RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 FAM90A27PA6NNH2 459 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 BUB1B-PAK6H3BSN5 160 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 IGLV2-11P01706 119 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 ESDP10768 282 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 USF1P22415 310 aaPredicted RBP4.79□□□□□ -1.64
CLCN3-201ENST00000347613 G0S2P27469 103 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 C1orf194Q5T5A4 169 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 LINC00311Q8N616 119 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 BTF3L4Q96K17 158 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 WNT10AQ9GZT5 417 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 ZNF586Q9NXT0 402 aa4.79□□□□□ -1.64
CLCN3-201ENST00000347613 SPTAN1Q13813 2472 aaKnown RBP4.79□□□□□ -1.64
CLCN3-201ENST00000347613 PGPA6NDG6 321 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 NKX6-3A6NJ46 265 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 INS-IGF2F8WCM5 200 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 TSTD3H0UI37 97 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 LY6LH3BQJ8 138 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 MT-CO2P00403 227 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 RAB31Q13636 194 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 LRRC10Q5BKY1 277 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 Q6ZVH6 145 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 ZNF575Q86XF7 245 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 PDPNQ86YL7 162 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 CIARTQ8N365 385 aaPredicted RBP4.78□□□□□ -1.64
CLCN3-201ENST00000347613 TSKUQ8WUA8 353 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 MCRIP2Q9BUT9 160 aaKnown RBP4.78□□□□□ -1.64
CLCN3-201ENST00000347613 MLST8Q9BVC4 326 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 TNFRSF19Q9NS68 423 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 KAAG1Q9UBP8 84 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 TBL2Q9Y4P3 447 aaKnown RBP4.78□□□□□ -1.64
CLCN3-201ENST00000347613 PEX7O00628 323 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 COX7A2P2O60397 106 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 APOA2P02652 100 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 PSG1P11464 419 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 ZNF138P52744 262 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 ERHP84090 104 aaKnown RBP4.78□□□□□ -1.64
CLCN3-201ENST00000347613 RPL19P84098 196 aaKnown RBP4.78□□□□□ -1.64
CLCN3-201ENST00000347613 TOMM20LQ6UXN7 152 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 TMEM186Q96B77 213 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 TXNDC17Q9BRA2 123 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 GNB1LQ9BYB4 327 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 OSTCQ9NRP0 149 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 TMEM167BQ9NRX6 74 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 HILPDAQ9Y5L2 63 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 LY96Q9Y6Y9 160 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 IGSF10Q6WRI0 2623 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 ZNF705FA8MVS1 300 aaPredicted RBP4.78□□□□□ -1.64
CLCN3-201ENST00000347613 I3L2K1 104 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 IGKV1-17P01599 117 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 ZNF705DP0CH99 300 aaPredicted RBP4.78□□□□□ -1.64
CLCN3-201ENST00000347613 ZNF705BP0CI00 300 aaPredicted RBP4.78□□□□□ -1.64
CLCN3-201ENST00000347613 PMCHP20382 165 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 Q0VG73 95 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 TIGITQ495A1 244 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 TEX43Q6ZNM6 134 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 C18orf32Q8TCD1 76 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 CACNG8Q8WXS5 425 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 NRN1Q9NPD7 142 aa4.78□□□□□ -1.64
CLCN3-201ENST00000347613 IGHV3OR16-8A0A075B7F1 116 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 HIGD1CA8MV81 97 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 F8W735 103 aaPredicted RBP4.77□□□□□ -1.65
CLCN3-201ENST00000347613 IGHV3-23P01764 117 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 CAMPP49913 170 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 CRIP1P50238 77 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 FOXA3P55318 350 aaPredicted RBP4.77□□□□□ -1.65
CLCN3-201ENST00000347613 ARF6P62330 175 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 ADORA2A-AS1P86434 159 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 NDPQ00604 133 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 EBLN2Q6P2I7 272 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 BAGE3Q86Y29 109 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 BAGE2Q86Y30 109 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 C2orf88Q9BSF0 95 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 DYNLRB1Q9NP97 96 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 K7ENP7 123 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 IGLC1P0CG04 106 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 APOBEC3AP31941 199 aaPredicted RBP4.77□□□□□ -1.65
CLCN3-201ENST00000347613 CTRLP40313 264 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 TFPI2P48307 235 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 TAS2R60P59551 318 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 ZNF672Q499Z4 452 aaPredicted RBP4.77□□□□□ -1.65
CLCN3-201ENST00000347613 IGFL4Q6B9Z1 124 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 PPP1R27Q86WC6 154 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 ZNF479Q96JC4 524 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 EPDR1Q9UM22 224 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 K7EIM0 57 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 TIMM23O14925 209 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 C3orf79P0CE67 100 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 RAB4AP20338 218 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 KRTDAPP60985 99 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 FAM120AOSQ5T036 256 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 TMEM116Q8NCL8 245 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 INSIG2Q9Y5U4 225 aa4.77□□□□□ -1.65
CLCN3-201ENST00000347613 PPIAL4CA0A0B4J2A2 164 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 IZUMO1RA6ND01 250 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 ZNF253O75346 499 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 NBEAP1P0C6P0 100 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 PPIAL4GP0DN37 164 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 ZFP36P26651 326 aaKnown RBP4.76□□□□□ -1.65
CLCN3-201ENST00000347613 PRSS57Q6UWY2 283 aa4.76□□□□□ -1.65
CLCN3-201ENST00000347613 MUC15Q8N387 334 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 203 ms