RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 SNAI2O43623 268 aa11.58□□□□□ -0.55
CPSF7-201ENST00000340437 FAM222BQ8WU58 562 aa11.58□□□□□ -0.55
CPSF7-201ENST00000340437 CACNG8Q8WXS5 425 aa11.58□□□□□ -0.55
CPSF7-201ENST00000340437 C22orf15Q8WYQ4 148 aa11.58□□□□□ -0.55
CPSF7-201ENST00000340437 C19orf24Q9BVV8 132 aa11.58□□□□□ -0.55
CPSF7-201ENST00000340437 WASHC3Q9Y3C0 194 aa11.58□□□□□ -0.55
CPSF7-201ENST00000340437 CSMD1Q96PZ7 3565 aa11.58□□□□□ -0.56
CPSF7-201ENST00000340437 hDV102S1A0JD36 115 aa11.58□□□□□ -0.56
CPSF7-201ENST00000340437 C17orf100A8MU93 164 aa11.58□□□□□ -0.56
CPSF7-201ENST00000340437 C22orf46C9J442 243 aa11.58□□□□□ -0.56
CPSF7-201ENST00000340437 SSX8Q7RTT4 187 aa11.58□□□□□ -0.56
CPSF7-201ENST00000340437 TMSB15BA0A087X1C1 80 aa11.58□□□□□ -0.56
CPSF7-201ENST00000340437 C20orf202A1L168 122 aa11.58□□□□□ -0.56
CPSF7-201ENST00000340437 CGB1A6NKQ9 187 aa11.58□□□□□ -0.56
CPSF7-201ENST00000340437 ITGB1BP1O14713 200 aa11.58□□□□□ -0.56
CPSF7-201ENST00000340437 TM4SF5O14894 197 aa11.58□□□□□ -0.56
CPSF7-201ENST00000340437 LY6HO94772 140 aa11.58□□□□□ -0.56
CPSF7-201ENST00000340437 GOLT1AQ6ZVE7 132 aa11.58□□□□□ -0.56
CPSF7-201ENST00000340437 PERPQ96FX8 193 aa11.58□□□□□ -0.56
CPSF7-201ENST00000340437 COL8A1P27658 744 aa11.57□□□□□ -0.56
CPSF7-201ENST00000340437 ADIPOQQ15848 244 aa11.57□□□□□ -0.56
CPSF7-201ENST00000340437 ZNF833PQ6ZTB9 187 aa11.57□□□□□ -0.56
CPSF7-201ENST00000340437 SONP18583 2426 aaKnown RBP11.57□□□□□ -0.56
CPSF7-201ENST00000340437 IGKV1D-37A0A075B6S9 117 aa11.57□□□□□ -0.56
CPSF7-201ENST00000340437 FCN3O75636 299 aa11.57□□□□□ -0.56
CPSF7-201ENST00000340437 IGLL1P15814 213 aa11.57□□□□□ -0.56
CPSF7-201ENST00000340437 BTF3P20290 206 aaKnown RBP11.57□□□□□ -0.56
CPSF7-201ENST00000340437 COX19Q49B96 90 aa11.57□□□□□ -0.56
CPSF7-201ENST00000340437 PRR30Q53SZ7 412 aaPredicted RBP11.57□□□□□ -0.56
CPSF7-201ENST00000340437 VSTM2AQ8TAG5 236 aa11.57□□□□□ -0.56
CPSF7-201ENST00000340437 CNIH1O95406 144 aa11.57□□□□□ -0.56
CPSF7-201ENST00000340437 GATA4P43694 442 aa11.57□□□□□ -0.56
CPSF7-201ENST00000340437 OR5AN1Q8NGI8 311 aa11.57□□□□□ -0.56
CPSF7-201ENST00000340437 ABHD17AQ96GS6 310 aa11.57□□□□□ -0.56
CPSF7-201ENST00000340437 ALKBH7Q9BT30 221 aaPredicted RBP11.57□□□□□ -0.56
CPSF7-201ENST00000340437 FBXL15Q9H469 300 aa11.57□□□□□ -0.56
CPSF7-201ENST00000340437 C16orf97H3BN30 126 aa11.56□□□□□ -0.56
CPSF7-201ENST00000340437 TSPOP30536 169 aa11.56□□□□□ -0.56
CPSF7-201ENST00000340437 RPL27AP46776 148 aaKnown RBP11.56□□□□□ -0.56
CPSF7-201ENST00000340437 Q9H3A6 140 aa11.56□□□□□ -0.56
CPSF7-201ENST00000340437 SPATA12Q7Z6I5 190 aa11.56□□□□□ -0.56
CPSF7-201ENST00000340437 CTRLP40313 264 aa11.56□□□□□ -0.56
CPSF7-201ENST00000340437 HES1Q14469 280 aa11.56□□□□□ -0.56
CPSF7-201ENST00000340437 TMEM167AQ8TBQ9 72 aa11.56□□□□□ -0.56
CPSF7-201ENST00000340437 FNDC10F2Z333 226 aa11.55□□□□□ -0.56
CPSF7-201ENST00000340437 TMEM11P17152 192 aa11.55□□□□□ -0.56
CPSF7-201ENST00000340437 CA7P43166 264 aa11.55□□□□□ -0.56
CPSF7-201ENST00000340437 GPR82Q96P67 336 aa11.55□□□□□ -0.56
CPSF7-201ENST00000340437 CTSZQ9UBR2 303 aa11.55□□□□□ -0.56
CPSF7-201ENST00000340437 PSMB11A5LHX3 300 aa11.55□□□□□ -0.56
CPSF7-201ENST00000340437 OR4C46A6NHA9 309 aa11.55□□□□□ -0.56
CPSF7-201ENST00000340437 HBBP68871 147 aa11.55□□□□□ -0.56
CPSF7-201ENST00000340437 RNF151Q2KHN1 245 aa11.55□□□□□ -0.56
CPSF7-201ENST00000340437 IGFL2Q6UWQ7 119 aa11.55□□□□□ -0.56
CPSF7-201ENST00000340437 INSIG2Q9Y5U4 225 aa11.55□□□□□ -0.56
CPSF7-201ENST00000340437 CBY3A6NI87 242 aa11.55□□□□□ -0.56
CPSF7-201ENST00000340437 VAMP3Q15836 100 aa11.55□□□□□ -0.56
CPSF7-201ENST00000340437 RPP21Q9H633 154 aaKnown RBP11.55□□□□□ -0.56
CPSF7-201ENST00000340437 RNF24Q9Y225 148 aa11.55□□□□□ -0.56
CPSF7-201ENST00000340437 ZFP30Q9Y2G7 519 aa11.55□□□□□ -0.56
CPSF7-201ENST00000340437 SERTM2A0A1B0GWG4 89 aa11.54□□□□□ -0.56
CPSF7-201ENST00000340437 NDUFB8O95169 186 aa11.54□□□□□ -0.56
CPSF7-201ENST00000340437 FXYD7P58549 80 aa11.54□□□□□ -0.56
CPSF7-201ENST00000340437 LINC01560Q8TB33 94 aa11.54□□□□□ -0.56
CPSF7-201ENST00000340437 A0A1B0GWJ7 208 aa11.54□□□□□ -0.56
CPSF7-201ENST00000340437 C17orf77Q96MU5 243 aa11.54□□□□□ -0.56
CPSF7-201ENST00000340437 LRBAP50851 2863 aa11.54□□□□□ -0.56
CPSF7-201ENST00000340437 LOC389332A0A1B0GUA5 103 aa11.54□□□□□ -0.56
CPSF7-201ENST00000340437 A8MWL6 223 aa11.54□□□□□ -0.56
CPSF7-201ENST00000340437 LEPROTL1O95214 131 aa11.54□□□□□ -0.56
CPSF7-201ENST00000340437 HTR1DP28221 377 aa11.54□□□□□ -0.56
CPSF7-201ENST00000340437 KLF17Q5JT82 389 aaPredicted RBP11.54□□□□□ -0.56
CPSF7-201ENST00000340437 GTSF1Q8WW33 167 aa11.54□□□□□ -0.56
CPSF7-201ENST00000340437 USP9XQ93008 2570 aaPredicted RBP11.53□□□□□ -0.56
CPSF7-201ENST00000340437 IGHV3OR16-8A0A075B7F1 116 aa11.53□□□□□ -0.56
CPSF7-201ENST00000340437 TRAV9-2A0A087WT02 112 aa11.53□□□□□ -0.56
CPSF7-201ENST00000340437 A0A0G2JNJ9 132 aa11.53□□□□□ -0.56
CPSF7-201ENST00000340437 TMEM178BH3BS89 294 aa11.53□□□□□ -0.56
CPSF7-201ENST00000340437 FAM169BQ8N8A8 192 aa11.53□□□□□ -0.56
CPSF7-201ENST00000340437 SRSF12Q8WXF0 261 aaKnown RBP11.53□□□□□ -0.56
CPSF7-201ENST00000340437 TMEM186Q96B77 213 aa11.53□□□□□ -0.56
CPSF7-201ENST00000340437 TMEM70Q9BUB7 260 aa11.53□□□□□ -0.56
CPSF7-201ENST00000340437 Q9UFV3 132 aa11.53□□□□□ -0.56
CPSF7-201ENST00000340437 ZNF596Q8TC21 504 aa11.53□□□□□ -0.56
CPSF7-201ENST00000340437 IGLV2-23P01705 113 aa11.53□□□□□ -0.56
CPSF7-201ENST00000340437 PSG1P11464 419 aa11.53□□□□□ -0.56
CPSF7-201ENST00000340437 OR8B3Q8NGG8 313 aa11.53□□□□□ -0.56
CPSF7-201ENST00000340437 IGHV3-35A0A0C4DH35 117 aa11.52□□□□□ -0.56
CPSF7-201ENST00000340437 PRSS33Q8NF86 280 aa11.52□□□□□ -0.56
CPSF7-201ENST00000340437 MBD6Q96DN6 1003 aa11.52□□□□□ -0.56
CPSF7-201ENST00000340437 HIGD1AQ9Y241 93 aa11.52□□□□□ -0.56
CPSF7-201ENST00000340437 HILPDAQ9Y5L2 63 aa11.52□□□□□ -0.56
CPSF7-201ENST00000340437 ABCA2Q9BZC7 2435 aa11.52□□□□□ -0.57
CPSF7-201ENST00000340437 MPV17L2Q567V2 206 aa11.52□□□□□ -0.57
CPSF7-201ENST00000340437 TEX36Q5VZQ5 186 aa11.52□□□□□ -0.57
CPSF7-201ENST00000340437 CHRDL1Q9BU40 450 aa11.52□□□□□ -0.57
CPSF7-201ENST00000340437 LOC102724200A0A096LPH7 203 aaPredicted RBP11.51□□□□□ -0.57
CPSF7-201ENST00000340437 CCL25O15444 150 aa11.51□□□□□ -0.57
CPSF7-201ENST00000340437 TCRAP04437 139 aa11.51□□□□□ -0.57
CPSF7-201ENST00000340437 WNK1Q9H4A3 2382 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms