RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 IGHV2-5P01817 119 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 LMO1P25800 156 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 GNB1LQ9BYB4 327 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 PRDM13Q9H4Q3 707 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 BEX4Q9NWD9 120 aaPredicted RBP6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 LAMTOR2Q9Y2Q5 125 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 SIGLEC9Q9Y336 463 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 KIF26AQ9ULI4 1882 aaPredicted RBP6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 TP53BP1Q12888 1972 aaPredicted RBP6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 SCN5AQ14524 2016 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 IGHV3-49A0A0A0MS15 119 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 HIGD1CA8MV81 97 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 TOMM40O96008 361 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 INSP01308 110 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 IGHV2-70P01814 119 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 PLNP26678 52 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 ZNF474Q6S9Z5 364 aaPredicted RBP6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 ZNF562Q6V9R5 426 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 FGFBP3Q8TAT2 258 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 TRBV24-1A0A075B6N3 115 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 SAP30O75446 220 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 ZNF585BQ52M93 769 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 LYPD6BQ8NI32 183 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 GGTLC1Q9BX51 225 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 KLK15Q9H2R5 256 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 IGHV3-23P01764 117 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 ZNF688P0C7X2 276 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 CBLN1P23435 193 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 RPL23P62829 140 aaKnown RBP6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 SPATA31B1PQ5VZV4 182 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 SP5Q6BEB4 398 aaPredicted RBP6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 Q6P435 159 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 TREML4Q6UXN2 200 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 DAZ1Q9NQZ3 744 aaKnown RBP6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 A0A0A6YYD4 124 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 HIST1H2BKO60814 126 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 HIST1H2BJP06899 126 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 HIST1H2BOP23527 126 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 HIST1H2BBP33778 126 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 ATP5G3P48201 142 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 HIST1H2BDP58876 126 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 HIST1H2BCP62807 126 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 HIST2H2BEQ16778 126 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 C1orf194Q5T5A4 169 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 C1orf122Q6ZSJ8 110 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 RNF182Q8N6D2 247 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 CD177Q8N6Q3 437 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 FAM110DQ8TAY7 271 aaPredicted RBP6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 HIST1H2BHQ93079 126 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 HIST1H2BNQ99877 126 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 HIST1H2BMQ99879 126 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 NDUFAF3Q9BU61 184 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 A0A087WX48 190 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 A0A1B0GV90 55 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 A0A1W2PRX2 142 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 SCN2AQ99250 2005 aa6.32□□□□□ -1.4
ATP2B4-201ENST00000341360 PSPNO60542 156 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 LCN12Q6JVE5 192 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 C3orf56Q8N813 242 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 SLC25A39Q9BZJ4 359 aaPredicted RBP6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 TMEM160Q9NX00 188 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.31□□□□□ -1.41e-5■■■■□ 21.5
ATP2B4-201ENST00000341360 LYNX1G3V0Z9 82 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 H3BUA1 57 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 LYNX1P0DP58 116 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 CD33P20138 364 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 PLP1P60201 277 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 YPEL3P61236 119 aaPredicted RBP6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 HAPLN4Q86UW8 402 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 HIST3H2BBQ8N257 126 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 PIP4P2Q8N4L2 257 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 TMEM170AQ8WVE7 144 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 FAM90A2PQ658T7 463 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 FOXC2Q99958 501 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 CRIM1Q9NZV1 1036 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 MYO18BQ8IUG5 2567 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 IGHV3-66A0A0C4DH42 116 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 E7EQL1 145 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 RAMP3O60896 148 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 DPM2O94777 84 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 PSG1P11464 419 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 PTPN13Q12923 2485 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 KIAA1644Q3SXP7 199 aa6.31□□□□□ -1.4
ATP2B4-201ENST00000341360 MYO7BQ6PIF6 2116 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 IGHV1-69DA0A0B4J2H0 117 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 IGKV3OR2-268A0A0C4DH90 116 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 IGHV1-69P01742 117 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 HTN3P15516 51 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 MRPL52Q86TS9 123 aaKnown RBP6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 PLEKHB2Q96CS7 222 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 ADARB2-AS1A8MUL3 147 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 PI4KAP42356 2102 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 FOXG1P55316 489 aaPredicted RBP6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 FOXA3P55318 350 aaPredicted RBP6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 IL15RAQ13261 267 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 PRSS33Q8NF86 280 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 OR9G4Q8NGQ1 327 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 BPESC1Q9GZL8 116 aa6.3□□□□□ -1.4
ATP2B4-201ENST00000341360 TCF20Q9UGU0 1960 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms