RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ZNF503-AS2A6NEH8 195 aa8.91□□□□□ -0.98
CLCN6-202ENST00000346436 ZFP30Q9Y2G7 519 aa8.91□□□□□ -0.98
CLCN6-202ENST00000346436 U3KQA8 63 aa8.91□□□□□ -0.98
CLCN6-202ENST00000346436 IGHV1-3A0A0C4DH29 117 aa8.91□□□□□ -0.98
CLCN6-202ENST00000346436 LOC389332A0A1B0GUA5 103 aa8.91□□□□□ -0.98
CLCN6-202ENST00000346436 MT-ND6P03923 174 aa8.91□□□□□ -0.98
CLCN6-202ENST00000346436 DAD1P61803 113 aa8.91□□□□□ -0.98
CLCN6-202ENST00000346436 CACNG7P62955 275 aa8.91□□□□□ -0.98
CLCN6-202ENST00000346436 OR8A1Q8NGG7 326 aa8.91□□□□□ -0.98
CLCN6-202ENST00000346436 PGLYRP4Q96LB8 373 aa8.91□□□□□ -0.98
CLCN6-202ENST00000346436 C5orf64Q2M2E5 130 aa8.91□□□□□ -0.98
CLCN6-202ENST00000346436 MORN2Q502X0 79 aa8.91□□□□□ -0.98
CLCN6-202ENST00000346436 RNASE7Q9H1E1 156 aaKnown RBP8.91□□□□□ -0.98
CLCN6-202ENST00000346436 SHANK1Q9Y566 2161 aa8.91□□□□□ -0.98
CLCN6-202ENST00000346436 TMEM200BQ69YZ2 307 aa8.91□□□□□ -0.98
CLCN6-202ENST00000346436 FOXL2NBQ6ZUU3 175 aa8.91□□□□□ -0.98
CLCN6-202ENST00000346436 CIARTQ8N365 385 aaPredicted RBP8.91□□□□□ -0.98
CLCN6-202ENST00000346436 TMEM70Q9BUB7 260 aa8.91□□□□□ -0.98
CLCN6-202ENST00000346436 PCNX3Q9H6A9 2034 aa8.9□□□□□ -0.98
CLCN6-202ENST00000346436 C15orf32Q32M92 178 aa8.9□□□□□ -0.98
CLCN6-202ENST00000346436 DOCK11Q5JSL3 2073 aa8.9□□□□□ -0.98
CLCN6-202ENST00000346436 TRAV3A0A0B4J244 114 aa8.9□□□□□ -0.98
CLCN6-202ENST00000346436 ADMP35318 185 aa8.9□□□□□ -0.98
CLCN6-202ENST00000346436 OR10J3Q5JRS4 329 aa8.9□□□□□ -0.98
CLCN6-202ENST00000346436 C9orf66Q5T8R8 295 aa8.9□□□□□ -0.98
CLCN6-202ENST00000346436 FAM19A2Q8N3H0 131 aa8.9□□□□□ -0.98
CLCN6-202ENST00000346436 LINC00469Q8N7U9 141 aa8.9□□□□□ -0.98
CLCN6-202ENST00000346436 BET1LQ9NYM9 111 aa8.9□□□□□ -0.98
CLCN6-202ENST00000346436 TSSC4Q9Y5U2 329 aaPredicted RBP8.9□□□□□ -0.98
CLCN6-202ENST00000346436 HEATR1Q9H583 2144 aaKnown RBP8.9□□□□□ -0.98
CLCN6-202ENST00000346436 DOCK10Q96BY6 2186 aa8.9□□□□□ -0.98
CLCN6-202ENST00000346436 VENTXO95231 258 aa8.9□□□□□ -0.98
CLCN6-202ENST00000346436 NUDT11Q96G61 164 aa8.9□□□□□ -0.98
CLCN6-202ENST00000346436 AKAP6Q13023 2319 aa8.9□□□□□ -0.98
CLCN6-202ENST00000346436 TRBV20OR9-2A0A075B6H5 130 aa8.9□□□□□ -0.99
CLCN6-202ENST00000346436 SPATA31B1PQ5VZV4 182 aa8.9□□□□□ -0.99
CLCN6-202ENST00000346436 MUC6Q6W4X9 2439 aa8.9□□□□□ -0.99
CLCN6-202ENST00000346436 MBD3L1Q8WWY6 194 aa8.89□□□□□ -0.99
CLCN6-202ENST00000346436 NXT2Q9NPJ8 142 aaKnown RBP8.89□□□□□ -0.99
CLCN6-202ENST00000346436 ETV2O00321 342 aaPredicted RBP8.89□□□□□ -0.99
CLCN6-202ENST00000346436 FOXA3P55318 350 aaPredicted RBP8.89□□□□□ -0.99
CLCN6-202ENST00000346436 LINC00473A8K010 186 aa8.89□□□□□ -0.99
CLCN6-202ENST00000346436 SLC25A20O43772 301 aa8.89□□□□□ -0.99
CLCN6-202ENST00000346436 RPL36AP83881 106 aaKnown RBP8.89□□□□□ -0.99
CLCN6-202ENST00000346436 OCC1Q8TAD7 63 aa8.89□□□□□ -0.99
CLCN6-202ENST00000346436 RPL36ALQ969Q0 106 aaKnown RBP8.89□□□□□ -0.99
CLCN6-202ENST00000346436 PLA2G2EQ9NZK7 142 aa8.89□□□□□ -0.99
CLCN6-202ENST00000346436 TOMM7Q9P0U1 55 aa8.89□□□□□ -0.99
CLCN6-202ENST00000346436 PCDH15Q96QU1 1955 aa8.89□□□□□ -0.99
CLCN6-202ENST00000346436 CTAG1AP78358 180 aa8.89□□□□□ -0.99
CLCN6-202ENST00000346436 FAM71F2Q6NXP2 309 aa8.89□□□□□ -0.99
CLCN6-202ENST00000346436 OR52E5Q8NH55 327 aa8.89□□□□□ -0.99
CLCN6-202ENST00000346436 CGB3P0DN86 165 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 CNTFRP26992 372 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 Q6P435 159 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 ZNF329Q86UD4 541 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 DKK4Q9UBT3 224 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 SERF1AO75920 110 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 C9orf139Q6ZV77 190 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 KLK5Q9Y337 293 aaPredicted RBP8.88□□□□□ -0.99
CLCN6-202ENST00000346436 CA1P00915 261 aaPredicted RBP8.88□□□□□ -0.99
CLCN6-202ENST00000346436 FAM90A2PQ658T7 463 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 Q6AWC8 147 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 GTF2H5Q6ZYL4 71 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 IGHV3OR16-8A0A075B7F1 116 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 BUB1B-PAK6H3BSN5 160 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 HOXA3O43365 443 aaPredicted RBP8.88□□□□□ -0.99
CLCN6-202ENST00000346436 ELANEP08246 267 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 DUTP33316 252 aaKnown RBP8.88□□□□□ -0.99
CLCN6-202ENST00000346436 COTL1Q14019 142 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 C10orf91Q5T1B1 145 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 TMEM170AQ8WVE7 144 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 TEX48A0A1B0GUV7 120 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 RBMY1BA6NDE4 496 aaKnown RBP8.88□□□□□ -0.99
CLCN6-202ENST00000346436 RBMY1EA6NEQ0 496 aaKnown RBP8.88□□□□□ -0.99
CLCN6-202ENST00000346436 RBMY1DP0C7P1 496 aaKnown RBP8.88□□□□□ -0.99
CLCN6-202ENST00000346436 RBMY1A1P0DJD3 496 aaKnown RBP8.88□□□□□ -0.99
CLCN6-202ENST00000346436 RBMY1CP0DJD4 496 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 PAX9P55771 341 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 NEUROG1Q92886 237 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 IL36BQ9NZH7 164 aa8.88□□□□□ -0.99
CLCN6-202ENST00000346436 PKDREJQ9NTG1 2253 aa8.87□□□□□ -0.99
CLCN6-202ENST00000346436 CFHR2P36980 270 aa8.87□□□□□ -0.99
CLCN6-202ENST00000346436 MRAPQ8TCY5 172 aa8.87□□□□□ -0.99
CLCN6-202ENST00000346436 RCHY1Q96PM5 261 aa8.87□□□□□ -0.99
CLCN6-202ENST00000346436 DAZ1Q9NQZ3 744 aaKnown RBP8.87□□□□□ -0.99
CLCN6-202ENST00000346436 FAM90A9PA6NNJ1 464 aa8.87□□□□□ -0.99
CLCN6-202ENST00000346436 RNASE1P07998 156 aaKnown RBP8.87□□□□□ -0.99
CLCN6-202ENST00000346436 KIR3DL3Q8N743 410 aa8.87□□□□□ -0.99
CLCN6-202ENST00000346436 Q8NFD4 153 aa8.87□□□□□ -0.99
CLCN6-202ENST00000346436 FABP5P3A8MUU1 101 aa8.87□□□□□ -0.99
CLCN6-202ENST00000346436 DNAL4O96015 105 aa8.87□□□□□ -0.99
CLCN6-202ENST00000346436 IL15RAQ13261 267 aa8.87□□□□□ -0.99
CLCN6-202ENST00000346436 LYPD6Q86Y78 171 aa8.87□□□□□ -0.99
CLCN6-202ENST00000346436 TREML4Q6UXN2 200 aa8.87□□□□□ -0.99
CLCN6-202ENST00000346436 OR10W1Q8NGF6 305 aa8.87□□□□□ -0.99
CLCN6-202ENST00000346436 ST6GALNAC6Q969X2 333 aa8.87□□□□□ -0.99
CLCN6-202ENST00000346436 C14orf144Q96I85 54 aa8.87□□□□□ -0.99
CLCN6-202ENST00000346436 OTORQ9NRC9 128 aa8.87□□□□□ -0.99
CLCN6-202ENST00000346436 TRGV1A0A0A0MS02 117 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms