RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 MYCNOSP40205 109 aa12.96□□□□□ -0.33
LITAF-201ENST00000339430 Q0VG73 95 aa12.96□□□□□ -0.33
LITAF-201ENST00000339430 OR8B3Q8NGG8 313 aa12.96□□□□□ -0.33
LITAF-201ENST00000339430 OR8B2Q96RD0 313 aa12.96□□□□□ -0.33
LITAF-201ENST00000339430 IZUMO1RA6ND01 250 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 OVOL3O00110 214 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 MT-ND6P03923 174 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 COL8A1P27658 744 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 SRIP30626 198 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 LYZP61626 148 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 ARF6P62330 175 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 PAFAH1B2P68402 229 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 LINC00469Q8N7U9 141 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 RCHY1Q96PM5 261 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 HILPDAQ9Y5L2 63 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 ASH1LQ9NR48 2969 aaKnown RBP12.95□□□□□ -0.34
LITAF-201ENST00000339430 A0A1W2PRD5 423 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 A0A1W2PRF3 423 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 A0A1W2PRM7 423 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 TIMM23O14925 209 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 ESDP10768 282 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 EFNA4P52798 201 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 TOMM20LQ6UXN7 152 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 TIMD4Q96H15 378 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 NDUFAF3Q9BU61 184 aa12.95□□□□□ -0.34
LITAF-201ENST00000339430 SPG11Q96JI7 2443 aa12.94□□□□□ -0.34
LITAF-201ENST00000339430 BMPR1BO00238 502 aa12.94□□□□□ -0.34
LITAF-201ENST00000339430 CNIH1O95406 144 aa12.94□□□□□ -0.34
LITAF-201ENST00000339430 PSG1P11464 419 aa12.94□□□□□ -0.34
LITAF-201ENST00000339430 PRR31Q5SQ13 230 aa12.94□□□□□ -0.34
LITAF-201ENST00000339430 STXBP6Q8NFX7 210 aa12.94□□□□□ -0.34
LITAF-201ENST00000339430 CCL19Q99731 98 aa12.94□□□□□ -0.34
LITAF-201ENST00000339430 ZNF331Q9NQX6 463 aaPredicted RBP12.94□□□□□ -0.34
LITAF-201ENST00000339430 RBP4P02753 201 aa12.94□□□□□ -0.34
LITAF-201ENST00000339430 GP9P14770 177 aa12.94□□□□□ -0.34
LITAF-201ENST00000339430 SLAQ13239 276 aa12.94□□□□□ -0.34
LITAF-201ENST00000339430 KLRD1Q13241 179 aa12.94□□□□□ -0.34
LITAF-201ENST00000339430 MMDQ15546 238 aa12.94□□□□□ -0.34
LITAF-201ENST00000339430 TMEM183BQ1AE95 376 aa12.94□□□□□ -0.34
LITAF-201ENST00000339430 TDRG1Q3Y452 100 aa12.94□□□□□ -0.34
LITAF-201ENST00000339430 NUP35Q8NFH5 326 aa12.94□□□□□ -0.34
LITAF-201ENST00000339430 WNT10AQ9GZT5 417 aa12.94□□□□□ -0.34
LITAF-201ENST00000339430 RNF114Q9Y508 228 aa12.94□□□□□ -0.34
LITAF-201ENST00000339430 HELZ2Q9BYK8 2649 aaKnown RBP12.94□□□□□ -0.34
LITAF-201ENST00000339430 LY6LH3BQJ8 138 aa12.93□□□□□ -0.34
LITAF-201ENST00000339430 ZNF253O75346 499 aa12.93□□□□□ -0.34
LITAF-201ENST00000339430 TOX4O94842 621 aa12.93□□□□□ -0.34
LITAF-201ENST00000339430 LIPFP07098 398 aa12.93□□□□□ -0.34
LITAF-201ENST00000339430 USF2Q15853 346 aaPredicted RBP12.93□□□□□ -0.34
LITAF-201ENST00000339430 C8orf46Q8TAG6 207 aa12.93□□□□□ -0.34
LITAF-201ENST00000339430 MBD6Q96DN6 1003 aa12.93□□□□□ -0.34
LITAF-201ENST00000339430 TMEM68Q96MH6 324 aa12.93□□□□□ -0.34
LITAF-201ENST00000339430 HLA-DQA1P01909 254 aa12.93□□□□□ -0.34
LITAF-201ENST00000339430 APCSP02743 223 aa12.93□□□□□ -0.34
LITAF-201ENST00000339430 PRB4P10163 310 aaPredicted RBP12.93□□□□□ -0.34
LITAF-201ENST00000339430 FAM231DQ6ZW35 169 aa12.93□□□□□ -0.34
LITAF-201ENST00000339430 GRAMD2BQ96HH9 432 aa12.93□□□□□ -0.34
LITAF-201ENST00000339430 HIGD1AQ9Y241 93 aa12.93□□□□□ -0.34
LITAF-201ENST00000339430 IGLC1P0CG04 106 aa12.92□□□□□ -0.34
LITAF-201ENST00000339430 PMCHP20382 165 aa12.92□□□□□ -0.34
LITAF-201ENST00000339430 BRS3P32247 399 aa12.92□□□□□ -0.34
LITAF-201ENST00000339430 ZNF600Q6ZNG1 722 aa12.92□□□□□ -0.34
LITAF-201ENST00000339430 SIGLECL1Q8N7X8 197 aa12.92□□□□□ -0.34
LITAF-201ENST00000339430 VN1R17PQ8TDU5 208 aa12.92□□□□□ -0.34
LITAF-201ENST00000339430 NRGNQ92686 78 aa12.92□□□□□ -0.34
LITAF-201ENST00000339430 Q9H3A6 140 aa12.92□□□□□ -0.34
LITAF-201ENST00000339430 I3L2K1 104 aa12.92□□□□□ -0.34
LITAF-201ENST00000339430 FBLN7Q53RD9 439 aa12.92□□□□□ -0.34
LITAF-201ENST00000339430 C1orf194Q5T5A4 169 aa12.92□□□□□ -0.34
LITAF-201ENST00000339430 TPTE2P1Q5T6R2 138 aa12.92□□□□□ -0.34
LITAF-201ENST00000339430 GDF5OSQ5U4N7 250 aa12.92□□□□□ -0.34
LITAF-201ENST00000339430 LINC00322Q6ZN03 302 aaPredicted RBP12.92□□□□□ -0.34
LITAF-201ENST00000339430 C7orf69Q9H7B7 122 aa12.92□□□□□ -0.34
LITAF-201ENST00000339430 S4R3C0 116 aa12.92□□□□□ -0.34
LITAF-201ENST00000339430 HIGD1CA8MV81 97 aa12.91□□□□□ -0.34
LITAF-201ENST00000339430 IGHV4-39P01824 125 aa12.91□□□□□ -0.34
LITAF-201ENST00000339430 HTR1DP28221 377 aa12.91□□□□□ -0.34
LITAF-201ENST00000339430 COX19Q49B96 90 aa12.91□□□□□ -0.34
LITAF-201ENST00000339430 OR10J3Q5JRS4 329 aa12.91□□□□□ -0.34
LITAF-201ENST00000339430 NEU1Q99519 415 aa12.91□□□□□ -0.34
LITAF-201ENST00000339430 RASL11BQ9BPW5 248 aa12.91□□□□□ -0.34
LITAF-201ENST00000339430 SSBP4Q9BWG4 385 aaPredicted RBP12.91□□□□□ -0.34
LITAF-201ENST00000339430 FBXL7Q9UJT9 491 aa12.91□□□□□ -0.34
LITAF-201ENST00000339430 TBL2Q9Y4P3 447 aaKnown RBP12.91□□□□□ -0.34
LITAF-201ENST00000339430 A0A1W2PS18 150 aa12.91□□□□□ -0.34
LITAF-201ENST00000339430 GPX1P07203 203 aa12.91□□□□□ -0.34
LITAF-201ENST00000339430 GPR6P46095 362 aaPredicted RBP12.91□□□□□ -0.34
LITAF-201ENST00000339430 AMTP48728 403 aa12.91□□□□□ -0.34
LITAF-201ENST00000339430 CAMPP49913 170 aa12.91□□□□□ -0.34
LITAF-201ENST00000339430 KRTDAPP60985 99 aa12.91□□□□□ -0.34
LITAF-201ENST00000339430 ATG101Q9BSB4 218 aa12.91□□□□□ -0.34
LITAF-201ENST00000339430 CELSR2Q9HCU4 2923 aa12.91□□□□□ -0.34
LITAF-201ENST00000339430 HIST1H1EP10412 219 aaKnown RBP12.9□□□□□ -0.34
LITAF-201ENST00000339430 TCF24Q7RTU0 167 aa12.9□□□□□ -0.34
LITAF-201ENST00000339430 LY6G5BQ8NDX9 201 aa12.9□□□□□ -0.34
LITAF-201ENST00000339430 GPR82Q96P67 336 aa12.9□□□□□ -0.34
LITAF-201ENST00000339430 SLC25A39Q9BZJ4 359 aaPredicted RBP12.9□□□□□ -0.34
LITAF-201ENST00000339430 TRAV8-1A0A0A6YYK1 113 aa12.89□□□□□ -0.35
LITAF-201ENST00000339430 KIR2DL5BA0A0G2JN68 375 aa12.89□□□□□ -0.35
LITAF-201ENST00000339430 KIR2DL5BA0A0G2JPC4 375 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms