RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 ERVFC1-1P60608 527 aa12.13□□□□□ -0.47
MBD1-203ENST00000339998 Q56UQ5 140 aa12.13□□□□□ -0.47
MBD1-203ENST00000339998 ZNF600Q6ZNG1 722 aa12.13□□□□□ -0.47
MBD1-203ENST00000339998 OR10G8Q8NGN5 311 aa12.13□□□□□ -0.47
MBD1-203ENST00000339998 HIGD1AQ9Y241 93 aa12.13□□□□□ -0.47
MBD1-203ENST00000339998 IFITM10A6NMD0 228 aa12.12□□□□□ -0.47
MBD1-203ENST00000339998 PHOX2AO14813 284 aa12.12□□□□□ -0.47
MBD1-203ENST00000339998 GNG7O60262 68 aa12.12□□□□□ -0.47
MBD1-203ENST00000339998 IGLV2-8P01709 118 aa12.12□□□□□ -0.47
MBD1-203ENST00000339998 TCL1AP56279 114 aa12.12□□□□□ -0.47
MBD1-203ENST00000339998 LINC00518Q8N0U6 118 aa12.12□□□□□ -0.47
MBD1-203ENST00000339998 EXOC3-AS1Q8N2X6 119 aa12.12□□□□□ -0.47
MBD1-203ENST00000339998 TBL2Q9Y4P3 447 aaKnown RBP12.12□□□□□ -0.47
MBD1-203ENST00000339998 ZNF320A2RRD8 509 aa12.12□□□□□ -0.47
MBD1-203ENST00000339998 VWC2LB2RUY7 222 aa12.12□□□□□ -0.47
MBD1-203ENST00000339998 GP9P14770 177 aa12.12□□□□□ -0.47
MBD1-203ENST00000339998 USF2Q15853 346 aaPredicted RBP12.12□□□□□ -0.47
MBD1-203ENST00000339998 PRR31Q5SQ13 230 aa12.12□□□□□ -0.47
MBD1-203ENST00000339998 PRELID1Q9Y255 219 aa12.12□□□□□ -0.47
MBD1-203ENST00000339998 UNQ5815/PRO19632Q6UWF5 114 aa12.12□□□□□ -0.47
MBD1-203ENST00000339998 ZNF491Q8N8L2 437 aa12.12□□□□□ -0.47
MBD1-203ENST00000339998 CHRDL1Q9BU40 450 aa12.12□□□□□ -0.47
MBD1-203ENST00000339998 C7orf69Q9H7B7 122 aa12.12□□□□□ -0.47
MBD1-203ENST00000339998 TRAV8-1A0A0A6YYK1 113 aa12.11□□□□□ -0.47
MBD1-203ENST00000339998 OOSP1A8MZH6 123 aa12.11□□□□□ -0.47
MBD1-203ENST00000339998 PPP5D1E7EU14 171 aa12.11□□□□□ -0.47
MBD1-203ENST00000339998 UBE2CO00762 179 aa12.11□□□□□ -0.47
MBD1-203ENST00000339998 SLC25A5P05141 298 aaKnown RBP12.11□□□□□ -0.47
MBD1-203ENST00000339998 FCGR2BP31994 310 aaPredicted RBP12.11□□□□□ -0.47
MBD1-203ENST00000339998 PRR27Q6MZM9 219 aa12.11□□□□□ -0.47
MBD1-203ENST00000339998 RNF2Q99496 336 aa12.11□□□□□ -0.47
MBD1-203ENST00000339998 PYGO2Q9BRQ0 406 aa12.11□□□□□ -0.47
MBD1-203ENST00000339998 BRS3P32247 399 aa12.11□□□□□ -0.47
MBD1-203ENST00000339998 C9orf152Q5JTZ5 239 aa12.11□□□□□ -0.47
MBD1-203ENST00000339998 PIFOQ8TCI5 191 aa12.11□□□□□ -0.47
MBD1-203ENST00000339998 ZNF586Q9NXT0 402 aa12.11□□□□□ -0.47
MBD1-203ENST00000339998 HELZ2Q9BYK8 2649 aaKnown RBP12.1□□□□□ -0.47
MBD1-203ENST00000339998 PRRC2AP48634 2157 aaKnown RBP12.1□□□□□ -0.47
MBD1-203ENST00000339998 TTC9CQ8N5M4 171 aa12.1□□□□□ -0.47
MBD1-203ENST00000339998 FBXL7Q9UJT9 491 aa12.1□□□□□ -0.47
MBD1-203ENST00000339998 IGF2BP2-AS1Q96M15 143 aa12.1□□□□□ -0.47
MBD1-203ENST00000339998 HIF1ANQ9NWT6 349 aa12.1□□□□□ -0.47
MBD1-203ENST00000339998 IGHV1-69DA0A0B4J2H0 117 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 A0A1B0GUS0 222 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 NPIPB5A8MRT5 1133 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 PEX7O00628 323 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 IGHV1-69P01742 117 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 HIST2H2BCQ6DN03 193 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 RNF125Q96EQ8 232 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 C12orf57Q99622 126 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 GPR61Q9BZJ8 451 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 C21orf62Q9NYP8 219 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 C9JCJ5 164 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 GGCTO75223 188 aaKnown RBP12.09□□□□□ -0.47
MBD1-203ENST00000339998 IMMP2LQ96T52 175 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 SPOCK3Q9BQ16 436 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 Q9H3A6 140 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 SRD5A3Q9H8P0 318 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 SERTAD4Q9NUC0 356 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 MRPL27Q9P0M9 148 aaKnown RBP12.09□□□□□ -0.47
MBD1-203ENST00000339998 AMY1AP04745 511 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 MYCNOSP40205 109 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 Q6ZS46 218 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 SRSF8Q9BRL6 282 aaKnown RBP12.09□□□□□ -0.47
MBD1-203ENST00000339998 V9GYV3 84 aa12.09□□□□□ -0.47
MBD1-203ENST00000339998 IGHV3OR16-13A0A075B7E8 117 aa12.08□□□□□ -0.48
MBD1-203ENST00000339998 IGHV3-74A0A0B4J1X5 117 aa12.08□□□□□ -0.48
MBD1-203ENST00000339998 NDUFS6O75380 124 aaKnown RBP12.08□□□□□ -0.48
MBD1-203ENST00000339998 GPR183P32249 361 aa12.08□□□□□ -0.48
MBD1-203ENST00000339998 ADMP35318 185 aa12.08□□□□□ -0.48
MBD1-203ENST00000339998 PLP1P60201 277 aa12.08□□□□□ -0.48
MBD1-203ENST00000339998 C15orf32Q32M92 178 aa12.08□□□□□ -0.48
MBD1-203ENST00000339998 HLA-DRB1P01911 266 aa12.08□□□□□ -0.48
MBD1-203ENST00000339998 MFAP4P55083 255 aa12.08□□□□□ -0.48
MBD1-203ENST00000339998 OR8I2Q8N0Y5 310 aa12.08□□□□□ -0.48
MBD1-203ENST00000339998 C1RLQ9NZP8 487 aa12.08□□□□□ -0.48
MBD1-203ENST00000339998 CUBNO60494 3623 aa12.07□□□□□ -0.48
MBD1-203ENST00000339998 MSMBP08118 114 aa12.07□□□□□ -0.48
MBD1-203ENST00000339998 SRP14P37108 136 aaKnown RBP12.07□□□□□ -0.48
MBD1-203ENST00000339998 BAGE2Q86Y30 109 aa12.07□□□□□ -0.48
MBD1-203ENST00000339998 EPDR1Q9UM22 224 aa12.07□□□□□ -0.48
MBD1-203ENST00000339998 ZNF98A6NK75 572 aa12.07□□□□□ -0.48
MBD1-203ENST00000339998 CTSGP08311 255 aa12.07□□□□□ -0.48
MBD1-203ENST00000339998 COX6B1P14854 86 aa12.07□□□□□ -0.48
MBD1-203ENST00000339998 CBLN1P23435 193 aa12.07□□□□□ -0.48
MBD1-203ENST00000339998 RPL15P61313 204 aaKnown RBP12.07□□□□□ -0.48
MBD1-203ENST00000339998 RHOGP84095 191 aa12.07□□□□□ -0.48
MBD1-203ENST00000339998 IGFL4Q6B9Z1 124 aa12.07□□□□□ -0.48
MBD1-203ENST00000339998 KCNIP4Q6PIL6 250 aa12.07□□□□□ -0.48
MBD1-203ENST00000339998 C5orf56Q8N8D9 126 aa12.07□□□□□ -0.48
MBD1-203ENST00000339998 ARL2-SNX15V9GYD0 113 aa12.07□□□□□ -0.48
MBD1-203ENST00000339998 IGHV3-66A0A0C4DH42 116 aa12.06□□□□□ -0.48
MBD1-203ENST00000339998 NOL4LQ96MY1 436 aaPredicted RBP12.06□□□□□ -0.48
MBD1-203ENST00000339998 H3BUX3 64 aa12.06□□□□□ -0.48
MBD1-203ENST00000339998 M0R3E3 92 aa12.06□□□□□ -0.48
MBD1-203ENST00000339998 CD99P14209 185 aa12.06□□□□□ -0.48
MBD1-203ENST00000339998 HIST1H1BP16401 226 aaKnown RBP12.06□□□□□ -0.48
MBD1-203ENST00000339998 HOXA5P20719 270 aa12.06□□□□□ -0.48
MBD1-203ENST00000339998 CNN1P51911 297 aaKnown RBP12.06□□□□□ -0.48
MBD1-203ENST00000339998 LINC00322Q6ZN03 302 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms