RNA–Protein interactions for RNA: ENST00000342905.10

NLRC4-201, Transcript of NLR family CARD domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene NLRC4, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-201ENST00000342905 PATE2Q6UY27 113 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 MIR17HGQ75NE6 70 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 COMMD7Q86VX2 200 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 COMMD1Q8N668 190 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 OR1L4Q8NGR5 311 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 MYOZ3Q8TDC0 251 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 SFT2D1Q8WV19 159 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 MBD3L1Q8WWY6 194 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 RAB24Q969Q5 203 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 ATP6V0BQ99437 205 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 CITED2Q99967 270 aaPredicted RBP6.69□□□□□ -1.34
NLRC4-201ENST00000342905 MAP1LC3BQ9GZQ8 125 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 MED9Q9NWA0 146 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 GAR1Q9NY12 217 aaKnown RBP6.69□□□□□ -1.34
NLRC4-201ENST00000342905 WI2-2373I1.2A0A1W2PRP0 233 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 ANKRD34BA5PLL1 514 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 NUPL2O15504 423 aaKnown RBP6.69□□□□□ -1.34
NLRC4-201ENST00000342905 SCGB2A1O75556 95 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 TRBV12-3P01733 135 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 HBE1P02100 147 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 RD3LP0DJH9 198 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 ORM2P19652 201 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 ARL3P36405 182 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 LYZP61626 148 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 CCL20P78556 96 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 C4orf48Q5BLP8 95 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 FAM78BQ5VT40 261 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 MORN5Q5VZ52 161 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 C10orf113Q5VZT2 155 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 ZNF343Q6P1L6 599 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 ZNF600Q6ZNG1 722 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 ZNF491Q8N8L2 437 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 RNF152Q8N8N0 203 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 OR4F17Q8NGA8 305 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 OR51G1Q8NGK1 321 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 OR1B1Q8NGR6 318 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 GATAD1Q8WUU5 269 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 RNF125Q96EQ8 232 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 UHRF2Q96PU4 802 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 OR4F4Q96R69 305 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 PFDN5Q99471 154 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 MRPL32Q9BYC8 188 aaKnown RBP6.69□□□□□ -1.34
NLRC4-201ENST00000342905 GNB4Q9HAV0 340 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 SEPSECSQ9HD40 501 aaKnown RBP6.69□□□□□ -1.34
NLRC4-201ENST00000342905 DNAJC4Q9NNZ3 241 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 FUT9Q9Y231 359 aa6.69□□□□□ -1.34
NLRC4-201ENST00000342905 TSSC4Q9Y5U2 329 aaPredicted RBP6.69□□□□□ -1.34
NLRC4-201ENST00000342905 MEGF8Q7Z7M0 2845 aa6.68□□□□□ -1.34
NLRC4-201ENST00000342905 ELOA3CA0A087WX78 387 aaPredicted RBP6.68□□□□□ -1.34
NLRC4-201ENST00000342905 TRAV1-1A0A0B4J248 108 aa6.68□□□□□ -1.34
NLRC4-201ENST00000342905 IGHV3-35A0A0C4DH35 117 aa6.68□□□□□ -1.34
NLRC4-201ENST00000342905 ADARB2-AS1A8MUL3 147 aa6.68□□□□□ -1.34
NLRC4-201ENST00000342905 HYPMO75409 117 aa6.68□□□□□ -1.34
NLRC4-201ENST00000342905 OR2C1O95371 312 aa6.68□□□□□ -1.34
NLRC4-201ENST00000342905 IL4P05112 153 aa6.68□□□□□ -1.34
NLRC4-201ENST00000342905 STAG3L2P0CL84 134 aa6.68□□□□□ -1.34
NLRC4-201ENST00000342905 STAG3L3P0CL85 134 aa6.68□□□□□ -1.34
NLRC4-201ENST00000342905 USF2Q15853 346 aaPredicted RBP6.68□□□□□ -1.34
NLRC4-201ENST00000342905 NSUN5P1Q3KNT7 163 aa6.68□□□□□ -1.34
NLRC4-201ENST00000342905 TCTEX1D4Q5JR98 221 aa6.68□□□□□ -1.34
NLRC4-201ENST00000342905 KHDC1LQ5JSQ8 128 aa6.68□□□□□ -1.34
NLRC4-201ENST00000342905 IL34Q6ZMJ4 242 aa6.68□□□□□ -1.34
NLRC4-201ENST00000342905 Q8WTZ3 238 aa6.68□□□□□ -1.34
NLRC4-201ENST00000342905 OR5B12Q96R08 314 aa6.68□□□□□ -1.34
NLRC4-201ENST00000342905 RNF2Q99496 336 aa6.68□□□□□ -1.34
NLRC4-201ENST00000342905 PBDC1Q9BVG4 233 aa6.68□□□□□ -1.34
NLRC4-201ENST00000342905 TMPRSS5Q9H3S3 457 aa6.68□□□□□ -1.34
NLRC4-201ENST00000342905 HIGD1AQ9Y241 93 aa6.68□□□□□ -1.34
NLRC4-201ENST00000342905 PUS1Q9Y606 427 aaKnown RBP eCLIP6.68□□□□□ -1.34
NLRC4-201ENST00000342905 IGHV3OR16-8A0A075B7F1 116 aa6.67□□□□□ -1.34
NLRC4-201ENST00000342905 TRAV5A0A0B4J249 113 aa6.67□□□□□ -1.34
NLRC4-201ENST00000342905 NUDT19A8MXV4 375 aa6.67□□□□□ -1.34
NLRC4-201ENST00000342905 BMPR1BO00238 502 aa6.67□□□□□ -1.34
NLRC4-201ENST00000342905 ARL14EPLP0DKL9 152 aa6.67□□□□□ -1.34
NLRC4-201ENST00000342905 TOMM20LQ6UXN7 152 aa6.67□□□□□ -1.34
NLRC4-201ENST00000342905 LINC00305Q7Z4B0 112 aa6.67□□□□□ -1.34
NLRC4-201ENST00000342905 MARC2Q969Z3 335 aa6.67□□□□□ -1.34
NLRC4-201ENST00000342905 FAM167A-AS1Q96KT0 104 aa6.67□□□□□ -1.34
NLRC4-201ENST00000342905 SCRT1Q9BWW7 348 aa6.67□□□□□ -1.34
NLRC4-201ENST00000342905 SLC25A2Q9BXI2 301 aa6.67□□□□□ -1.34
NLRC4-201ENST00000342905 TECRQ9NZ01 308 aaKnown RBP6.67□□□□□ -1.34
NLRC4-201ENST00000342905 MRPL27Q9P0M9 148 aaKnown RBP6.67□□□□□ -1.34
NLRC4-201ENST00000342905 NOTCH1P46531 2555 aa6.67□□□□□ -1.34
NLRC4-201ENST00000342905 A0A1W2PRX2 142 aa6.66□□□□□ -1.34
NLRC4-201ENST00000342905 RAB19A4D1S5 217 aa6.66□□□□□ -1.34
NLRC4-201ENST00000342905 H3BRN7 92 aa6.66□□□□□ -1.34
NLRC4-201ENST00000342905 ATP6V1G1O75348 118 aa6.66□□□□□ -1.34
NLRC4-201ENST00000342905 CXorf1O96002 111 aa6.66□□□□□ -1.34
NLRC4-201ENST00000342905 LGALS1P09382 135 aaKnown RBP6.66□□□□□ -1.34
NLRC4-201ENST00000342905 C8orf88P0DMB2 117 aa6.66□□□□□ -1.34
NLRC4-201ENST00000342905 SRSF3P84103 164 aaKnown RBP6.66□□□□□ -1.34
NLRC4-201ENST00000342905 RELQ04864 619 aaPredicted RBP6.66□□□□□ -1.34
NLRC4-201ENST00000342905 KHDC3LQ587J8 217 aa6.66□□□□□ -1.34
NLRC4-201ENST00000342905 TOR2AQ5JU69 321 aa6.66□□□□□ -1.34
NLRC4-201ENST00000342905 HIST2H2BDQ6DRA6 164 aa6.66□□□□□ -1.34
NLRC4-201ENST00000342905 C18orf65Q6ZTR6 163 aa6.66□□□□□ -1.34
NLRC4-201ENST00000342905 IQCF2Q8IXL9 164 aa6.66□□□□□ -1.34
NLRC4-201ENST00000342905 ZNF503Q96F45 646 aa6.66□□□□□ -1.34
NLRC4-201ENST00000342905 UBE2E2Q96LR5 201 aa6.66□□□□□ -1.34
NLRC4-201ENST00000342905 FAM210AQ96ND0 272 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms