RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 KIAA1217Q5T5P2 1943 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 NXPH3O95157 252 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 ZNF83P51522 516 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 GVQW1Q8N7I0 195 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 C5AR2Q9P296 337 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 NPIPB11E5RHQ5 1161 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 DEFB118Q96PH6 123 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 TRGV9Q99603 122 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 SMIM27A0A1W2PRY6 76 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 FXYD7P58549 80 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 C12orf74Q32Q52 190 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 ZNF488Q96MN9 340 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 CYBAP13498 195 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 IER5LQ5T953 404 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 SERP2Q8N6R1 65 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 CSDC2Q9Y534 153 aaKnown RBP3.11□□□□□ -1.91
SYNE2-202ENST00000344113 C2CD4DB7Z1M9 353 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 CRLF1O75462 422 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 MARCH3Q86UD3 253 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 TRGV11A0A075B6L2 103 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 ERCC8Q13216 396 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 SLC50A1Q9BRV3 221 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 BAZ2AQ9UIF9 1905 aaKnown RBP3.11□□□□□ -1.91
SYNE2-202ENST00000344113 RNASE1P07998 156 aaKnown RBP3.11□□□□□ -1.91
SYNE2-202ENST00000344113 SLC25A16P16260 332 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 SHISA3A0PJX4 238 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 SNRPD3P62318 126 aaKnown RBP3.11□□□□□ -1.91
SYNE2-202ENST00000344113 FAM104BQ5XKR9 115 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 VGLL4Q14135 290 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 PDCD1Q15116 288 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 FAM201AQ5SY85 155 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 UCN2Q96RP3 112 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 SOCS1O15524 211 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 DPTQ07507 201 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 PF4P02776 101 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 GATA2P23769 480 aaPredicted RBP3.11□□□□□ -1.91
SYNE2-202ENST00000344113 CRYBA2P53672 197 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 TCF15Q12870 199 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 TEX45Q8NA69 505 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 C18orf12Q96KH6 178 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 TP73-AS1Q9UF72 201 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 A0A087WX48 190 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 LY6G5BQ8NDX9 201 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 SCN7AQ01118 1682 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 A0A0A6YYD5 115 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 TMEM229AB2RXF0 380 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 RFESDQ8TAC1 157 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 NPIPB3Q92617 1050 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 IGLL1P15814 213 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 TMEM196Q5HYL7 178 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 GUSBP11Q6P575 273 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 FN1P02751 2386 aaKnown RBP3.11□□□□□ -1.91
SYNE2-202ENST00000344113 TRBV10-2A0A0K0K1G8 114 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 CCL1P22362 96 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 HERVK_113P63121 156 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 WFDC11Q8NEX6 87 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 DDB2Q92466 427 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 ZIC3O60481 467 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 ST6GALNAC6Q969X2 333 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 EML6Q6ZMW3 1958 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 GLI3P10071 1580 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 FAM19A5Q7Z5A7 132 aaPredicted RBP3.11□□□□□ -1.91
SYNE2-202ENST00000344113 FAM90A1Q86YD7 464 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 NRACQ8N912 160 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 FDCSPQ8NFU4 85 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 ORMDL1Q9P0S3 153 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 WNT6Q9Y6F9 365 aa3.11□□□□□ -1.91
SYNE2-202ENST00000344113 UBE2E1P51965 193 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 EBLN2Q6P2I7 272 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 SRXN1Q9BYN0 137 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 ACACBO00763 2458 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 MGPP08493 103 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 PFN3P60673 137 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 TMEM200BQ69YZ2 307 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 PNRC2Q9NPJ4 139 aaKnown RBP3.1□□□□□ -1.91
SYNE2-202ENST00000344113 A0A1W2PQD3 144 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 GFRA3O60609 400 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 GLI4P10075 376 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 ZNF329Q86UD4 541 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 C1orf158Q8N1D5 194 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 SELPP16109 830 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 FKBP1BP68106 108 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 DAND5Q8N907 189 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 PKIGQ9Y2B9 76 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 FOXC1Q12948 553 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 TMEM158Q8WZ71 300 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 WDR87Q6ZQQ6 2873 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 VDAC2P45880 294 aaPredicted RBP3.1□□□□□ -1.91
SYNE2-202ENST00000344113 FAM19A2Q8N3H0 131 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 PPDPFQ9H3Y8 114 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 SAP30O75446 220 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 CSRP1P21291 193 aaKnown RBP3.1□□□□□ -1.91
SYNE2-202ENST00000344113 LYZP61626 148 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 TDRG1Q3Y452 100 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 C9JQL5 133 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 PIN1P1O15428 100 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 CSRP2Q16527 193 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 K7ENP7 123 aa3.1□□□□□ -1.91
SYNE2-202ENST00000344113 TM4SF5O14894 197 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms