RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 RARRES2Q99969 163 aa10.52□□□□□ -0.73
HMGN3-202ENST00000344726 CCDC32Q9BV29 185 aa10.52□□□□□ -0.73
HMGN3-202ENST00000344726 WDR12Q9GZL7 423 aaKnown RBP10.52□□□□□ -0.73
HMGN3-202ENST00000344726 CCSO14618 274 aa10.51□□□□□ -0.73
HMGN3-202ENST00000344726 SCGB1D2O95969 90 aa10.51□□□□□ -0.73
HMGN3-202ENST00000344726 FABP1P07148 127 aa10.51□□□□□ -0.73
HMGN3-202ENST00000344726 DEFB1P60022 68 aa10.51□□□□□ -0.73
HMGN3-202ENST00000344726 SMIM8Q96KF7 97 aa10.51□□□□□ -0.73
HMGN3-202ENST00000344726 SEC22CQ9BRL7 303 aa10.51□□□□□ -0.73
HMGN3-202ENST00000344726 NUDT15Q9NV35 164 aa10.51□□□□□ -0.73
HMGN3-202ENST00000344726 TBC1D24Q9ULP9 559 aa10.51□□□□□ -0.73
HMGN3-202ENST00000344726 RCL1Q9Y2P8 373 aaKnown RBP10.51□□□□□ -0.73
HMGN3-202ENST00000344726 A6NHS1 94 aa10.5□□□□□ -0.73
HMGN3-202ENST00000344726 SOCS3O14543 225 aa10.5□□□□□ -0.73
HMGN3-202ENST00000344726 ATF4P18848 351 aaPredicted RBP10.5□□□□□ -0.73
HMGN3-202ENST00000344726 NUP62P37198 522 aaPredicted RBP10.5□□□□□ -0.73
HMGN3-202ENST00000344726 AKR1C1Q04828 323 aa10.5□□□□□ -0.73
HMGN3-202ENST00000344726 TMEM14EPQ6UXP3 125 aa10.5□□□□□ -0.73
HMGN3-202ENST00000344726 LINC00476Q8WZB0 136 aa10.5□□□□□ -0.73
HMGN3-202ENST00000344726 C17orf77Q96MU5 243 aa10.5□□□□□ -0.73
HMGN3-202ENST00000344726 SEPSECSQ9HD40 501 aaKnown RBP10.5□□□□□ -0.73
HMGN3-202ENST00000344726 GSKIPQ9P0R6 139 aa10.5□□□□□ -0.73
HMGN3-202ENST00000344726 A6NJY4 79 aa10.49□□□□□ -0.73
HMGN3-202ENST00000344726 DEFB4AO15263 64 aa10.49□□□□□ -0.73
HMGN3-202ENST00000344726 MBPP02686 304 aaPredicted RBP10.49□□□□□ -0.73
HMGN3-202ENST00000344726 METTL15P1P0C7V9 234 aa10.49□□□□□ -0.73
HMGN3-202ENST00000344726 SPP1P10451 314 aa10.49□□□□□ -0.73
HMGN3-202ENST00000344726 SNRPD3P62318 126 aaKnown RBP10.49□□□□□ -0.73
HMGN3-202ENST00000344726 C1orf194Q5T5A4 169 aa10.49□□□□□ -0.73
HMGN3-202ENST00000344726 GDF5OSQ5U4N7 250 aa10.49□□□□□ -0.73
HMGN3-202ENST00000344726 MORN3Q6PF18 240 aaPredicted RBP10.49□□□□□ -0.73
HMGN3-202ENST00000344726 CEMP1Q6PRD7 247 aaPredicted RBP10.49□□□□□ -0.73
HMGN3-202ENST00000344726 LINC00299Q6ZSB3 139 aa10.49□□□□□ -0.73
HMGN3-202ENST00000344726 TMEM144Q7Z5S9 345 aa10.49□□□□□ -0.73
HMGN3-202ENST00000344726 C11orf68Q9H3H3 251 aaKnown RBP10.49□□□□□ -0.73
HMGN3-202ENST00000344726 CLEC5AQ9NY25 188 aa10.49□□□□□ -0.73
HMGN3-202ENST00000344726 VPS13DQ5THJ4 4388 aa10.48□□□□□ -0.73
HMGN3-202ENST00000344726 SMCO3A2RU48 225 aa10.48□□□□□ -0.73
HMGN3-202ENST00000344726 RRAS2P62070 204 aaPredicted RBP10.48□□□□□ -0.73
HMGN3-202ENST00000344726 ARL16Q0P5N6 197 aa10.48□□□□□ -0.73
HMGN3-202ENST00000344726 Q8NAQ8 132 aa10.48□□□□□ -0.73
HMGN3-202ENST00000344726 CSNK1G2-AS1Q8NCQ2 148 aa10.48□□□□□ -0.73
HMGN3-202ENST00000344726 ZNF431Q8TF32 576 aaPredicted RBP10.48□□□□□ -0.73
HMGN3-202ENST00000344726 PPP1R14BQ96C90 147 aa10.48□□□□□ -0.73
HMGN3-202ENST00000344726 SLC25A32Q9H2D1 315 aa10.48□□□□□ -0.73
HMGN3-202ENST00000344726 FBXL17Q9UF56 701 aa10.48□□□□□ -0.73
HMGN3-202ENST00000344726 PFDN2Q9UHV9 154 aa10.48□□□□□ -0.73
HMGN3-202ENST00000344726 FRAS1Q86XX4 4008 aa10.47□□□□□ -0.73
HMGN3-202ENST00000344726 C7orf66A4D0T2 115 aa10.47□□□□□ -0.73
HMGN3-202ENST00000344726 NUPR2A6NF83 97 aa10.47□□□□□ -0.73
HMGN3-202ENST00000344726 ZNF98A6NK75 572 aa10.47□□□□□ -0.73
HMGN3-202ENST00000344726 H3BMM0 161 aa10.47□□□□□ -0.73
HMGN3-202ENST00000344726 CFDP00746 253 aaPredicted RBP10.47□□□□□ -0.73
HMGN3-202ENST00000344726 H2AFB2P0C5Z0 115 aa10.47□□□□□ -0.73
HMGN3-202ENST00000344726 ORM2P19652 201 aa10.47□□□□□ -0.73
HMGN3-202ENST00000344726 TAS2R30P59541 319 aa10.47□□□□□ -0.73
HMGN3-202ENST00000344726 DLK1P80370 383 aa10.47□□□□□ -0.73
HMGN3-202ENST00000344726 CYP2G1PQ6ZSU1 146 aa10.47□□□□□ -0.73
HMGN3-202ENST00000344726 OR8I2Q8N0Y5 310 aa10.47□□□□□ -0.73
HMGN3-202ENST00000344726 TMEM217Q8N7C4 229 aa10.47□□□□□ -0.73
HMGN3-202ENST00000344726 BPIFCQ8NFQ6 507 aa10.47□□□□□ -0.73
HMGN3-202ENST00000344726 S100ZQ8WXG8 99 aa10.47□□□□□ -0.73
HMGN3-202ENST00000344726 SLC45A2Q9UMX9 530 aa10.47□□□□□ -0.73
HMGN3-202ENST00000344726 X6R8D5 127 aa10.47□□□□□ -0.73
HMGN3-202ENST00000344726 FAM240BA0A1B0GVZ2 78 aa10.46□□□□□ -0.73
HMGN3-202ENST00000344726 ZNF705EA8MWA4 302 aaPredicted RBP10.46□□□□□ -0.73
HMGN3-202ENST00000344726 FAM25EA8MYX2 175 aa10.46□□□□□ -0.73
HMGN3-202ENST00000344726 TSC22D2O75157 780 aa10.46□□□□□ -0.73
HMGN3-202ENST00000344726 RBMY1A1P0DJD3 496 aaKnown RBP10.46□□□□□ -0.73
HMGN3-202ENST00000344726 RBMY1CP0DJD4 496 aa10.46□□□□□ -0.73
HMGN3-202ENST00000344726 HLA-DRB4P13762 266 aa10.46□□□□□ -0.73
HMGN3-202ENST00000344726 NANOS2P60321 138 aaKnown RBP10.46□□□□□ -0.73
HMGN3-202ENST00000344726 IFITM3Q01628 133 aa10.46□□□□□ -0.73
HMGN3-202ENST00000344726 ASAH1Q13510 395 aa10.46□□□□□ -0.73
HMGN3-202ENST00000344726 RBMY1FQ15415 496 aaKnown RBP10.46□□□□□ -0.73
HMGN3-202ENST00000344726 TMEM41BQ5BJD5 291 aa10.46□□□□□ -0.73
HMGN3-202ENST00000344726 C12orf45Q8N5I9 185 aaPredicted RBP10.46□□□□□ -0.73
HMGN3-202ENST00000344726 OR1B1Q8NGR6 318 aa10.46□□□□□ -0.73
HMGN3-202ENST00000344726 LINC00052Q96N35 136 aa10.46□□□□□ -0.73
HMGN3-202ENST00000344726 C11orf1Q9H5F2 150 aa10.46□□□□□ -0.73
HMGN3-202ENST00000344726 SLC25A22Q9H936 323 aa10.46□□□□□ -0.73
HMGN3-202ENST00000344726 DOK5Q9P104 306 aa10.46□□□□□ -0.73
HMGN3-202ENST00000344726 HLA-DRB4X5D2U9 266 aa10.46□□□□□ -0.73
HMGN3-202ENST00000344726 DNAH10Q8IVF4 4471 aa10.46□□□□□ -0.74
HMGN3-202ENST00000344726 K7EPK0 472 aa10.45□□□□□ -0.74
HMGN3-202ENST00000344726 PSMB3P49720 205 aa10.45□□□□□ -0.74
HMGN3-202ENST00000344726 OR10P1Q8NGE3 313 aa10.45□□□□□ -0.74
HMGN3-202ENST00000344726 PHLDA1Q8WV24 401 aaPredicted RBP10.45□□□□□ -0.74
HMGN3-202ENST00000344726 C20orf173Q96LM9 149 aa10.45□□□□□ -0.74
HMGN3-202ENST00000344726 SCRT1Q9BWW7 348 aa10.45□□□□□ -0.74
HMGN3-202ENST00000344726 SAV1Q9H4B6 383 aaPredicted RBP10.45□□□□□ -0.74
HMGN3-202ENST00000344726 IGHV4-28A0A0C4DH34 117 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 C5orf51A6NDU8 294 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 FNDC10F2Z333 226 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 F6UB75 175 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 H3BRN7 92 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 ISLRO14498 428 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 LY6G6CO95867 125 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 IL5P05113 134 aa10.44□□□□□ -0.74
HMGN3-202ENST00000344726 LINC00869P0C866 280 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms