RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ZNF207O43670 478 aaKnown RBP5.1□□□□□ -1.59
PRKDC-202ENST00000338368 RPL13AP40429 203 aaKnown RBP5.1□□□□□ -1.59
PRKDC-202ENST00000338368 TDGF1P3P51864 188 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 HBBP68871 147 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 C10orf91Q5T1B1 145 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 IGHV3-66A0A0C4DH42 116 aa5.09□□□□□ -1.59
PRKDC-202ENST00000338368 TCF24Q7RTU0 167 aa5.09□□□□□ -1.59
PRKDC-202ENST00000338368 CNTFRP26992 372 aa5.09□□□□□ -1.59
PRKDC-202ENST00000338368 WT1-ASQ06250 92 aa5.09□□□□□ -1.59
PRKDC-202ENST00000338368 FOXL1Q12952 345 aa5.09□□□□□ -1.59
PRKDC-202ENST00000338368 A0A1W2PPI3 338 aa5.09□□□□□ -1.59
PRKDC-202ENST00000338368 UBE2CO00762 179 aa5.09□□□□□ -1.59
PRKDC-202ENST00000338368 C1QL4Q86Z23 238 aa5.09□□□□□ -1.59
PRKDC-202ENST00000338368 IGHV3-11P01762 117 aa5.09□□□□□ -1.59
PRKDC-202ENST00000338368 KIR3DL3Q8N743 410 aa5.09□□□□□ -1.59
PRKDC-202ENST00000338368 SCRT1Q9BWW7 348 aa5.09□□□□□ -1.59
PRKDC-202ENST00000338368 ZNF738Q8NE65 137 aa5.09□□□□□ -1.59
PRKDC-202ENST00000338368 PLA2G2EQ9NZK7 142 aa5.09□□□□□ -1.59
PRKDC-202ENST00000338368 NDUFS8O00217 210 aa5.09□□□□□ -1.6
PRKDC-202ENST00000338368 TCAPO15273 167 aa5.09□□□□□ -1.6
PRKDC-202ENST00000338368 GRNP28799 593 aaKnown RBP5.09□□□□□ -1.6
PRKDC-202ENST00000338368 CIARTQ8N365 385 aaPredicted RBP5.09□□□□□ -1.6
PRKDC-202ENST00000338368 PCNX3Q9H6A9 2034 aa5.09□□□□□ -1.6
PRKDC-202ENST00000338368 GUSBP1Q15486 140 aa5.09□□□□□ -1.6
PRKDC-202ENST00000338368 RBPMS2Q6ZRY4 209 aaKnown RBP5.09□□□□□ -1.6
PRKDC-202ENST00000338368 CKS2P33552 79 aa5.09□□□□□ -1.6
PRKDC-202ENST00000338368 SLC25A39Q9BZJ4 359 aaPredicted RBP5.09□□□□□ -1.6
PRKDC-202ENST00000338368 NPFFR1Q9GZQ6 430 aa5.09□□□□□ -1.6
PRKDC-202ENST00000338368 SOX21Q9Y651 276 aaPredicted RBP5.09□□□□□ -1.6
PRKDC-202ENST00000338368 FCER1GP30273 86 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 RPS20P60866 119 aaKnown RBP5.08□□□□□ -1.6
PRKDC-202ENST00000338368 C5orf64Q2M2E5 130 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 NDUFS7O75251 213 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 PMS2P5A8MQ11 134 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 PROP1O75360 226 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 MGPP08493 103 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 C12orf54Q6X4T0 127 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 Q6ZN92 141 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 LOC389332A0A1B0GUA5 103 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 ZNF562Q6V9R5 426 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 C11orf42Q8N5U0 333 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 LINC00469Q8N7U9 141 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 PEMTQ9UBM1 199 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 PSG8Q9UQ74 426 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 TRAV40A0A0B4J280 105 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 SNRPD3P62318 126 aaKnown RBP5.08□□□□□ -1.6
PRKDC-202ENST00000338368 COL5A1-AS1Q5SY13 56 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 MUC21A0A0G2JKD1 596 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 MUC21A0A140T8X8 626 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 SHISA9B4DS77 424 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 ADMP35318 185 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 MUC21Q5SSG8 566 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 CENPVQ7Z7K6 275 aaPredicted RBP5.08□□□□□ -1.6
PRKDC-202ENST00000338368 GTSCR1Q86UQ5 136 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 MUC22E2RYF6 1773 aaPredicted RBP5.08□□□□□ -1.6
PRKDC-202ENST00000338368 HLA-DRB1P01911 266 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 HTN1P15515 57 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 SAA4P35542 130 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 PAPPA-AS1Q5QFB9 102 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 EBLN2Q6P2I7 272 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 TPSG1Q9NRR2 321 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 RAI1Q7Z5J4 1906 aaPredicted RBP5.08□□□□□ -1.6
PRKDC-202ENST00000338368 IZUMO1RA6ND01 250 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 LINC01549A6NIU2 74 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 IGLV2-14P01704 120 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 TCTAP57738 103 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 PF4P02776 101 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 DDTP30046 118 aa5.08□□□□□ -1.6
PRKDC-202ENST00000338368 NPFFO15130 113 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 TCRAP04437 139 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 PMCHL1Q16048 86 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 BRD3OSQ6XYD6 125 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 NUDT10Q8NFP7 164 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 NUDT11Q96G61 164 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 A0A1B0GUT8 65 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 TRGV9Q99603 122 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 HIST1H2BLQ99880 126 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 GNB1LQ9BYB4 327 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 LY96Q9Y6Y9 160 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 CA1P00915 261 aaPredicted RBP5.07□□□□□ -1.6
PRKDC-202ENST00000338368 PFN1P07737 140 aaKnown RBP5.07□□□□□ -1.6
PRKDC-202ENST00000338368 PRR20EP86478 221 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 PRR20CP86479 221 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 PRR20DP86480 221 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 PRR20BP86481 221 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 PRR20AP86496 221 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 RPP21Q9H633 154 aaKnown RBP5.07□□□□□ -1.6
PRKDC-202ENST00000338368 PRB4P10163 310 aaPredicted RBP5.07□□□□□ -1.6
PRKDC-202ENST00000338368 DDB2Q92466 427 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 LINC00479Q96M42 142 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 SERF1AO75920 110 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 ZFP30Q9Y2G7 519 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 PTTG1IPP53801 180 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 TMEM136Q6ZRR5 245 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 RNF114Q9Y508 228 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 GPR179Q6PRD1 2367 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 PTPRBP23467 1997 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 SOD3P08294 240 aa5.07□□□□□ -1.6
PRKDC-202ENST00000338368 TRAV41A0A0B4J266 112 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms