RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 NBASA2RRP1 2371 aa9.66□□□□□ -0.86
LIMK2-202ENST00000333611 P01737 135 aa9.66□□□□□ -0.86
LIMK2-202ENST00000333611 PRSS1P07477 247 aa9.66□□□□□ -0.86
LIMK2-202ENST00000333611 MS4A6AQ9H2W1 248 aa9.66□□□□□ -0.86
LIMK2-202ENST00000333611 TMEM167BQ9NRX6 74 aa9.66□□□□□ -0.86
LIMK2-202ENST00000333611 SPRR3Q9UBC9 169 aa9.66□□□□□ -0.86
LIMK2-202ENST00000333611 TCF19Q9Y242 345 aa9.66□□□□□ -0.86
LIMK2-202ENST00000333611 CYSLTR1Q9Y271 337 aa9.66□□□□□ -0.86
LIMK2-202ENST00000333611 C9JCJ5 164 aa9.65□□□□□ -0.86
LIMK2-202ENST00000333611 WISP2O76076 250 aa9.65□□□□□ -0.86
LIMK2-202ENST00000333611 ERVK11-1P61568 191 aa9.65□□□□□ -0.86
LIMK2-202ENST00000333611 HES4Q9HCC6 221 aa9.65□□□□□ -0.86
LIMK2-202ENST00000333611 PCNX2A6NKB5 2137 aa9.65□□□□□ -0.86
LIMK2-202ENST00000333611 RIF1Q5UIP0 2472 aaKnown RBP9.65□□□□□ -0.86
LIMK2-202ENST00000333611 SPRY3O43610 288 aa9.65□□□□□ -0.86
LIMK2-202ENST00000333611 PRDX2P32119 198 aa9.65□□□□□ -0.86
LIMK2-202ENST00000333611 OPRK1P41145 380 aa9.65□□□□□ -0.86
LIMK2-202ENST00000333611 MLANAQ16655 118 aa9.65□□□□□ -0.86
LIMK2-202ENST00000333611 ZBTB34Q8NCN2 500 aa9.65□□□□□ -0.86
LIMK2-202ENST00000333611 OSR1Q8TAX0 266 aaPredicted RBP9.65□□□□□ -0.86
LIMK2-202ENST00000333611 ARRDC1-AS1Q9H2J1 176 aa9.65□□□□□ -0.86
LIMK2-202ENST00000333611 KLF13Q9Y2Y9 288 aaPredicted RBP9.65□□□□□ -0.86
LIMK2-202ENST00000333611 KMT2EQ8IZD2 1858 aa9.65□□□□□ -0.86
LIMK2-202ENST00000333611 NKX2-8O15522 239 aa9.65□□□□□ -0.87
LIMK2-202ENST00000333611 C8orf86Q6ZUL3 223 aa9.65□□□□□ -0.87
LIMK2-202ENST00000333611 RND1Q92730 232 aa9.65□□□□□ -0.87
LIMK2-202ENST00000333611 COL25A1Q9BXS0 654 aaPredicted RBP9.65□□□□□ -0.87
LIMK2-202ENST00000333611 TTC28Q96AY4 2481 aa9.65□□□□□ -0.87
LIMK2-202ENST00000333611 PRSS29PA6NIE9 313 aa9.64□□□□□ -0.87
LIMK2-202ENST00000333611 NPIPB5A8MRT5 1133 aa9.64□□□□□ -0.87
LIMK2-202ENST00000333611 SMAD7O15105 426 aaKnown RBP9.64□□□□□ -0.87
LIMK2-202ENST00000333611 CCL11P51671 97 aa9.64□□□□□ -0.87
LIMK2-202ENST00000333611 PTH2Q96A98 100 aa9.64□□□□□ -0.87
LIMK2-202ENST00000333611 ZNRD1Q9P1U0 126 aa9.64□□□□□ -0.87
LIMK2-202ENST00000333611 PTPRZ1P23471 2315 aaPredicted RBP9.64□□□□□ -0.87
LIMK2-202ENST00000333611 COL8A1P27658 744 aa9.64□□□□□ -0.87
LIMK2-202ENST00000333611 DUTP33316 252 aaKnown RBP9.64□□□□□ -0.87
LIMK2-202ENST00000333611 SLC35E4Q6ICL7 350 aa9.64□□□□□ -0.87
LIMK2-202ENST00000333611 TMEM178AQ8NBL3 297 aa9.64□□□□□ -0.87
LIMK2-202ENST00000333611 GAGE5Q13069 117 aa9.63□□□□□ -0.87
LIMK2-202ENST00000333611 GAGE6Q13070 117 aa9.63□□□□□ -0.87
LIMK2-202ENST00000333611 CD177Q8N6Q3 437 aa9.63□□□□□ -0.87
LIMK2-202ENST00000333611 SPTA1P02549 2419 aa9.63□□□□□ -0.87
LIMK2-202ENST00000333611 SS18L1O75177 396 aaPredicted RBP9.63□□□□□ -0.87
LIMK2-202ENST00000333611 ZNF766Q5HY98 468 aa9.63□□□□□ -0.87
LIMK2-202ENST00000333611 TEX29Q8N6K0 151 aa9.63□□□□□ -0.87
LIMK2-202ENST00000333611 ZNF414Q96IQ9 312 aa9.63□□□□□ -0.87
LIMK2-202ENST00000333611 CXXC4Q9H2H0 198 aa9.63□□□□□ -0.87
LIMK2-202ENST00000333611 SMIM27A0A1W2PRY6 76 aa9.63□□□□□ -0.87
LIMK2-202ENST00000333611 C3orf36Q3SXR2 165 aa9.63□□□□□ -0.87
LIMK2-202ENST00000333611 MOGAT3Q86VF5 341 aa9.63□□□□□ -0.87
LIMK2-202ENST00000333611 Q8TCH9 128 aa9.63□□□□□ -0.87
LIMK2-202ENST00000333611 GRAMD2BQ96HH9 432 aa9.63□□□□□ -0.87
LIMK2-202ENST00000333611 HIST1H4GQ99525 98 aa9.63□□□□□ -0.87
LIMK2-202ENST00000333611 C1QTNF4Q9BXJ3 329 aa9.63□□□□□ -0.87
LIMK2-202ENST00000333611 SPANXB1Q9NS25 103 aaPredicted RBP9.63□□□□□ -0.87
LIMK2-202ENST00000333611 GFRA3O60609 400 aa9.62□□□□□ -0.87
LIMK2-202ENST00000333611 APELAP0DMC3 54 aa9.62□□□□□ -0.87
LIMK2-202ENST00000333611 ORM2P19652 201 aa9.62□□□□□ -0.87
LIMK2-202ENST00000333611 PRTN3P24158 256 aa9.62□□□□□ -0.87
LIMK2-202ENST00000333611 PSMB2P49721 201 aa9.62□□□□□ -0.87
LIMK2-202ENST00000333611 TMEM249Q2WGJ8 235 aa9.62□□□□□ -0.87
LIMK2-202ENST00000333611 TMEM95Q3KNT9 176 aa9.62□□□□□ -0.87
LIMK2-202ENST00000333611 URB1-AS1Q96HZ7 61 aa9.62□□□□□ -0.87
LIMK2-202ENST00000333611 PROP1O75360 226 aa9.62□□□□□ -0.87
LIMK2-202ENST00000333611 GTSCR1Q86UQ5 136 aa9.62□□□□□ -0.87
LIMK2-202ENST00000333611 FER1L6-AS2Q96M78 137 aa9.62□□□□□ -0.87
LIMK2-202ENST00000333611 NAV3Q8IVL0 2385 aa9.62□□□□□ -0.87
LIMK2-202ENST00000333611 COX7A2P2O60397 106 aa9.62□□□□□ -0.87
LIMK2-202ENST00000333611 REG1BP48304 166 aa9.62□□□□□ -0.87
LIMK2-202ENST00000333611 ZNF134P52741 427 aa9.62□□□□□ -0.87
LIMK2-202ENST00000333611 TTC32Q5I0X7 151 aa9.62□□□□□ -0.87
LIMK2-202ENST00000333611 CFAP47Q6ZTR5 3102 aa9.62□□□□□ -0.87
LIMK2-202ENST00000333611 DPF1Q92782 380 aa9.61□□□□□ -0.87
LIMK2-202ENST00000333611 IGHV3-21A0A0B4J1V1 117 aa9.61□□□□□ -0.87
LIMK2-202ENST00000333611 LTAP01374 205 aa9.61□□□□□ -0.87
LIMK2-202ENST00000333611 CECR9P0C854 216 aa9.61□□□□□ -0.87
LIMK2-202ENST00000333611 FAM106CPP0CH98 169 aa9.61□□□□□ -0.87
LIMK2-202ENST00000333611 FAM106AQ4KMX7 169 aa9.61□□□□□ -0.87
LIMK2-202ENST00000333611 RBMXL3Q8N7X1 1067 aaKnown RBP9.61□□□□□ -0.87
LIMK2-202ENST00000333611 NDFIP1Q9BT67 221 aa9.61□□□□□ -0.87
LIMK2-202ENST00000333611 PIEZO2Q9H5I5 2752 aa9.61□□□□□ -0.87
LIMK2-202ENST00000333611 MED13LQ71F56 2210 aa9.61□□□□□ -0.87
LIMK2-202ENST00000333611 PGPA6NDG6 321 aa9.61□□□□□ -0.87
LIMK2-202ENST00000333611 IQCF6A8MYZ5 107 aa9.61□□□□□ -0.87
LIMK2-202ENST00000333611 DUX4L9Q6RFH8 374 aaPredicted RBP9.61□□□□□ -0.87
LIMK2-202ENST00000333611 C11orf53Q8IXP5 236 aa9.61□□□□□ -0.87
LIMK2-202ENST00000333611 Q8N7P7 452 aa9.61□□□□□ -0.87
LIMK2-202ENST00000333611 OR9G1Q8NH87 305 aa9.61□□□□□ -0.87
LIMK2-202ENST00000333611 RAB1CQ92928 201 aa9.61□□□□□ -0.87
LIMK2-202ENST00000333611 PRELID3AQ96N28 172 aa9.61□□□□□ -0.87
LIMK2-202ENST00000333611 IDI2-AS1Q9NZ38 188 aa9.61□□□□□ -0.87
LIMK2-202ENST00000333611 A6NJY4 79 aa9.6□□□□□ -0.87
LIMK2-202ENST00000333611 MPDU1O75352 247 aa9.6□□□□□ -0.87
LIMK2-202ENST00000333611 P0C879 139 aa9.6□□□□□ -0.87
LIMK2-202ENST00000333611 IFI27P40305 119 aaPredicted RBP9.6□□□□□ -0.87
LIMK2-202ENST00000333611 ZFAND6Q6FIF0 208 aa9.6□□□□□ -0.87
LIMK2-202ENST00000333611 OR5AN1Q8NGI8 311 aa9.6□□□□□ -0.87
LIMK2-202ENST00000333611 CACNA1BQ00975 2339 aa9.6□□□□□ -0.87
LIMK2-202ENST00000333611 TRAV8-1A0A0A6YYK1 113 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms