RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 CCL24O00175 119 aa12.53□□□□□ -0.4
SNED1-202ENST00000342631 RAB2AP61019 212 aa12.53□□□□□ -0.4
SNED1-202ENST00000342631 C1QL4Q86Z23 238 aa12.53□□□□□ -0.4
SNED1-202ENST00000342631 TMEM37Q8WXS4 190 aa12.53□□□□□ -0.4
SNED1-202ENST00000342631 RAX2Q96IS3 184 aa12.53□□□□□ -0.4
SNED1-202ENST00000342631 ACTR3CQ9C0K3 210 aaPredicted RBP12.53□□□□□ -0.4
SNED1-202ENST00000342631 PLA2G2EQ9NZK7 142 aa12.53□□□□□ -0.4
SNED1-202ENST00000342631 RABAC1Q9UI14 185 aa12.53□□□□□ -0.4
SNED1-202ENST00000342631 UFC1Q9Y3C8 167 aa12.53□□□□□ -0.4
SNED1-202ENST00000342631 MYCNOSP40205 109 aa12.52□□□□□ -0.4
SNED1-202ENST00000342631 KLF5Q13887 457 aaPredicted RBP12.52□□□□□ -0.4
SNED1-202ENST00000342631 USF2Q15853 346 aaPredicted RBP12.52□□□□□ -0.4
SNED1-202ENST00000342631 DEFB136Q30KP8 78 aa12.52□□□□□ -0.4
SNED1-202ENST00000342631 PATE2Q6UY27 113 aa12.52□□□□□ -0.4
SNED1-202ENST00000342631 RPP25LQ8N5L8 163 aaKnown RBP12.52□□□□□ -0.4
SNED1-202ENST00000342631 SAT2Q96F10 170 aaPredicted RBP12.52□□□□□ -0.4
SNED1-202ENST00000342631 RCC1LQ96I51 464 aaKnown RBP12.52□□□□□ -0.4
SNED1-202ENST00000342631 METTL26Q96S19 204 aa12.52□□□□□ -0.4
SNED1-202ENST00000342631 VSIRQ9H7M9 311 aa12.52□□□□□ -0.4
SNED1-202ENST00000342631 DOK5Q9P104 306 aa12.52□□□□□ -0.4
SNED1-202ENST00000342631 A0A1W2PPV4 95 aa12.52□□□□□ -0.41
SNED1-202ENST00000342631 A8MWP6 167 aa12.52□□□□□ -0.41
SNED1-202ENST00000342631 NSUN5P1Q3KNT7 163 aa12.52□□□□□ -0.41
SNED1-202ENST00000342631 GCSAMLQ5JQS6 135 aa12.52□□□□□ -0.41
SNED1-202ENST00000342631 DAZ1Q9NQZ3 744 aaKnown RBP12.52□□□□□ -0.41
SNED1-202ENST00000342631 RGS13O14921 159 aa12.51□□□□□ -0.41
SNED1-202ENST00000342631 NPPCP23582 126 aa12.51□□□□□ -0.41
SNED1-202ENST00000342631 CRYBB3P26998 211 aa12.51□□□□□ -0.41
SNED1-202ENST00000342631 CDC34P49427 236 aaPredicted RBP12.51□□□□□ -0.41
SNED1-202ENST00000342631 FAM74A1Q5RGS3 127 aa12.51□□□□□ -0.41
SNED1-202ENST00000342631 FAM78BQ5VT40 261 aa12.51□□□□□ -0.41
SNED1-202ENST00000342631 UNQ9165/PRO28630Q6UXU0 137 aa12.51□□□□□ -0.41
SNED1-202ENST00000342631 C12orf54Q6X4T0 127 aa12.51□□□□□ -0.41
SNED1-202ENST00000342631 LINC00305Q7Z4B0 112 aa12.51□□□□□ -0.41
SNED1-202ENST00000342631 NARS2Q96I59 477 aaKnown RBP12.51□□□□□ -0.41
SNED1-202ENST00000342631 C20orf24Q9BUV8 137 aa12.51□□□□□ -0.41
SNED1-202ENST00000342631 FUT9Q9Y231 359 aa12.51□□□□□ -0.41
SNED1-202ENST00000342631 CTXND1A0A1B0GTU2 59 aa12.5□□□□□ -0.41
SNED1-202ENST00000342631 ZNF320A2RRD8 509 aa12.5□□□□□ -0.41
SNED1-202ENST00000342631 BLOC1S1P78537 153 aa12.5□□□□□ -0.41
SNED1-202ENST00000342631 OR4F17Q8NGA8 305 aa12.5□□□□□ -0.41
SNED1-202ENST00000342631 FAM213BQ8TBF2 198 aa12.5□□□□□ -0.41
SNED1-202ENST00000342631 OR4F4Q96R69 305 aa12.5□□□□□ -0.41
SNED1-202ENST00000342631 SLC25A39Q9BZJ4 359 aaPredicted RBP12.5□□□□□ -0.41
SNED1-202ENST00000342631 SEPSECSQ9HD40 501 aaKnown RBP12.5□□□□□ -0.41
SNED1-202ENST00000342631 ZNF705EA8MWA4 302 aaPredicted RBP12.5□□□□□ -0.41
SNED1-202ENST00000342631 TAS2R45P59539 299 aa12.5□□□□□ -0.41
SNED1-202ENST00000342631 FAM122CQ6P4D5 195 aa12.5□□□□□ -0.41
SNED1-202ENST00000342631 SLC7A5P1Q8MH63 180 aa12.5□□□□□ -0.41
SNED1-202ENST00000342631 C3orf56Q8N813 242 aa12.5□□□□□ -0.41
SNED1-202ENST00000342631 SHANK2-AS3Q9BTD1 123 aa12.5□□□□□ -0.41
SNED1-202ENST00000342631 A0A1W2PS18 150 aa12.49□□□□□ -0.41
SNED1-202ENST00000342631 H3BRN7 92 aa12.49□□□□□ -0.41
SNED1-202ENST00000342631 BMI1P35226 326 aa12.49□□□□□ -0.41
SNED1-202ENST00000342631 SLURP1P55000 103 aa12.49□□□□□ -0.41
SNED1-202ENST00000342631 SYNJ2BPP57105 145 aa12.49□□□□□ -0.41
SNED1-202ENST00000342631 HIST2H2BDQ6DRA6 164 aa12.49□□□□□ -0.41
SNED1-202ENST00000342631 SHISA2Q6UWI4 295 aa12.49□□□□□ -0.41
SNED1-202ENST00000342631 STXBP6Q8NFX7 210 aa12.49□□□□□ -0.41
SNED1-202ENST00000342631 RAB24Q969Q5 203 aa12.49□□□□□ -0.41
SNED1-202ENST00000342631 TECRQ9NZ01 308 aaKnown RBP12.49□□□□□ -0.41
SNED1-202ENST00000342631 PEMTQ9UBM1 199 aa12.49□□□□□ -0.41
SNED1-202ENST00000342631 U3KQE9 123 aa12.49□□□□□ -0.41
SNED1-202ENST00000342631 TEX46H3BTG2 121 aa12.49□□□□□ -0.41
SNED1-202ENST00000342631 C8orf88P0DMB2 117 aa12.49□□□□□ -0.41
SNED1-202ENST00000342631 RAB14P61106 215 aa12.49□□□□□ -0.41
SNED1-202ENST00000342631 C1orf194Q5T5A4 169 aa12.49□□□□□ -0.41
SNED1-202ENST00000342631 MBD3L1Q8WWY6 194 aa12.49□□□□□ -0.41
SNED1-202ENST00000342631 MARC2Q969Z3 335 aa12.49□□□□□ -0.41
SNED1-202ENST00000342631 UHRF2Q96PU4 802 aa12.49□□□□□ -0.41
SNED1-202ENST00000342631 ZNF98A6NK75 572 aa12.48□□□□□ -0.41
SNED1-202ENST00000342631 H2AFB1P0C5Y9 115 aa12.48□□□□□ -0.41
SNED1-202ENST00000342631 FHITP49789 147 aa12.48□□□□□ -0.41
SNED1-202ENST00000342631 RIPPLY3P57055 190 aa12.48□□□□□ -0.41
SNED1-202ENST00000342631 KHDC3LQ587J8 217 aa12.48□□□□□ -0.41
SNED1-202ENST00000342631 TMEM231Q9H6L2 316 aa12.48□□□□□ -0.41
SNED1-202ENST00000342631 SLC25A22Q9H936 323 aa12.48□□□□□ -0.41
SNED1-202ENST00000342631 IGHV3OR16-8A0A075B7F1 116 aa12.47□□□□□ -0.41
SNED1-202ENST00000342631 TRAV1-1A0A0B4J248 108 aa12.47□□□□□ -0.41
SNED1-202ENST00000342631 STAG3L2P0CL84 134 aa12.47□□□□□ -0.41
SNED1-202ENST00000342631 STAG3L3P0CL85 134 aa12.47□□□□□ -0.41
SNED1-202ENST00000342631 ZNF726P1Q15940 193 aa12.47□□□□□ -0.41
SNED1-202ENST00000342631 PQLC2Q6ZP29 291 aa12.47□□□□□ -0.41
SNED1-202ENST00000342631 OR9G4Q8NGQ1 327 aa12.47□□□□□ -0.41
SNED1-202ENST00000342631 DLX4Q92988 240 aaPredicted RBP12.47□□□□□ -0.41
SNED1-202ENST00000342631 GRAMD2BQ96HH9 432 aa12.47□□□□□ -0.41
SNED1-202ENST00000342631 GPR82Q96P67 336 aa12.47□□□□□ -0.41
SNED1-202ENST00000342631 DUX3Q96PT4 197 aa12.47□□□□□ -0.41
SNED1-202ENST00000342631 FBN1P35555 2871 aaKnown RBP12.47□□□□□ -0.41
SNED1-202ENST00000342631 IGHV7-4-1A0A0J9YVY3 117 aa12.47□□□□□ -0.41
SNED1-202ENST00000342631 BUB3O43684 328 aa12.47□□□□□ -0.41
SNED1-202ENST00000342631 HBE1P02100 147 aa12.47□□□□□ -0.41
SNED1-202ENST00000342631 TM4SF20Q53R12 229 aa12.47□□□□□ -0.41
SNED1-202ENST00000342631 MIR17HGQ75NE6 70 aa12.47□□□□□ -0.41
SNED1-202ENST00000342631 TMEM213A2RRL7 107 aa12.46□□□□□ -0.42
SNED1-202ENST00000342631 MAP1LC3B2A6NCE7 125 aa12.46□□□□□ -0.42
SNED1-202ENST00000342631 PF4P02776 101 aa12.46□□□□□ -0.42
SNED1-202ENST00000342631 SFT2D1Q8WV19 159 aa12.46□□□□□ -0.42
SNED1-202ENST00000342631 MAP1LC3BQ9GZQ8 125 aa12.46□□□□□ -0.42
SNED1-202ENST00000342631 SMPXQ9UHP9 88 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms