RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 FHITP49789 147 aa11.16□□□□□ -0.62
NIPAL3-202ENST00000339255 TAS2R45P59539 299 aa11.16□□□□□ -0.62
NIPAL3-202ENST00000339255 USF2Q15853 346 aaPredicted RBP11.16□□□□□ -0.62
NIPAL3-202ENST00000339255 FAM122CQ6P4D5 195 aa11.16□□□□□ -0.62
NIPAL3-202ENST00000339255 LINC00305Q7Z4B0 112 aa11.16□□□□□ -0.62
NIPAL3-202ENST00000339255 RAB24Q969Q5 203 aa11.16□□□□□ -0.62
NIPAL3-202ENST00000339255 ZNF414Q96IQ9 312 aa11.16□□□□□ -0.62
NIPAL3-202ENST00000339255 METTL26Q96S19 204 aa11.16□□□□□ -0.62
NIPAL3-202ENST00000339255 SLC25A22Q9H936 323 aa11.16□□□□□ -0.62
NIPAL3-202ENST00000339255 SEPSECSQ9HD40 501 aaKnown RBP11.16□□□□□ -0.62
NIPAL3-202ENST00000339255 RABAC1Q9UI14 185 aa11.16□□□□□ -0.62
NIPAL3-202ENST00000339255 TRAV1-1A0A0B4J248 108 aa11.15□□□□□ -0.62
NIPAL3-202ENST00000339255 H2AFB1P0C5Y9 115 aa11.15□□□□□ -0.62
NIPAL3-202ENST00000339255 CLLU1Q5K131 121 aa11.15□□□□□ -0.62
NIPAL3-202ENST00000339255 PATE2Q6UY27 113 aa11.15□□□□□ -0.62
NIPAL3-202ENST00000339255 OR11H1Q8NG94 326 aa11.15□□□□□ -0.62
NIPAL3-202ENST00000339255 OR1N2Q8NGR9 330 aa11.15□□□□□ -0.62
NIPAL3-202ENST00000339255 TMEM158Q8WZ71 300 aa11.15□□□□□ -0.62
NIPAL3-202ENST00000339255 NARS2Q96I59 477 aaKnown RBP11.15□□□□□ -0.62
NIPAL3-202ENST00000339255 DAZ1Q9NQZ3 744 aaKnown RBP11.15□□□□□ -0.62
NIPAL3-202ENST00000339255 TENM1Q9UKZ4 2725 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 A8MWP6 167 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 K7EMT4 169 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 LGALS9O00182 355 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 HBE1P02100 147 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 NMBP08949 121 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 FHL3Q13643 280 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 DEFB136Q30KP8 78 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 KHDC3LQ587J8 217 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 C18orf65Q6ZTR6 163 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 C8orf86Q6ZUL3 223 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 REC114Q7Z4M0 266 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 C1QL4Q86Z23 238 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 MBD3L1Q8WWY6 194 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 UHRF2Q96PU4 802 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 SHANK2-AS3Q9BTD1 123 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 SLC25A39Q9BZJ4 359 aaPredicted RBP11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 UFC1Q9Y3C8 167 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 A0A1W2PRX2 142 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 ZNF320A2RRD8 509 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 MAP1LC3B2A6NCE7 125 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 NPPCP23582 126 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 CRYBB3P26998 211 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 ZNF726P1Q15940 193 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 PQLC2Q6ZP29 291 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 STXBP6Q8NFX7 210 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 SFT2D1Q8WV19 159 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 C20orf24Q9BUV8 137 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 MAP1LC3BQ9GZQ8 125 aa11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 TECRQ9NZ01 308 aaKnown RBP11.14□□□□□ -0.63
NIPAL3-202ENST00000339255 ADARB2-AS1A8MUL3 147 aa11.13□□□□□ -0.63
NIPAL3-202ENST00000339255 H3BRN7 92 aa11.13□□□□□ -0.63
NIPAL3-202ENST00000339255 CCL24O00175 119 aa11.13□□□□□ -0.63
NIPAL3-202ENST00000339255 C8orf88P0DMB2 117 aa11.13□□□□□ -0.63
NIPAL3-202ENST00000339255 BMI1P35226 326 aa11.13□□□□□ -0.63
NIPAL3-202ENST00000339255 KRTAP10-3P60369 221 aa11.13□□□□□ -0.63
NIPAL3-202ENST00000339255 KLF5Q13887 457 aaPredicted RBP11.13□□□□□ -0.63
NIPAL3-202ENST00000339255 UNQ9165/PRO28630Q6UXU0 137 aa11.13□□□□□ -0.63
NIPAL3-202ENST00000339255 LYPD6BQ8NI32 183 aa11.13□□□□□ -0.63
NIPAL3-202ENST00000339255 CITED1Q99966 193 aa11.13□□□□□ -0.63
NIPAL3-202ENST00000339255 COL6A5A8TX70 2615 aa11.12□□□□□ -0.63
NIPAL3-202ENST00000339255 CXorf1O96002 111 aa11.12□□□□□ -0.63
NIPAL3-202ENST00000339255 STAG3L2P0CL84 134 aa11.12□□□□□ -0.63
NIPAL3-202ENST00000339255 STAG3L3P0CL85 134 aa11.12□□□□□ -0.63
NIPAL3-202ENST00000339255 C1orf194Q5T5A4 169 aa11.12□□□□□ -0.63
NIPAL3-202ENST00000339255 RAX2Q96IS3 184 aa11.12□□□□□ -0.63
NIPAL3-202ENST00000339255 IGHV3OR16-8A0A075B7F1 116 aa11.11□□□□□ -0.63
NIPAL3-202ENST00000339255 ZNF98A6NK75 572 aa11.11□□□□□ -0.63
NIPAL3-202ENST00000339255 SYNJ2BPP57105 145 aa11.11□□□□□ -0.63
NIPAL3-202ENST00000339255 LCN15Q6UWW0 184 aa11.11□□□□□ -0.63
NIPAL3-202ENST00000339255 MIR17HGQ75NE6 70 aa11.11□□□□□ -0.63
NIPAL3-202ENST00000339255 GRAMD2BQ96HH9 432 aa11.11□□□□□ -0.63
NIPAL3-202ENST00000339255 GPR82Q96P67 336 aa11.11□□□□□ -0.63
NIPAL3-202ENST00000339255 PEMTQ9UBM1 199 aa11.11□□□□□ -0.63
NIPAL3-202ENST00000339255 A0A1W2PS18 150 aa11.11□□□□□ -0.63
NIPAL3-202ENST00000339255 ARL14EPLP0DKL9 152 aa11.11□□□□□ -0.63
NIPAL3-202ENST00000339255 NSUN5P1Q3KNT7 163 aa11.11□□□□□ -0.63
NIPAL3-202ENST00000339255 SPATA31B1PQ5VZV4 182 aa11.11□□□□□ -0.63
NIPAL3-202ENST00000339255 SSX7Q7RTT5 188 aa11.11□□□□□ -0.63
NIPAL3-202ENST00000339255 BPIFA4PQ86YQ2 179 aa11.11□□□□□ -0.63
NIPAL3-202ENST00000339255 MARC2Q969Z3 335 aa11.11□□□□□ -0.63
NIPAL3-202ENST00000339255 SCRT1Q9BWW7 348 aa11.11□□□□□ -0.63
NIPAL3-202ENST00000339255 TMEM231Q9H6L2 316 aa11.11□□□□□ -0.63
NIPAL3-202ENST00000339255 U3KQE9 123 aa11.11□□□□□ -0.63
NIPAL3-202ENST00000339255 BUB3O43684 328 aa11.1□□□□□ -0.63
NIPAL3-202ENST00000339255 OR7C2O60412 319 aa11.1□□□□□ -0.63
NIPAL3-202ENST00000339255 RPL7P18124 248 aaKnown RBP11.1□□□□□ -0.63
NIPAL3-202ENST00000339255 MYCNOSP40205 109 aa11.1□□□□□ -0.63
NIPAL3-202ENST00000339255 PSMB3P49720 205 aa11.1□□□□□ -0.63
NIPAL3-202ENST00000339255 SLURP1P55000 103 aa11.1□□□□□ -0.63
NIPAL3-202ENST00000339255 MORN5Q5VZ52 161 aa11.1□□□□□ -0.63
NIPAL3-202ENST00000339255 FAM167A-AS1Q96KT0 104 aa11.1□□□□□ -0.63
NIPAL3-202ENST00000339255 SLC25A2Q9BXI2 301 aa11.1□□□□□ -0.63
NIPAL3-202ENST00000339255 HRH4Q9H3N8 390 aa11.1□□□□□ -0.63
NIPAL3-202ENST00000339255 TMEM14CQ9P0S9 112 aa11.1□□□□□ -0.63
NIPAL3-202ENST00000339255 STAB1Q9NY15 2570 aa11.1□□□□□ -0.63
NIPAL3-202ENST00000339255 IGHV7-4-1A0A0J9YVY3 117 aa11.09□□□□□ -0.63
NIPAL3-202ENST00000339255 PPT1P50897 306 aa11.09□□□□□ -0.63
NIPAL3-202ENST00000339255 OR8I2Q8N0Y5 310 aa11.09□□□□□ -0.63
NIPAL3-202ENST00000339255 OR4F17Q8NGA8 305 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms