RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 CACNA1HO95180 2353 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 CLDND2Q8NHS1 167 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 GFRA4Q9GZZ7 299 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 DECR2Q9NUI1 292 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 PSG8Q9UQ74 426 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 CCL25O15444 150 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 DEFB103AP81534 67 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 CBLN3Q6UW01 205 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 A0A0D9SEW6 157 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 RPS21P63220 83 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 LINC01620Q4KN68 170 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 TMEM42Q69YG0 159 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 TRPT1Q86TN4 253 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 C18orf32Q8TCD1 76 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 PRSS22Q9GZN4 317 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 TEX48A0A1B0GUV7 120 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 H0YGX0 51 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 EIF4EBP2Q13542 120 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 MRPL2Q5T653 305 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 APRG1Q8IVJ8 170 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 MBD3L2Q8NHZ7 208 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 SLC25A10Q9UBX3 287 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 M0QZQ0 153 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 RPL27AP46776 148 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 C22orf39Q6P5X5 142 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 TMEM252Q8N6L7 170 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 MPC1Q9Y5U8 109 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 NUP210LQ5VU65 1888 aa5.08□□□□□ -1.6
CDC42BPA-201ENST00000334218 ATP1A1-AS1Q5TC04 95 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 FAM104BQ5XKR9 115 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 CLUHP3Q96NS8 147 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 PSG7Q13046 419 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 SLC48A1Q6P1K1 146 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 ZNF236Q9UL36 1845 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 TRAV23DV6A0A075B6W5 121 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 IGLC1P0CG04 106 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 COX7CP15954 63 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 GAS1P54826 345 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 WDR38Q5JTN6 314 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 RASL10AQ92737 203 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 TOMM6Q96B49 74 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 DEFB126Q9BYW3 111 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 RARRES3Q9UL19 164 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 SBF2Q86WG5 1849 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 CFPP27918 469 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 LY6G5CQ5SRR4 150 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 ZNF474Q6S9Z5 364 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 JMJD8Q96S16 334 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 PRSS38A1L453 326 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 TMEM89A2RUT3 159 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 B9A039 149 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 MRPS11P82912 194 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 FGF16O43320 207 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 TRBV19A0A075B6N1 114 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 FFAR1O14842 300 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 GPR75O95800 540 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 FGF6P10767 208 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 GNB1P62873 340 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 PIANPQ8IYJ0 282 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 HIGD1BQ9P298 99 aa5.07□□□□□ -1.6
CDC42BPA-201ENST00000334218 A0A0G2JK05 382 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 FAM90A27PA6NNH2 459 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 IGHMP01871 453 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 TIMP3P35625 211 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 SCN7AQ01118 1682 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 XIRP1Q702N8 1843 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 CTSBP07858 339 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 VDAC2P45880 294 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 ATP5J2P56134 94 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 RNF144BQ7Z419 303 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 SRSF12Q8WXF0 261 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 LINC01587Q99440 93 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 TOGARAM1Q9Y4F4 1720 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 CD300CQ08708 224 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 ARIH2OSQ8N7S6 290 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 WNT6Q9Y6F9 365 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 F8P00451 2351 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 LGALS9CQ6DKI2 356 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 SPSB2Q99619 263 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 ORMDL1Q9P0S3 153 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 FBLN5Q9UBX5 448 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 CSPG4Q6UVK1 2322 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 NLRC5Q86WI3 1866 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 RPL35AP18077 110 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 HAMPP81172 84 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 LGALS9BQ3B8N2 356 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 MAVSQ7Z434 540 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 RFLNBQ8N5W9 214 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 ELSPBP1Q96BH3 223 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 TMEM141Q96I45 108 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 RTBDNQ9BSG5 229 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 ZNF492Q9P255 531 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 IGHV2-5P01817 119 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 RHOHQ15669 191 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 FIZ1Q96SL8 496 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 IGHV3-7P01780 117 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 LYZP61626 148 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 MZB1Q8WU39 189 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 PLPPR2Q96GM1 343 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 CARD19Q96LW7 228 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms