RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 FAM223BA6NKX1 122 aa12.7□□□□□ -0.38
SHOX-201ENST00000334060 B4DEV8 164 aa12.7□□□□□ -0.38
SHOX-201ENST00000334060 CTSGP08311 255 aa12.7□□□□□ -0.38
SHOX-201ENST00000334060 RPL7L1Q6DKI1 246 aaKnown RBP12.7□□□□□ -0.38
SHOX-201ENST00000334060 ZNF343Q6P1L6 599 aa12.7□□□□□ -0.38
SHOX-201ENST00000334060 FAM223AQ8IWN6 122 aa12.7□□□□□ -0.38
SHOX-201ENST00000334060 BRI3O95415 125 aa12.69□□□□□ -0.38
SHOX-201ENST00000334060 IGLC1P0CG04 106 aa12.69□□□□□ -0.38
SHOX-201ENST00000334060 SLURP1P55000 103 aa12.69□□□□□ -0.38
SHOX-201ENST00000334060 RPP30P78346 268 aaKnown RBP12.69□□□□□ -0.38
SHOX-201ENST00000334060 TMEM158Q8WZ71 300 aa12.69□□□□□ -0.38
SHOX-201ENST00000334060 RAX2Q96IS3 184 aa12.69□□□□□ -0.38
SHOX-201ENST00000334060 UBE2E2Q96LR5 201 aa12.69□□□□□ -0.38
SHOX-201ENST00000334060 EIF5A2Q9GZV4 153 aaKnown RBP12.69□□□□□ -0.38
SHOX-201ENST00000334060 C9JQL5 133 aa12.69□□□□□ -0.38
SHOX-201ENST00000334060 UNQ9165/PRO28630Q6UXU0 137 aa12.69□□□□□ -0.38
SHOX-201ENST00000334060 RCC1LQ96I51 464 aaKnown RBP12.69□□□□□ -0.38
SHOX-201ENST00000334060 MGST2Q99735 147 aa12.69□□□□□ -0.38
SHOX-201ENST00000334060 GINS3Q9BRX5 216 aa12.69□□□□□ -0.38
SHOX-201ENST00000334060 RSG1Q9BU20 258 aa12.69□□□□□ -0.38
SHOX-201ENST00000334060 SLC25A31Q9H0C2 315 aa12.69□□□□□ -0.38
SHOX-201ENST00000334060 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.68□□□□□ -0.38
SHOX-201ENST00000334060 LGALS1P09382 135 aaKnown RBP12.68□□□□□ -0.38
SHOX-201ENST00000334060 RPS10P46783 165 aaKnown RBP12.68□□□□□ -0.38
SHOX-201ENST00000334060 SOHLH1Q5JUK2 328 aa12.68□□□□□ -0.38
SHOX-201ENST00000334060 TMEM116Q8NCL8 245 aa12.68□□□□□ -0.38
SHOX-201ENST00000334060 OR11H1Q8NG94 326 aa12.68□□□□□ -0.38
SHOX-201ENST00000334060 OR4X1Q8NH49 305 aa12.68□□□□□ -0.38
SHOX-201ENST00000334060 VN1R17PQ8TDU5 208 aa12.68□□□□□ -0.38
SHOX-201ENST00000334060 EEF1AKMT3Q96AZ1 226 aa12.68□□□□□ -0.38
SHOX-201ENST00000334060 SH3BGRL3Q9H299 93 aa12.68□□□□□ -0.38
SHOX-201ENST00000334060 DOK5Q9P104 306 aa12.68□□□□□ -0.38
SHOX-201ENST00000334060 DLK1P80370 383 aa12.67□□□□□ -0.38
SHOX-201ENST00000334060 VWC2Q2TAL6 325 aa12.67□□□□□ -0.38
SHOX-201ENST00000334060 USMG5Q96IX5 58 aa12.67□□□□□ -0.38
SHOX-201ENST00000334060 SCRT1Q9BWW7 348 aa12.67□□□□□ -0.38
SHOX-201ENST00000334060 THYN1Q9P016 225 aa12.67□□□□□ -0.38
SHOX-201ENST00000334060 LSM4Q9Y4Z0 139 aaKnown RBP12.67□□□□□ -0.38
SHOX-201ENST00000334060 CORTO00230 105 aa12.67□□□□□ -0.38
SHOX-201ENST00000334060 OR10J1P30954 320 aa12.67□□□□□ -0.38
SHOX-201ENST00000334060 CAMLGP49069 296 aa12.67□□□□□ -0.38
SHOX-201ENST00000334060 OR1L6Q8NGR2 347 aa12.67□□□□□ -0.38
SHOX-201ENST00000334060 SLC35E1Q96K37 410 aa12.67□□□□□ -0.38
SHOX-201ENST00000334060 NEU1Q99519 415 aa12.67□□□□□ -0.38
SHOX-201ENST00000334060 ATP5SQ99766 215 aa12.67□□□□□ -0.38
SHOX-201ENST00000334060 CBY1Q9Y3M2 126 aa12.67□□□□□ -0.38
SHOX-201ENST00000334060 TSSC4Q9Y5U2 329 aaPredicted RBP12.67□□□□□ -0.38
SHOX-201ENST00000334060 A0A1B0GUS0 222 aa12.66□□□□□ -0.38
SHOX-201ENST00000334060 A0A1B0GV90 55 aa12.66□□□□□ -0.38
SHOX-201ENST00000334060 ZNF207O43670 478 aaKnown RBP12.66□□□□□ -0.38
SHOX-201ENST00000334060 GNG7O60262 68 aa12.66□□□□□ -0.38
SHOX-201ENST00000334060 FGF7P21781 194 aa12.66□□□□□ -0.38
SHOX-201ENST00000334060 ARL3P36405 182 aa12.66□□□□□ -0.38
SHOX-201ENST00000334060 MFAP4P55083 255 aa12.66□□□□□ -0.38
SHOX-201ENST00000334060 NDUFA6P56556 154 aa12.66□□□□□ -0.38
SHOX-201ENST00000334060 BAXQ07812 192 aa12.66□□□□□ -0.38
SHOX-201ENST00000334060 GCSAMLQ5JQS6 135 aa12.66□□□□□ -0.38
SHOX-201ENST00000334060 MRPL52Q86TS9 123 aaKnown RBP12.66□□□□□ -0.38
SHOX-201ENST00000334060 HSD17B11Q8NBQ5 300 aa12.66□□□□□ -0.38
SHOX-201ENST00000334060 C4orf3Q8WVX3 66 aa12.66□□□□□ -0.38
SHOX-201ENST00000334060 ISOC2Q96AB3 205 aa12.66□□□□□ -0.38
SHOX-201ENST00000334060 TMEM147Q9BVK8 224 aa12.66□□□□□ -0.38
SHOX-201ENST00000334060 TMEM242Q9NWH2 141 aa12.66□□□□□ -0.38
SHOX-201ENST00000334060 CMYA5Q8N3K9 4069 aa12.66□□□□□ -0.38
SHOX-201ENST00000334060 AGPAT2O15120 278 aa12.65□□□□□ -0.38
SHOX-201ENST00000334060 PLA2G2EQ9NZK7 142 aa12.65□□□□□ -0.38
SHOX-201ENST00000334060 PEF1Q9UBV8 284 aaKnown RBP12.65□□□□□ -0.38
SHOX-201ENST00000334060 WDR83OSQ9Y284 106 aa12.65□□□□□ -0.38
SHOX-201ENST00000334060 A0A0G2JLM5 398 aa12.65□□□□□ -0.38
SHOX-201ENST00000334060 ZFP92A6NM28 416 aa12.65□□□□□ -0.38
SHOX-201ENST00000334060 HBG1P69891 147 aa12.65□□□□□ -0.38
SHOX-201ENST00000334060 HBG2P69892 147 aa12.65□□□□□ -0.38
SHOX-201ENST00000334060 MIC13Q5XKP0 118 aa12.65□□□□□ -0.38
SHOX-201ENST00000334060 C12orf54Q6X4T0 127 aa12.65□□□□□ -0.38
SHOX-201ENST00000334060 TMEM144Q7Z5S9 345 aa12.65□□□□□ -0.38
SHOX-201ENST00000334060 CACNG8Q8WXS5 425 aa12.65□□□□□ -0.38
SHOX-201ENST00000334060 IGHV3-49A0A0A0MS15 119 aa12.64□□□□□ -0.39
SHOX-201ENST00000334060 TRBV7-1A0A0A6YYK4 115 aa12.64□□□□□ -0.39
SHOX-201ENST00000334060 LY86O95711 162 aa12.64□□□□□ -0.39
SHOX-201ENST00000334060 HOXD3P31249 432 aaPredicted RBP12.64□□□□□ -0.39
SHOX-201ENST00000334060 ATP5IP56385 69 aaPredicted RBP12.64□□□□□ -0.39
SHOX-201ENST00000334060 HIST3H2BBQ8N257 126 aa12.64□□□□□ -0.39
SHOX-201ENST00000334060 C3orf56Q8N813 242 aa12.64□□□□□ -0.39
SHOX-201ENST00000334060 THAP8Q8NA92 274 aa12.64□□□□□ -0.39
SHOX-201ENST00000334060 OR10G4Q8NGN3 311 aa12.64□□□□□ -0.39
SHOX-201ENST00000334060 OR10D4PQ8NGN7 298 aa12.64□□□□□ -0.39
SHOX-201ENST00000334060 GGTLC1Q9BX51 225 aa12.64□□□□□ -0.39
SHOX-201ENST00000334060 WDR61Q9GZS3 305 aaKnown RBP12.64□□□□□ -0.39
SHOX-201ENST00000334060 IGHV3OR16-13A0A075B7E8 117 aa12.63□□□□□ -0.39
SHOX-201ENST00000334060 IGHV3-74A0A0B4J1X5 117 aa12.63□□□□□ -0.39
SHOX-201ENST00000334060 YIF1AO95070 293 aa12.63□□□□□ -0.39
SHOX-201ENST00000334060 PSG1P11464 419 aa12.63□□□□□ -0.39
SHOX-201ENST00000334060 STPG3Q8N7X2 389 aa12.63□□□□□ -0.39
SHOX-201ENST00000334060 DLX4Q92988 240 aaPredicted RBP12.63□□□□□ -0.39
SHOX-201ENST00000334060 VSIRQ9H7M9 311 aa12.63□□□□□ -0.39
SHOX-201ENST00000334060 NPVFQ9HCQ7 196 aa12.63□□□□□ -0.39
SHOX-201ENST00000334060 PUS1Q9Y606 427 aaKnown RBP eCLIP12.63□□□□□ -0.39
SHOX-201ENST00000334060 TCAPO15273 167 aa12.63□□□□□ -0.39
SHOX-201ENST00000334060 AKR1C3P42330 323 aa12.63□□□□□ -0.39
SHOX-201ENST00000334060 SYNJ2BPP57105 145 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms