RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 SOX21Q9Y651 276 aaPredicted RBP18.94■□□□□ 0.62
TSKU-201ENST00000333090 TAX1BP3O14907 124 aa18.94■□□□□ 0.62
TSKU-201ENST00000333090 BVES-AS1Q5T3Y7 98 aa18.94■□□□□ 0.62
TSKU-201ENST00000333090 Q9H3A6 140 aa18.94■□□□□ 0.62
TSKU-201ENST00000333090 MUC21A0A0G2JKD1 596 aa18.93■□□□□ 0.62
TSKU-201ENST00000333090 MUC21A0A140T8X8 626 aa18.93■□□□□ 0.62
TSKU-201ENST00000333090 MBD3L4A6NDZ8 208 aaPredicted RBP18.93■□□□□ 0.62
TSKU-201ENST00000333090 MBD3L3A6NE82 208 aaPredicted RBP18.93■□□□□ 0.62
TSKU-201ENST00000333090 MBD3L5A6NJ08 208 aaPredicted RBP18.93■□□□□ 0.62
TSKU-201ENST00000333090 TCRAP04437 139 aa18.93■□□□□ 0.62
TSKU-201ENST00000333090 MUC21Q5SSG8 566 aa18.93■□□□□ 0.62
TSKU-201ENST00000333090 OR4A5Q8NH83 315 aa18.93■□□□□ 0.62
TSKU-201ENST00000333090 MBD3L2Q8NHZ7 208 aaPredicted RBP18.93■□□□□ 0.62
TSKU-201ENST00000333090 LOC102724200A0A096LPH7 203 aaPredicted RBP18.93■□□□□ 0.62
TSKU-201ENST00000333090 TRAV8-1A0A0A6YYK1 113 aa18.93■□□□□ 0.62
TSKU-201ENST00000333090 IGLV2-23P01705 113 aa18.93■□□□□ 0.62
TSKU-201ENST00000333090 PMCHL2Q9BQD1 86 aa18.93■□□□□ 0.62
TSKU-201ENST00000333090 CSN3P07498 182 aa18.92■□□□□ 0.62
TSKU-201ENST00000333090 TEX36Q5VZQ5 186 aa18.92■□□□□ 0.62
TSKU-201ENST00000333090 H1FXQ92522 213 aaKnown RBP18.92■□□□□ 0.62
TSKU-201ENST00000333090 MAP1LC3CQ9BXW4 147 aa18.92■□□□□ 0.62
TSKU-201ENST00000333090 RNF24Q9Y225 148 aa18.92■□□□□ 0.62
TSKU-201ENST00000333090 OR2T8A6NH00 312 aa18.92■□□□□ 0.62
TSKU-201ENST00000333090 LIPFP07098 398 aa18.92■□□□□ 0.62
TSKU-201ENST00000333090 COL8A1P27658 744 aa18.92■□□□□ 0.62
TSKU-201ENST00000333090 ANKRD39Q53RE8 183 aa18.92■□□□□ 0.62
TSKU-201ENST00000333090 TMEM200BQ69YZ2 307 aa18.92■□□□□ 0.62
TSKU-201ENST00000333090 C22orf34Q6ZV56 151 aa18.92■□□□□ 0.62
TSKU-201ENST00000333090 RITA1Q96K30 269 aa18.92■□□□□ 0.62
TSKU-201ENST00000333090 ZNF492Q9P255 531 aa18.92■□□□□ 0.62
TSKU-201ENST00000333090 RELNP78509 3460 aa18.92■□□□□ 0.62
TSKU-201ENST00000333090 CBY3A6NI87 242 aa18.91■□□□□ 0.62
TSKU-201ENST00000333090 TOX4O94842 621 aa18.91■□□□□ 0.62
TSKU-201ENST00000333090 SAPCD1Q5SSQ6 148 aa18.91■□□□□ 0.62
TSKU-201ENST00000333090 GP9P14770 177 aa18.91■□□□□ 0.62
TSKU-201ENST00000333090 IGFL2Q6UWQ7 119 aa18.9■□□□□ 0.62
TSKU-201ENST00000333090 CIARTQ8N365 385 aaPredicted RBP18.9■□□□□ 0.62
TSKU-201ENST00000333090 NDFIP1Q9BT67 221 aa18.9■□□□□ 0.62
TSKU-201ENST00000333090 GFRA4Q9GZZ7 299 aa18.9■□□□□ 0.62
TSKU-201ENST00000333090 IGHV3-72A0A0B4J1Y9 119 aa18.89■□□□□ 0.62
TSKU-201ENST00000333090 VMA21Q3ZAQ7 101 aa18.89■□□□□ 0.62
TSKU-201ENST00000333090 ETFRF1Q6IPR1 90 aa18.89■□□□□ 0.62
TSKU-201ENST00000333090 SCRT2Q9NQ03 307 aa18.89■□□□□ 0.62
TSKU-201ENST00000333090 ENSAO43768 121 aaKnown RBP18.89■□□□□ 0.61
TSKU-201ENST00000333090 FCN3O75636 299 aa18.89■□□□□ 0.61
TSKU-201ENST00000333090 MEF2CQ06413 473 aaPredicted RBP18.89■□□□□ 0.61
TSKU-201ENST00000333090 C12orf54Q6X4T0 127 aa18.89■□□□□ 0.61
TSKU-201ENST00000333090 DEFB125Q8N687 156 aa18.89■□□□□ 0.61
TSKU-201ENST00000333090 GSX1Q9H4S2 264 aaPredicted RBP18.89■□□□□ 0.61
TSKU-201ENST00000333090 ANKRD11Q6UB99 2663 aaPredicted RBP18.88■□□□□ 0.61
TSKU-201ENST00000333090 Q71RC1 249 aaPredicted RBP18.88■□□□□ 0.61
TSKU-201ENST00000333090 TMUB1Q9BVT8 246 aa18.88■□□□□ 0.61
TSKU-201ENST00000333090 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.88■□□□□ 0.61
TSKU-201ENST00000333090 OR5AL1P0C617 328 aa18.88■□□□□ 0.61
TSKU-201ENST00000333090 RHOGP84095 191 aa18.88■□□□□ 0.61
TSKU-201ENST00000333090 TRGV9Q99603 122 aa18.88■□□□□ 0.61
TSKU-201ENST00000333090 A0A087X0K7 114 aa18.87■□□□□ 0.61
TSKU-201ENST00000333090 HTR1DP28221 377 aa18.87■□□□□ 0.61
TSKU-201ENST00000333090 FAM27E3Q08E93 113 aa18.87■□□□□ 0.61
TSKU-201ENST00000333090 PET117Q6UWS5 81 aa18.87■□□□□ 0.61
TSKU-201ENST00000333090 TMEM186Q96B77 213 aa18.87■□□□□ 0.61
TSKU-201ENST00000333090 PSG1P11464 419 aa18.87■□□□□ 0.61
TSKU-201ENST00000333090 LDLRAD2Q5SZI1 272 aa18.87■□□□□ 0.61
TSKU-201ENST00000333090 PRNTQ86SH4 94 aa18.87■□□□□ 0.61
TSKU-201ENST00000333090 Q86TA4 180 aa18.87■□□□□ 0.61
TSKU-201ENST00000333090 CRYGCP07315 174 aa18.87■□□□□ 0.61
TSKU-201ENST00000333090 COTL1Q14019 142 aa18.87■□□□□ 0.61
TSKU-201ENST00000333090 HSPB8Q9UJY1 196 aa18.87■□□□□ 0.61
TSKU-201ENST00000333090 PKDREJQ9NTG1 2253 aa18.86■□□□□ 0.61
TSKU-201ENST00000333090 CD40P25942 277 aa18.86■□□□□ 0.61
TSKU-201ENST00000333090 AMMECR1LQ6DCA0 310 aa18.86■□□□□ 0.61
TSKU-201ENST00000333090 FAM215AQ9Y5M1 114 aa18.86■□□□□ 0.61
TSKU-201ENST00000333090 GOLT1AQ6ZVE7 132 aa18.86■□□□□ 0.61
TSKU-201ENST00000333090 EXOC3-AS1Q8N2X6 119 aa18.85■□□□□ 0.61
TSKU-201ENST00000333090 C8orf46Q8TAG6 207 aa18.85■□□□□ 0.61
TSKU-201ENST00000333090 FAM231BA6NCW3 169 aa18.85■□□□□ 0.61
TSKU-201ENST00000333090 NPIPB6E9PJ23 425 aa18.85■□□□□ 0.61
TSKU-201ENST00000333090 HLA-DRB1P01911 266 aa18.85■□□□□ 0.61
TSKU-201ENST00000333090 PRB4P10163 310 aaPredicted RBP18.85■□□□□ 0.61
TSKU-201ENST00000333090 TNFRSF1AP19438 455 aa18.85■□□□□ 0.61
TSKU-201ENST00000333090 MRGPRG-AS1Q2M3A8 158 aa18.85■□□□□ 0.61
TSKU-201ENST00000333090 PIP4P1Q86T03 277 aa18.85■□□□□ 0.61
TSKU-201ENST00000333090 LYZP61626 148 aa18.84■□□□□ 0.61
TSKU-201ENST00000333090 TMEM116Q8NCL8 245 aa18.84■□□□□ 0.61
TSKU-201ENST00000333090 PCNX1Q96RV3 2341 aa18.84■□□□□ 0.61
TSKU-201ENST00000333090 HAX1O00165 279 aa18.84■□□□□ 0.61
TSKU-201ENST00000333090 APOHP02749 345 aaPredicted RBP18.84■□□□□ 0.61
TSKU-201ENST00000333090 C3orf36Q3SXR2 165 aa18.84■□□□□ 0.61
TSKU-201ENST00000333090 CST9LQ9H4G1 147 aa18.84■□□□□ 0.61
TSKU-201ENST00000333090 K7EM74 188 aa18.83■□□□□ 0.61
TSKU-201ENST00000333090 SNAI2O43623 268 aa18.83■□□□□ 0.61
TSKU-201ENST00000333090 NEU4Q8WWR8 484 aaPredicted RBP18.83■□□□□ 0.6
TSKU-201ENST00000333090 ASCL2Q99929 193 aa18.83■□□□□ 0.6
TSKU-201ENST00000333090 HIGD1AQ9Y241 93 aa18.83■□□□□ 0.6
TSKU-201ENST00000333090 RPL27AP46776 148 aaKnown RBP18.82■□□□□ 0.6
TSKU-201ENST00000333090 HIST1H1AQ02539 215 aaPredicted RBP18.82■□□□□ 0.6
TSKU-201ENST00000333090 MS4A6AQ9H2W1 248 aa18.82■□□□□ 0.6
TSKU-201ENST00000333090 AP5S1Q9NUS5 200 aa18.82■□□□□ 0.6
TSKU-201ENST00000333090 LYPD2Q6UXB3 125 aa18.82■□□□□ 0.6
TSKU-201ENST00000333090 OTORQ9NRC9 128 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms