RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 ZNF137PP52743 207 aa6.93□□□□□ -1.3
TDP1-201ENST00000335725 DEFB134Q4QY38 66 aa6.93□□□□□ -1.3
TDP1-201ENST00000335725 ZNF493Q6ZR52 646 aa6.93□□□□□ -1.3
TDP1-201ENST00000335725 MLST8Q9BVC4 326 aa6.93□□□□□ -1.3
TDP1-201ENST00000335725 FAM240AA0A1B0GVK7 77 aa6.92□□□□□ -1.3
TDP1-201ENST00000335725 OVOL1O14753 267 aa6.92□□□□□ -1.3
TDP1-201ENST00000335725 TIMM23O14925 209 aa6.92□□□□□ -1.3
TDP1-201ENST00000335725 C1orf195Q5TG92 126 aa6.92□□□□□ -1.3
TDP1-201ENST00000335725 Q5XG85 94 aa6.92□□□□□ -1.3
TDP1-201ENST00000335725 KLF16Q9BXK1 252 aaPredicted RBP6.92□□□□□ -1.3
TDP1-201ENST00000335725 AAMDCQ9H7C9 122 aa6.92□□□□□ -1.3
TDP1-201ENST00000335725 KLK5Q9Y337 293 aaPredicted RBP6.92□□□□□ -1.3
TDP1-201ENST00000335725 MYO9BQ13459 2157 aa6.92□□□□□ -1.3
TDP1-201ENST00000335725 LINC01549A6NIU2 74 aa6.92□□□□□ -1.3
TDP1-201ENST00000335725 IGLV3-1P01715 115 aa6.92□□□□□ -1.3
TDP1-201ENST00000335725 RPL13AP40429 203 aaKnown RBP6.92□□□□□ -1.3
TDP1-201ENST00000335725 TMEM155Q4W5P6 130 aa6.92□□□□□ -1.3
TDP1-201ENST00000335725 PCSK4Q6UW60 755 aa6.92□□□□□ -1.3
TDP1-201ENST00000335725 Q8N1Y9 231 aa6.92□□□□□ -1.3
TDP1-201ENST00000335725 TMEM86BQ8N661 226 aa6.92□□□□□ -1.3
TDP1-201ENST00000335725 RITA1Q96K30 269 aa6.92□□□□□ -1.3
TDP1-201ENST00000335725 C20orf173Q96LM9 149 aa6.92□□□□□ -1.3
TDP1-201ENST00000335725 TRBV7-3A0A075B6L6 115 aa6.92□□□□□ -1.3
TDP1-201ENST00000335725 NCBP2LA6PVI3 153 aaKnown RBP6.92□□□□□ -1.3
TDP1-201ENST00000335725 ZNF816Q0VGE8 651 aaPredicted RBP6.92□□□□□ -1.3
TDP1-201ENST00000335725 MYOZ3Q8TDC0 251 aa6.92□□□□□ -1.3
TDP1-201ENST00000335725 PGLYRP4Q96LB8 373 aa6.92□□□□□ -1.3
TDP1-201ENST00000335725 CDX4O14627 284 aaPredicted RBP6.91□□□□□ -1.3
TDP1-201ENST00000335725 RIGQ13278 110 aa6.91□□□□□ -1.3
TDP1-201ENST00000335725 RSPO1Q2MKA7 263 aaPredicted RBP6.91□□□□□ -1.3
TDP1-201ENST00000335725 GOLT1AQ6ZVE7 132 aa6.91□□□□□ -1.3
TDP1-201ENST00000335725 RFESDQ8TAC1 157 aa6.91□□□□□ -1.3
TDP1-201ENST00000335725 MGST2Q99735 147 aa6.91□□□□□ -1.3
TDP1-201ENST00000335725 FAM173AQ9BQD7 235 aa6.91□□□□□ -1.3
TDP1-201ENST00000335725 SLC25A39Q9BZJ4 359 aaPredicted RBP6.91□□□□□ -1.3
TDP1-201ENST00000335725 TRGV11A0A075B6L2 103 aa6.91□□□□□ -1.3
TDP1-201ENST00000335725 IGKV2D-26A0A0A0MRZ7 120 aa6.91□□□□□ -1.3
TDP1-201ENST00000335725 DPM2O94777 84 aa6.91□□□□□ -1.3
TDP1-201ENST00000335725 TCL1BO95988 128 aa6.91□□□□□ -1.3
TDP1-201ENST00000335725 ZNF56Q15929 161 aa6.91□□□□□ -1.3
TDP1-201ENST00000335725 Q6ZSR3 168 aa6.91□□□□□ -1.3
TDP1-201ENST00000335725 CYB5D2Q8WUJ1 264 aa6.91□□□□□ -1.3
TDP1-201ENST00000335725 ZNF488Q96MN9 340 aa6.91□□□□□ -1.3
TDP1-201ENST00000335725 K7EMI3 77 aa6.91□□□□□ -1.3
TDP1-201ENST00000335725 P01737 135 aa6.91□□□□□ -1.3
TDP1-201ENST00000335725 ZNF157P51786 506 aaPredicted RBP6.91□□□□□ -1.3
TDP1-201ENST00000335725 ZNF503Q96F45 646 aa6.91□□□□□ -1.3
TDP1-201ENST00000335725 ZMAT4Q9H898 229 aa6.91□□□□□ -1.3
TDP1-201ENST00000335725 OCIAD1Q9NX40 245 aa6.91□□□□□ -1.3
TDP1-201ENST00000335725 IGHV3OR15-7A0A075B7D8 119 aa6.9□□□□□ -1.3
TDP1-201ENST00000335725 NBR2O15453 112 aa6.9□□□□□ -1.3
TDP1-201ENST00000335725 CD24P25063 80 aa6.9□□□□□ -1.3
TDP1-201ENST00000335725 ZFP2Q6ZN57 461 aa6.9□□□□□ -1.3
TDP1-201ENST00000335725 TMEFF1Q8IYR6 380 aa6.9□□□□□ -1.3
TDP1-201ENST00000335725 DKK2Q9UBU2 259 aa6.9□□□□□ -1.3
TDP1-201ENST00000335725 FOXS1O43638 330 aa6.9□□□□□ -1.3
TDP1-201ENST00000335725 FAM214BQ7L5A3 538 aa6.9□□□□□ -1.3
TDP1-201ENST00000335725 RNF152Q8N8N0 203 aa6.9□□□□□ -1.3
TDP1-201ENST00000335725 LYZL4Q96KX0 146 aa6.9□□□□□ -1.3
TDP1-201ENST00000335725 FOXA2Q9Y261 457 aaPredicted RBP6.9□□□□□ -1.3
TDP1-201ENST00000335725 TRAV13-1A0A0B4J241 112 aa6.9□□□□□ -1.31
TDP1-201ENST00000335725 A0A1W2PRX2 142 aa6.9□□□□□ -1.31
TDP1-201ENST00000335725 K7ENP7 123 aa6.9□□□□□ -1.31
TDP1-201ENST00000335725 PLGLB1Q02325 96 aa6.9□□□□□ -1.31
TDP1-201ENST00000335725 Q6ZPA2 131 aa6.9□□□□□ -1.31
TDP1-201ENST00000335725 NTN5Q8WTR8 489 aaPredicted RBP6.9□□□□□ -1.31
TDP1-201ENST00000335725 BMFQ96LC9 184 aa6.9□□□□□ -1.31
TDP1-201ENST00000335725 MRPL20Q9BYC9 149 aaKnown RBP6.9□□□□□ -1.31
TDP1-201ENST00000335725 LSM7Q9UK45 103 aaKnown RBP6.9□□□□□ -1.31
TDP1-201ENST00000335725 HHLA3Q9XRX5 114 aa6.9□□□□□ -1.31
TDP1-201ENST00000335725 PYGO1Q9Y3Y4 419 aa6.9□□□□□ -1.31
TDP1-201ENST00000335725 AMMECR1Q9Y4X0 333 aaPredicted RBP6.9□□□□□ -1.31
TDP1-201ENST00000335725 LSM4Q9Y4Z0 139 aaKnown RBP6.9□□□□□ -1.31
TDP1-201ENST00000335725 ARID1BQ8NFD5 2236 aaPredicted RBP6.89□□□□□ -1.31
TDP1-201ENST00000335725 TMED7-TICAM2A0A0A6YYA0 188 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 IGKV1D-43A0A0B4J1Z2 117 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 LGALS9O00182 355 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 ZC2HC1BQ5TFG8 222 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 K7EM74 188 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 KLRB1Q12918 225 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 TMEM52BQ4KMG9 183 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 Q71RC1 249 aaPredicted RBP6.89□□□□□ -1.31
TDP1-201ENST00000335725 VN1R4Q7Z5H5 301 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 PLA2G2FQ9BZM2 168 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 CALYQ9NYX4 217 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 HLA-DMBP28068 263 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 CD70P32970 193 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 PFN2P35080 140 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 GTSCR1Q86UQ5 136 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 DTX2Q86UW9 622 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 POM121L12Q8N7R1 296 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 SSMEM1Q8WWF3 244 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 TMEM190Q8WZ59 177 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 TTTY13Q9BZ97 58 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 ZNF492Q9P255 531 aa6.89□□□□□ -1.31
TDP1-201ENST00000335725 ALPK2Q86TB3 2170 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 A0A096LNJ9 63 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 H3BMM0 161 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 ZFAND5O76080 213 aa6.88□□□□□ -1.31
TDP1-201ENST00000335725 IFI27P40305 119 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms