-202ENST00000352393 TCF15Q12870 199 aa19.46■□□□□ 0.71
CPNE1-202ENST00000352393 GOLT1AQ6ZVE7 132 aa19.46■□□□□ 0.71
CPNE1-202ENST00000352393 EXOC3-AS1Q8N2X6 119 aa19.46■□□□□ 0.71
CPNE1-202ENST00000352393 FBXL15Q9H469 300 aa19.46■□□□□ 0.71
CPNE1-202ENST00000352393 RALYQ9UKM9 306 aaKnown RBP19.46■□□□□ 0.71
CPNE1-202ENST00000352393 CHEK1O14757 476 aa19.46■□□□□ 0.71
CPNE1-202ENST00000352393 MGAQ8IWI9 3026 aa19.45■□□□□ 0.7
CPNE1-202ENST00000352393 TCF21O43680 179 aa19.45■□□□□ 0.7
CPNE1-202ENST00000352393 LEPROTL1O95214 131 aa19.45■□□□□ 0.7
CPNE1-202ENST00000352393 PRNTQ86SH4 94 aa19.45■□□□□ 0.7
CPNE1-202ENST00000352393 TMEM190Q8WZ59 177 aa19.45■□□□□ 0.7
CPNE1-202ENST00000352393 ST20Q9HBF5 79 aa19.45■□□□□ 0.7
CPNE1-202ENST00000352393 ZNF785A8K8V0 405 aa19.45■□□□□ 0.7
CPNE1-202ENST00000352393 UNQ5815/PRO19632Q6UWF5 114 aa19.45■□□□□ 0.7
CPNE1-202ENST00000352393 RASL11BQ9BPW5 248 aa19.45■□□□□ 0.7
CPNE1-202ENST00000352393 IGKV1-17P01599 117 aa19.44■□□□□ 0.7
CPNE1-202ENST00000352393 COX11Q9Y6N1 276 aa19.43■□□□□ 0.7
CPNE1-202ENST00000352393 RELQ04864 619 aaPredicted RBP19.43■□□□□ 0.7
CPNE1-202ENST00000352393 TOX4O94842 621 aa19.42■□□□□ 0.7
CPNE1-202ENST00000352393 LIPFP07098 398 aa19.42■□□□□ 0.7
CPNE1-202ENST00000352393 OR5AL1P0C617 328 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms