RNA–Protein interactions for RNA: ENST00000336119.7

NLRP3-201, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 4,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-201ENST00000336119 TCRAP04437 139 aa7.45□□□□□ -1.22
NLRP3-201ENST00000336119 CNTFRP26992 372 aa7.45□□□□□ -1.22
NLRP3-201ENST00000336119 RELQ04864 619 aaPredicted RBP7.45□□□□□ -1.22
NLRP3-201ENST00000336119 C22orf34Q6ZV56 151 aa7.45□□□□□ -1.22
NLRP3-201ENST00000336119 TCF24Q7RTU0 167 aa7.45□□□□□ -1.22
NLRP3-201ENST00000336119 VMO1Q7Z5L0 202 aa7.45□□□□□ -1.22
NLRP3-201ENST00000336119 LHFPL4Q7Z7J7 247 aa7.45□□□□□ -1.22
NLRP3-201ENST00000336119 EEF1AKMT3Q96AZ1 226 aa7.45□□□□□ -1.22
NLRP3-201ENST00000336119 SLC25A2Q9BXI2 301 aa7.45□□□□□ -1.22
NLRP3-201ENST00000336119 FNDC4Q9H6D8 234 aaPredicted RBP7.45□□□□□ -1.22
NLRP3-201ENST00000336119 IGHV3-35A0A0C4DH35 117 aa7.45□□□□□ -1.22
NLRP3-201ENST00000336119 LEPROTL1O95214 131 aa7.45□□□□□ -1.22
NLRP3-201ENST00000336119 IGHV3-23P01764 117 aa7.45□□□□□ -1.22
NLRP3-201ENST00000336119 ATP5L2Q7Z4Y8 100 aa7.45□□□□□ -1.22
NLRP3-201ENST00000336119 LINC00479Q96M42 142 aa7.45□□□□□ -1.22
NLRP3-201ENST00000336119 NRN1Q9NPD7 142 aa7.45□□□□□ -1.22
NLRP3-201ENST00000336119 SIAH2O43255 324 aa7.45□□□□□ -1.22
NLRP3-201ENST00000336119 OR5AL1P0C617 328 aa7.45□□□□□ -1.22
NLRP3-201ENST00000336119 EFNA4P52798 201 aa7.45□□□□□ -1.22
NLRP3-201ENST00000336119 FOXA3P55318 350 aaPredicted RBP7.45□□□□□ -1.22
NLRP3-201ENST00000336119 SPATA45Q537H7 98 aa7.45□□□□□ -1.22
NLRP3-201ENST00000336119 NDUFAF3Q9BU61 184 aa7.45□□□□□ -1.22
NLRP3-201ENST00000336119 ZNF292O60281 2723 aa7.44□□□□□ -1.22
NLRP3-201ENST00000336119 HCFC1P51610 2035 aa7.44□□□□□ -1.22
NLRP3-201ENST00000336119 CHD3Q12873 2000 aaKnown RBP7.44□□□□□ -1.22
NLRP3-201ENST00000336119 GZMBP10144 247 aa7.44□□□□□ -1.22
NLRP3-201ENST00000336119 ARL3P36405 182 aa7.44□□□□□ -1.22
NLRP3-201ENST00000336119 DLX1P56177 255 aa7.44□□□□□ -1.22
NLRP3-201ENST00000336119 ATP5G2Q06055 141 aa7.44□□□□□ -1.22
NLRP3-201ENST00000336119 CIARTQ8N365 385 aaPredicted RBP7.44□□□□□ -1.22
NLRP3-201ENST00000336119 TMEM116Q8NCL8 245 aa7.44□□□□□ -1.22
NLRP3-201ENST00000336119 PSG8Q9UQ74 426 aa7.44□□□□□ -1.22
NLRP3-201ENST00000336119 PIEZO2Q9H5I5 2752 aa7.44□□□□□ -1.22
NLRP3-201ENST00000336119 FBLL1A6NHQ2 334 aaKnown RBP7.44□□□□□ -1.22
NLRP3-201ENST00000336119 TMEM78Q5T7P6 136 aa7.44□□□□□ -1.22
NLRP3-201ENST00000336119 Q6AWC8 147 aa7.44□□□□□ -1.22
NLRP3-201ENST00000336119 UQCR10Q9UDW1 63 aa7.44□□□□□ -1.22
NLRP3-201ENST00000336119 V9GYV3 84 aa7.44□□□□□ -1.22
NLRP3-201ENST00000336119 ATRXP46100 2492 aa7.44□□□□□ -1.22
NLRP3-201ENST00000336119 INS-IGF2F8WCM5 200 aa7.44□□□□□ -1.22
NLRP3-201ENST00000336119 TCAPO15273 167 aa7.44□□□□□ -1.22
NLRP3-201ENST00000336119 UTF1Q5T230 341 aa7.44□□□□□ -1.22
NLRP3-201ENST00000336119 SMIM12Q96EX1 92 aa7.44□□□□□ -1.22
NLRP3-201ENST00000336119 A0A1B0GW15 77 aa7.43□□□□□ -1.22
NLRP3-201ENST00000336119 ZNF324O75467 553 aaPredicted RBP7.43□□□□□ -1.22
NLRP3-201ENST00000336119 IGHV2-70P01814 119 aa7.43□□□□□ -1.22
NLRP3-201ENST00000336119 GPR183P32249 361 aa7.43□□□□□ -1.22
NLRP3-201ENST00000336119 KLF17Q5JT82 389 aaPredicted RBP7.43□□□□□ -1.22
NLRP3-201ENST00000336119 COA6Q5JTJ3 125 aaKnown RBP7.43□□□□□ -1.22
NLRP3-201ENST00000336119 FAM19A2Q8N3H0 131 aa7.43□□□□□ -1.22
NLRP3-201ENST00000336119 IGLC7A0M8Q6 106 aa7.43□□□□□ -1.22
NLRP3-201ENST00000336119 OR2T8A6NH00 312 aa7.43□□□□□ -1.22
NLRP3-201ENST00000336119 TOMM40O96008 361 aa7.43□□□□□ -1.22
NLRP3-201ENST00000336119 G0S2P27469 103 aa7.43□□□□□ -1.22
NLRP3-201ENST00000336119 ATP5J2P56134 94 aa7.43□□□□□ -1.22
NLRP3-201ENST00000336119 C1orf229Q6ZS94 237 aaPredicted RBP7.43□□□□□ -1.22
NLRP3-201ENST00000336119 PRB1P04280 392 aa7.43□□□□□ -1.22
NLRP3-201ENST00000336119 Q0VG73 95 aa7.43□□□□□ -1.22
NLRP3-201ENST00000336119 TWIST1Q15672 202 aa7.43□□□□□ -1.22
NLRP3-201ENST00000336119 EXOC3-AS1Q8N2X6 119 aa7.43□□□□□ -1.22
NLRP3-201ENST00000336119 NUP35Q8NFH5 326 aa7.43□□□□□ -1.22
NLRP3-201ENST00000336119 SSBP4Q9BWG4 385 aaPredicted RBP7.43□□□□□ -1.22
NLRP3-201ENST00000336119 TLN1Q9Y490 2541 aaKnown RBP7.43□□□□□ -1.22
NLRP3-201ENST00000336119 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.43□□□□□ -1.22
NLRP3-201ENST00000336119 BTF3P20290 206 aaKnown RBP7.42□□□□□ -1.22
NLRP3-201ENST00000336119 ZNF562Q6V9R5 426 aa7.42□□□□□ -1.22
NLRP3-201ENST00000336119 LYPD1Q8N2G4 141 aa7.42□□□□□ -1.22
NLRP3-201ENST00000336119 JKAMPQ9P055 326 aa7.42□□□□□ -1.22
NLRP3-201ENST00000336119 PRSS46E5RG02 174 aa7.42□□□□□ -1.22
NLRP3-201ENST00000336119 RPLP1P05386 114 aaKnown RBP7.42□□□□□ -1.22
NLRP3-201ENST00000336119 FAM231DQ6ZW35 169 aa7.42□□□□□ -1.22
NLRP3-201ENST00000336119 C16orf92Q96LL3 132 aa7.42□□□□□ -1.22
NLRP3-201ENST00000336119 YPEL4Q96NS1 127 aa7.42□□□□□ -1.22
NLRP3-201ENST00000336119 PRORYQ9H606 182 aa7.42□□□□□ -1.22
NLRP3-201ENST00000336119 J3QKU1 62 aa7.42□□□□□ -1.22
NLRP3-201ENST00000336119 K7EN84 100 aa7.42□□□□□ -1.22
NLRP3-201ENST00000336119 CKS2P33552 79 aa7.42□□□□□ -1.22
NLRP3-201ENST00000336119 SCGB2A2Q13296 93 aa7.42□□□□□ -1.22
NLRP3-201ENST00000336119 FXYD5Q96DB9 178 aa7.42□□□□□ -1.22
NLRP3-201ENST00000336119 IGKV1OR2-108A0A075B7D4 117 aa7.41□□□□□ -1.22
NLRP3-201ENST00000336119 A0A1W2PS18 150 aa7.41□□□□□ -1.22
NLRP3-201ENST00000336119 M0QZ24 198 aa7.41□□□□□ -1.22
NLRP3-201ENST00000336119 PF4V1P10720 104 aa7.41□□□□□ -1.22
NLRP3-201ENST00000336119 RPL15P61313 204 aaKnown RBP7.41□□□□□ -1.22
NLRP3-201ENST00000336119 FAM168AQ92567 244 aa7.41□□□□□ -1.22
NLRP3-201ENST00000336119 SHANK2-AS3Q9BTD1 123 aa7.41□□□□□ -1.22
NLRP3-201ENST00000336119 LOC389332A0A1B0GUA5 103 aa7.41□□□□□ -1.22
NLRP3-201ENST00000336119 GRNP28799 593 aaKnown RBP7.41□□□□□ -1.22
NLRP3-201ENST00000336119 SSBP2P81877 361 aaPredicted RBP7.41□□□□□ -1.22
NLRP3-201ENST00000336119 RHOGP84095 191 aa7.41□□□□□ -1.22
NLRP3-201ENST00000336119 COL5A1-AS1Q5SY13 56 aa7.41□□□□□ -1.22
NLRP3-201ENST00000336119 ST6GALNAC6Q969X2 333 aa7.41□□□□□ -1.22
NLRP3-201ENST00000336119 CCL19Q99731 98 aa7.41□□□□□ -1.22
NLRP3-201ENST00000336119 TMEM70Q9BUB7 260 aa7.41□□□□□ -1.22
NLRP3-201ENST00000336119 TRBV20OR9-2A0A075B6H5 130 aa7.41□□□□□ -1.22
NLRP3-201ENST00000336119 IGHV3OR16-10A0A075B7F0 116 aa7.41□□□□□ -1.22
NLRP3-201ENST00000336119 TMEM136Q6ZRR5 245 aa7.41□□□□□ -1.22
NLRP3-201ENST00000336119 AP5S1Q9NUS5 200 aa7.41□□□□□ -1.22
NLRP3-201ENST00000336119 C22orf46C9J442 243 aa7.41□□□□□ -1.22
NLRP3-201ENST00000336119 C1orf194Q5T5A4 169 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms