RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 SCN8AQ9UQD0 1980 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 ZNF138P52744 262 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 C10orf126Q8N4M7 172 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 TRGV9Q99603 122 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 RHPN1-AS1Q9BWJ2 59 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 IGKV1D-17A0A075B6S4 117 aa12.27□□□□□ -0.44
UBE3B-202ENST00000342494 ZNF876PQ49A33 203 aa12.27□□□□□ -0.44
UBE3B-202ENST00000342494 GGTLC1Q9BX51 225 aa12.27□□□□□ -0.44
UBE3B-202ENST00000342494 ROS1P08922 2347 aa12.27□□□□□ -0.45
UBE3B-202ENST00000342494 SYNJ2BPP57105 145 aa12.27□□□□□ -0.45
UBE3B-202ENST00000342494 RUSC1-AS1Q66K80 236 aa12.27□□□□□ -0.45
UBE3B-202ENST00000342494 KLHDC3Q9BQ90 382 aa12.27□□□□□ -0.45
UBE3B-202ENST00000342494 SPTAN1Q13813 2472 aaKnown RBP12.27□□□□□ -0.45
UBE3B-202ENST00000342494 DPM2O94777 84 aa12.27□□□□□ -0.45
UBE3B-202ENST00000342494 OCC1Q8TAD7 63 aa12.27□□□□□ -0.45
UBE3B-202ENST00000342494 PRDM13Q9H4Q3 707 aa12.27□□□□□ -0.45
UBE3B-202ENST00000342494 CHTOPQ9Y3Y2 248 aaKnown RBP12.27□□□□□ -0.45
UBE3B-202ENST00000342494 LINC00614P0C842 121 aa12.26□□□□□ -0.45
UBE3B-202ENST00000342494 PLNP26678 52 aa12.26□□□□□ -0.45
UBE3B-202ENST00000342494 IFITM2Q01629 132 aa12.26□□□□□ -0.45
UBE3B-202ENST00000342494 TRAV3A0A0B4J244 114 aa12.26□□□□□ -0.45
UBE3B-202ENST00000342494 NBASA2RRP1 2371 aa12.26□□□□□ -0.45
UBE3B-202ENST00000342494 A0A1B0GWB2 263 aa12.26□□□□□ -0.45
UBE3B-202ENST00000342494 PGPEP1LA6NFU8 196 aa12.26□□□□□ -0.45
UBE3B-202ENST00000342494 OVOL3O00110 214 aa12.26□□□□□ -0.45
UBE3B-202ENST00000342494 MPZP25189 248 aa12.26□□□□□ -0.45
UBE3B-202ENST00000342494 TSKUQ8WUA8 353 aa12.26□□□□□ -0.45
UBE3B-202ENST00000342494 LINC00477Q96M19 166 aa12.26□□□□□ -0.45
UBE3B-202ENST00000342494 PNRC2Q9NPJ4 139 aaKnown RBP12.26□□□□□ -0.45
UBE3B-202ENST00000342494 SIPA1L1O43166 1804 aa12.26□□□□□ -0.45
UBE3B-202ENST00000342494 CST9LQ9H4G1 147 aa12.26□□□□□ -0.45
UBE3B-202ENST00000342494 TRAV2A0A0B4J234 112 aa12.25□□□□□ -0.45
UBE3B-202ENST00000342494 PHLDA1Q8WV24 401 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-202ENST00000342494 DAZ1Q9NQZ3 744 aaKnown RBP12.25□□□□□ -0.45
UBE3B-202ENST00000342494 DEFB130BP0DP73 79 aa12.25□□□□□ -0.45
UBE3B-202ENST00000342494 DEFB130AP0DP74 79 aa12.25□□□□□ -0.45
UBE3B-202ENST00000342494 TMEM190Q8WZ59 177 aa12.25□□□□□ -0.45
UBE3B-202ENST00000342494 IGHV3-64A0A075B6Q5 118 aa12.25□□□□□ -0.45
UBE3B-202ENST00000342494 SERF1AO75920 110 aa12.25□□□□□ -0.45
UBE3B-202ENST00000342494 MORN3Q6PF18 240 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-202ENST00000342494 Q71RC1 249 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-202ENST00000342494 OR5A1Q8NGJ0 315 aa12.25□□□□□ -0.45
UBE3B-202ENST00000342494 GFI1Q99684 422 aa12.25□□□□□ -0.45
UBE3B-202ENST00000342494 JPT2Q9H910 190 aa12.25□□□□□ -0.45
UBE3B-202ENST00000342494 PAX2Q02962 417 aa12.25□□□□□ -0.45
UBE3B-202ENST00000342494 CADP27708 2225 aa12.25□□□□□ -0.45
UBE3B-202ENST00000342494 H0YIZ8 118 aa12.24□□□□□ -0.45
UBE3B-202ENST00000342494 TYMSP04818 313 aa12.24□□□□□ -0.45
UBE3B-202ENST00000342494 LINC01549A6NIU2 74 aa12.24□□□□□ -0.45
UBE3B-202ENST00000342494 CA1P00915 261 aaPredicted RBP12.24□□□□□ -0.45
UBE3B-202ENST00000342494 LY6G6FQ5SQ64 297 aa12.24□□□□□ -0.45
UBE3B-202ENST00000342494 VSIRQ9H7M9 311 aa12.24□□□□□ -0.45
UBE3B-202ENST00000342494 LTBP1Q14766 1721 aa12.24□□□□□ -0.45
UBE3B-202ENST00000342494 C5orf63A6NC05 138 aa12.24□□□□□ -0.45
UBE3B-202ENST00000342494 NRN1Q9NPD7 142 aa12.24□□□□□ -0.45
UBE3B-202ENST00000342494 TNFSF13O75888 250 aa12.24□□□□□ -0.45
UBE3B-202ENST00000342494 GZMBP10144 247 aa12.24□□□□□ -0.45
UBE3B-202ENST00000342494 HGFACQ04756 655 aa12.24□□□□□ -0.45
UBE3B-202ENST00000342494 CR1LQ2VPA4 569 aa12.24□□□□□ -0.45
UBE3B-202ENST00000342494 SPATA31B1PQ5VZV4 182 aa12.24□□□□□ -0.45
UBE3B-202ENST00000342494 KIF26BQ2KJY2 2108 aa12.23□□□□□ -0.45
UBE3B-202ENST00000342494 ADMP35318 185 aa12.23□□□□□ -0.45
UBE3B-202ENST00000342494 UBE2E1P51965 193 aa12.23□□□□□ -0.45
UBE3B-202ENST00000342494 Q6P435 159 aa12.23□□□□□ -0.45
UBE3B-202ENST00000342494 STAG3L3P0CL85 134 aa12.23□□□□□ -0.45
UBE3B-202ENST00000342494 BTCP35070 178 aa12.23□□□□□ -0.45
UBE3B-202ENST00000342494 TMEM249Q2WGJ8 235 aa12.23□□□□□ -0.45
UBE3B-202ENST00000342494 GREB1Q4ZG55 1949 aa12.23□□□□□ -0.45
UBE3B-202ENST00000342494 WFDC1Q9HC57 220 aa12.23□□□□□ -0.45
UBE3B-202ENST00000342494 MED12Q93074 2177 aa12.23□□□□□ -0.45
UBE3B-202ENST00000342494 LCTP09848 1927 aa12.23□□□□□ -0.45
UBE3B-202ENST00000342494 DEFB131AP59861 70 aa12.22□□□□□ -0.45
UBE3B-202ENST00000342494 CD300EQ496F6 205 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-202ENST00000342494 LCN12Q6JVE5 192 aa12.22□□□□□ -0.45
UBE3B-202ENST00000342494 LINC00473A8K010 186 aa12.22□□□□□ -0.45
UBE3B-202ENST00000342494 RPRMLQ8N4K4 120 aa12.22□□□□□ -0.45
UBE3B-202ENST00000342494 TCRAP04437 139 aa12.22□□□□□ -0.45
UBE3B-202ENST00000342494 TMEM95Q3KNT9 176 aa12.22□□□□□ -0.45
UBE3B-202ENST00000342494 Q8TAT8 98 aa12.22□□□□□ -0.45
UBE3B-202ENST00000342494 DMRT1Q9Y5R6 373 aa12.22□□□□□ -0.45
UBE3B-202ENST00000342494 IGFL3Q6UXB1 125 aa12.22□□□□□ -0.45
UBE3B-202ENST00000342494 IGHV1-69DA0A0B4J2H0 117 aa12.22□□□□□ -0.45
UBE3B-202ENST00000342494 IGKV1-5P01602 117 aa12.22□□□□□ -0.45
UBE3B-202ENST00000342494 IGHV1-69P01742 117 aa12.22□□□□□ -0.45
UBE3B-202ENST00000342494 LAGE3Q14657 143 aa12.22□□□□□ -0.45
UBE3B-202ENST00000342494 PDCD11Q14690 1871 aaKnown RBP12.22□□□□□ -0.45
UBE3B-202ENST00000342494 IGHV4-39P01824 125 aa12.21□□□□□ -0.45
UBE3B-202ENST00000342494 MBD3L1Q8WWY6 194 aa12.21□□□□□ -0.45
UBE3B-202ENST00000342494 MGST2Q99735 147 aa12.21□□□□□ -0.45
UBE3B-202ENST00000342494 IGFL4Q6B9Z1 124 aa12.21□□□□□ -0.45
UBE3B-202ENST00000342494 SFTA2Q6UW10 78 aa12.21□□□□□ -0.45
UBE3B-202ENST00000342494 DEFB104AQ8WTQ1 72 aa12.21□□□□□ -0.45
UBE3B-202ENST00000342494 IGKCP01834 107 aa12.21□□□□□ -0.46
UBE3B-202ENST00000342494 LHFPL1Q86WI0 220 aa12.21□□□□□ -0.46
UBE3B-202ENST00000342494 C1QL4Q86Z23 238 aa12.21□□□□□ -0.46
UBE3B-202ENST00000342494 TOMM40O96008 361 aa12.21□□□□□ -0.46
UBE3B-202ENST00000342494 ATP5L2Q7Z4Y8 100 aa12.21□□□□□ -0.46
UBE3B-202ENST00000342494 RFNGQ9Y644 331 aa12.21□□□□□ -0.46
UBE3B-202ENST00000342494 NCR2O95944 276 aa12.2□□□□□ -0.46
UBE3B-202ENST00000342494 GLRX5Q86SX6 157 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms