RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ATRQ13535 2644 aa13.48□□□□□ -0.25
CLDN4-201ENST00000340958 BRI3O95415 125 aa13.48□□□□□ -0.25
CLDN4-201ENST00000340958 IGLV1-40P01703 118 aa13.48□□□□□ -0.25
CLDN4-201ENST00000340958 IGHV3-11P01762 117 aa13.48□□□□□ -0.25
CLDN4-201ENST00000340958 BCL2P10415 239 aa13.48□□□□□ -0.25
CLDN4-201ENST00000340958 CFHR3Q02985 330 aa13.48□□□□□ -0.25
CLDN4-201ENST00000340958 PATE2Q6UY27 113 aa13.48□□□□□ -0.25
CLDN4-201ENST00000340958 S100A7AQ86SG5 101 aa13.48□□□□□ -0.25
CLDN4-201ENST00000340958 CCDC140Q96MF4 163 aa13.48□□□□□ -0.25
CLDN4-201ENST00000340958 CHRDL1Q9BU40 450 aa13.48□□□□□ -0.25
CLDN4-201ENST00000340958 MANBALQ9NQG1 85 aa13.48□□□□□ -0.25
CLDN4-201ENST00000340958 IGHV3-35A0A0C4DH35 117 aa13.47□□□□□ -0.25
CLDN4-201ENST00000340958 CEBPGP53567 150 aa13.47□□□□□ -0.25
CLDN4-201ENST00000340958 PLP1P60201 277 aa13.47□□□□□ -0.25
CLDN4-201ENST00000340958 TEX38Q6PEX7 206 aa13.47□□□□□ -0.25
CLDN4-201ENST00000340958 PQLC2Q6ZP29 291 aa13.47□□□□□ -0.25
CLDN4-201ENST00000340958 LCNL1Q6ZST4 164 aa13.47□□□□□ -0.25
CLDN4-201ENST00000340958 OR5AU1Q8NGC0 362 aa13.47□□□□□ -0.25
CLDN4-201ENST00000340958 SEC11CQ9BY50 192 aa13.47□□□□□ -0.25
CLDN4-201ENST00000340958 ESM1Q9NQ30 184 aa13.47□□□□□ -0.25
CLDN4-201ENST00000340958 PUS1Q9Y606 427 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLDN4-201ENST00000340958 TRAV5A0A0B4J249 113 aa13.46□□□□□ -0.25
CLDN4-201ENST00000340958 F8W036 122 aa13.46□□□□□ -0.25
CLDN4-201ENST00000340958 TGOLN2O43493 480 aa13.46□□□□□ -0.25
CLDN4-201ENST00000340958 IGHG4P01861 327 aa13.46□□□□□ -0.25
CLDN4-201ENST00000340958 CD5P06127 495 aa13.46□□□□□ -0.25
CLDN4-201ENST00000340958 GCHFRP30047 84 aa13.46□□□□□ -0.25
CLDN4-201ENST00000340958 UBE2G2P60604 165 aa13.46□□□□□ -0.25
CLDN4-201ENST00000340958 RELQ04864 619 aaPredicted RBP13.46□□□□□ -0.25
CLDN4-201ENST00000340958 VAX2Q9UIW0 290 aa13.46□□□□□ -0.25
CLDN4-201ENST00000340958 LOC102723971A0A1B0GUV8 181 aa13.46□□□□□ -0.26
CLDN4-201ENST00000340958 CLDN34H7C241 214 aa13.46□□□□□ -0.26
CLDN4-201ENST00000340958 SFTA3P0C7M3 94 aa13.46□□□□□ -0.26
CLDN4-201ENST00000340958 ARL3P36405 182 aa13.46□□□□□ -0.26
CLDN4-201ENST00000340958 TAGLN2P37802 199 aaKnown RBP13.46□□□□□ -0.26
CLDN4-201ENST00000340958 ZNF506Q5JVG8 444 aa13.46□□□□□ -0.26
CLDN4-201ENST00000340958 CST9LP1Q5W188 147 aa13.46□□□□□ -0.26
CLDN4-201ENST00000340958 ZNF600Q6ZNG1 722 aa13.46□□□□□ -0.26
CLDN4-201ENST00000340958 ZNF491Q8N8L2 437 aa13.46□□□□□ -0.26
CLDN4-201ENST00000340958 JMJD8Q96S16 334 aa13.46□□□□□ -0.26
CLDN4-201ENST00000340958 SMDT1Q9H4I9 107 aa13.46□□□□□ -0.26
CLDN4-201ENST00000340958 TMEM89A2RUT3 159 aa13.45□□□□□ -0.26
CLDN4-201ENST00000340958 PPP5D1E7EU14 171 aa13.45□□□□□ -0.26
CLDN4-201ENST00000340958 PAGE4O60829 102 aa13.45□□□□□ -0.26
CLDN4-201ENST00000340958 OR10J4P0C629 311 aa13.45□□□□□ -0.26
CLDN4-201ENST00000340958 ADMP35318 185 aa13.45□□□□□ -0.26
CLDN4-201ENST00000340958 MORN5Q5VZ52 161 aa13.45□□□□□ -0.26
CLDN4-201ENST00000340958 Q8N2B8 174 aa13.45□□□□□ -0.26
CLDN4-201ENST00000340958 OR4X2Q8NGF9 303 aa13.45□□□□□ -0.26
CLDN4-201ENST00000340958 ATP6V0BQ99437 205 aa13.45□□□□□ -0.26
CLDN4-201ENST00000340958 SLC25A2Q9BXI2 301 aa13.45□□□□□ -0.26
CLDN4-201ENST00000340958 TMEM167BQ9NRX6 74 aa13.45□□□□□ -0.26
CLDN4-201ENST00000340958 FBN1P35555 2871 aaKnown RBP13.44□□□□□ -0.26
CLDN4-201ENST00000340958 WI2-2373I1.2A0A1W2PRP0 233 aa13.44□□□□□ -0.26
CLDN4-201ENST00000340958 SNAPINO95295 136 aa13.44□□□□□ -0.26
CLDN4-201ENST00000340958 OR2C1O95371 312 aa13.44□□□□□ -0.26
CLDN4-201ENST00000340958 PSMB8P28062 276 aa13.44□□□□□ -0.26
CLDN4-201ENST00000340958 ICAM4Q14773 271 aa13.44□□□□□ -0.26
CLDN4-201ENST00000340958 C10orf99Q6UWK7 81 aa13.44□□□□□ -0.26
CLDN4-201ENST00000340958 STXBP6Q8NFX7 210 aa13.44□□□□□ -0.26
CLDN4-201ENST00000340958 PAXXQ9BUH6 204 aa13.44□□□□□ -0.26
CLDN4-201ENST00000340958 SLC25A39Q9BZJ4 359 aaPredicted RBP13.44□□□□□ -0.26
CLDN4-201ENST00000340958 SLC35B3Q9H1N7 401 aa13.44□□□□□ -0.26
CLDN4-201ENST00000340958 BMPR1BO00238 502 aa13.43□□□□□ -0.26
CLDN4-201ENST00000340958 RNASE1P07998 156 aaKnown RBP13.43□□□□□ -0.26
CLDN4-201ENST00000340958 S100A7P31151 101 aa13.43□□□□□ -0.26
CLDN4-201ENST00000340958 UBE2L3P68036 154 aaKnown RBP13.43□□□□□ -0.26
CLDN4-201ENST00000340958 TMEM88Q6PEY1 159 aa13.43□□□□□ -0.26
CLDN4-201ENST00000340958 LINC00518Q8N0U6 118 aa13.43□□□□□ -0.26
CLDN4-201ENST00000340958 OR5B12Q96R08 314 aa13.43□□□□□ -0.26
CLDN4-201ENST00000340958 OR51M1Q9H341 326 aa13.43□□□□□ -0.26
CLDN4-201ENST00000340958 C9JQL5 133 aa13.43□□□□□ -0.26
CLDN4-201ENST00000340958 HSPB1P04792 205 aaKnown RBP13.43□□□□□ -0.26
CLDN4-201ENST00000340958 ELANEP08246 267 aa13.43□□□□□ -0.26
CLDN4-201ENST00000340958 HILS1P60008 231 aa13.43□□□□□ -0.26
CLDN4-201ENST00000340958 FOXE3Q13461 319 aa13.43□□□□□ -0.26
CLDN4-201ENST00000340958 PMS2P11Q13670 270 aa13.43□□□□□ -0.26
CLDN4-201ENST00000340958 KRTAP21-3Q3LHN1 58 aa13.43□□□□□ -0.26
CLDN4-201ENST00000340958 LEMD1Q68G75 181 aa13.43□□□□□ -0.26
CLDN4-201ENST00000340958 Q6ZSV7 163 aa13.43□□□□□ -0.26
CLDN4-201ENST00000340958 CBLN2Q8IUK8 224 aa13.43□□□□□ -0.26
CLDN4-201ENST00000340958 OR4F5Q8NH21 305 aa13.43□□□□□ -0.26
CLDN4-201ENST00000340958 OR4F4Q96R69 305 aa13.43□□□□□ -0.26
CLDN4-201ENST00000340958 SCRT1Q9BWW7 348 aa13.43□□□□□ -0.26
CLDN4-201ENST00000340958 MRPL27Q9P0M9 148 aaKnown RBP13.43□□□□□ -0.26
CLDN4-201ENST00000340958 RABAC1Q9UI14 185 aa13.43□□□□□ -0.26
CLDN4-201ENST00000340958 IGHV3OR16-8A0A075B7F1 116 aa13.42□□□□□ -0.26
CLDN4-201ENST00000340958 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.42□□□□□ -0.26
CLDN4-201ENST00000340958 MEF2BQ02080 365 aaPredicted RBP13.42□□□□□ -0.26
CLDN4-201ENST00000340958 KIAA0141Q14154 515 aaPredicted RBP13.42□□□□□ -0.26
CLDN4-201ENST00000340958 USF2Q15853 346 aaPredicted RBP13.42□□□□□ -0.26
CLDN4-201ENST00000340958 TOMM20LQ6UXN7 152 aa13.42□□□□□ -0.26
CLDN4-201ENST00000340958 C11orf94C9JXX5 98 aa13.41□□□□□ -0.26
CLDN4-201ENST00000340958 RPLP1P05386 114 aaKnown RBP13.41□□□□□ -0.26
CLDN4-201ENST00000340958 PYYP10082 97 aa13.41□□□□□ -0.26
CLDN4-201ENST00000340958 FAM167A-AS1Q96KT0 104 aa13.41□□□□□ -0.26
CLDN4-201ENST00000340958 C20orf24Q9BUV8 137 aa13.41□□□□□ -0.26
CLDN4-201ENST00000340958 SERTAD4Q9NUC0 356 aa13.41□□□□□ -0.26
CLDN4-201ENST00000340958 RPL15P61313 204 aaKnown RBP13.41□□□□□ -0.26
CLDN4-201ENST00000340958 SRSF2Q01130 221 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms