RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 RNF125Q96EQ8 232 aa13.17□□□□□ -0.3
RAB28-202ENST00000330852 NUDT15Q9NV35 164 aa13.17□□□□□ -0.3
RAB28-202ENST00000330852 PITX3O75364 302 aa13.16□□□□□ -0.3
RAB28-202ENST00000330852 RAB11AP62491 216 aa13.16□□□□□ -0.3
RAB28-202ENST00000330852 SLC35E1Q96K37 410 aa13.16□□□□□ -0.3
RAB28-202ENST00000330852 ZFP92A6NM28 416 aa13.16□□□□□ -0.3
RAB28-202ENST00000330852 MED6O75586 246 aa13.16□□□□□ -0.3
RAB28-202ENST00000330852 FCN2Q15485 313 aa13.16□□□□□ -0.3
RAB28-202ENST00000330852 C4BPBP20851 252 aa13.15□□□□□ -0.3
RAB28-202ENST00000330852 GAMTQ14353 236 aa13.15□□□□□ -0.3
RAB28-202ENST00000330852 C1orf194Q5T5A4 169 aa13.15□□□□□ -0.3
RAB28-202ENST00000330852 TMED4Q7Z7H5 227 aa13.15□□□□□ -0.3
RAB28-202ENST00000330852 CSNK1G2-AS1Q8NCQ2 148 aa13.15□□□□□ -0.3
RAB28-202ENST00000330852 TMED3Q9Y3Q3 217 aa13.15□□□□□ -0.3
RAB28-202ENST00000330852 TRAV6A0A075B6T7 132 aa13.14□□□□□ -0.31
RAB28-202ENST00000330852 IGHV4-28A0A0C4DH34 117 aa13.14□□□□□ -0.31
RAB28-202ENST00000330852 DEFB4AO15263 64 aa13.14□□□□□ -0.31
RAB28-202ENST00000330852 OR11H7Q8NGC8 314 aa13.14□□□□□ -0.31
RAB28-202ENST00000330852 CIB3Q96Q77 187 aaPredicted RBP13.14□□□□□ -0.31
RAB28-202ENST00000330852 SNRPGP15A8MWD9 76 aa13.13□□□□□ -0.31
RAB28-202ENST00000330852 RBMY1A1P0DJD3 496 aaKnown RBP13.13□□□□□ -0.31
RAB28-202ENST00000330852 RBMY1CP0DJD4 496 aa13.13□□□□□ -0.31
RAB28-202ENST00000330852 NKX2-1P43699 371 aaPredicted RBP13.13□□□□□ -0.31
RAB28-202ENST00000330852 RPP30P78346 268 aaKnown RBP13.13□□□□□ -0.31
RAB28-202ENST00000330852 RBMY1FQ15415 496 aaKnown RBP13.13□□□□□ -0.31
RAB28-202ENST00000330852 X6R8D5 127 aa13.13□□□□□ -0.31
RAB28-202ENST00000330852 H3BMM0 161 aa13.13□□□□□ -0.31
RAB28-202ENST00000330852 SMLR1H3BR10 107 aa13.13□□□□□ -0.31
RAB28-202ENST00000330852 CFDP00746 253 aaPredicted RBP13.13□□□□□ -0.31
RAB28-202ENST00000330852 VAMP1P23763 118 aa13.13□□□□□ -0.31
RAB28-202ENST00000330852 TRGV9Q99603 122 aa13.13□□□□□ -0.31
RAB28-202ENST00000330852 PBDC1Q9BVG4 233 aa13.13□□□□□ -0.31
RAB28-202ENST00000330852 MED28Q9H204 178 aa13.13□□□□□ -0.31
RAB28-202ENST00000330852 IGKV1D-37A0A075B6S9 117 aa13.12□□□□□ -0.31
RAB28-202ENST00000330852 H2AFB2P0C5Z0 115 aa13.12□□□□□ -0.31
RAB28-202ENST00000330852 ID1P41134 155 aa13.12□□□□□ -0.31
RAB28-202ENST00000330852 SAMD13Q5VXD3 122 aa13.12□□□□□ -0.31
RAB28-202ENST00000330852 HYLS1Q96M11 299 aa13.12□□□□□ -0.31
RAB28-202ENST00000330852 NAP1L6A6NFF2 107 aa13.11□□□□□ -0.31
RAB28-202ENST00000330852 SFT2D2O95562 160 aa13.11□□□□□ -0.31
RAB28-202ENST00000330852 HLA-DRB4P13762 266 aa13.11□□□□□ -0.31
RAB28-202ENST00000330852 UBE2MP61081 183 aaKnown RBP13.11□□□□□ -0.31
RAB28-202ENST00000330852 ZNF90Q03938 601 aa13.11□□□□□ -0.31
RAB28-202ENST00000330852 C9orf62Q8N4C0 152 aa13.11□□□□□ -0.31
RAB28-202ENST00000330852 CLUHP3Q96NS8 147 aa13.11□□□□□ -0.31
RAB28-202ENST00000330852 HLA-DRB4X5D2U9 266 aa13.11□□□□□ -0.31
RAB28-202ENST00000330852 HLA-DMBP28068 263 aa13.1□□□□□ -0.31
RAB28-202ENST00000330852 GGNBP1Q5YKI7 109 aa13.1□□□□□ -0.31
RAB28-202ENST00000330852 THAP8Q8NA92 274 aa13.1□□□□□ -0.31
RAB28-202ENST00000330852 C20orf85Q9H1P6 137 aa13.1□□□□□ -0.31
RAB28-202ENST00000330852 TRAV10A0A0B4J240 114 aa13.1□□□□□ -0.31
RAB28-202ENST00000330852 PSMB3P49720 205 aa13.1□□□□□ -0.31
RAB28-202ENST00000330852 SPATA31B1PQ5VZV4 182 aa13.1□□□□□ -0.31
RAB28-202ENST00000330852 CLEC5AQ9NY25 188 aa13.1□□□□□ -0.31
RAB28-202ENST00000330852 SLC45A2Q9UMX9 530 aa13.1□□□□□ -0.31
RAB28-202ENST00000330852 SYNGR2O43760 224 aa13.09□□□□□ -0.31
RAB28-202ENST00000330852 CXCL3P19876 107 aa13.09□□□□□ -0.31
RAB28-202ENST00000330852 S100A7P31151 101 aa13.09□□□□□ -0.31
RAB28-202ENST00000330852 LYZP61626 148 aa13.09□□□□□ -0.31
RAB28-202ENST00000330852 PPP1R1AQ13522 171 aa13.09□□□□□ -0.31
RAB28-202ENST00000330852 RPP25LQ8N5L8 163 aaKnown RBP13.09□□□□□ -0.31
RAB28-202ENST00000330852 ELOA3CA0A087WX78 387 aaPredicted RBP13.08□□□□□ -0.32
RAB28-202ENST00000330852 IGLL5B9A064 214 aa13.08□□□□□ -0.32
RAB28-202ENST00000330852 IAPPP10997 89 aa13.08□□□□□ -0.32
RAB28-202ENST00000330852 FOXI2Q6ZQN5 318 aa13.08□□□□□ -0.32
RAB28-202ENST00000330852 NEU1Q99519 415 aa13.08□□□□□ -0.32
RAB28-202ENST00000330852 XCL2Q9UBD3 114 aa13.08□□□□□ -0.32
RAB28-202ENST00000330852 APLNQ9ULZ1 77 aa13.08□□□□□ -0.32
RAB28-202ENST00000330852 ISLRO14498 428 aa13.08□□□□□ -0.32
RAB28-202ENST00000330852 PRAF2O60831 178 aa13.08□□□□□ -0.32
RAB28-202ENST00000330852 MEOX2P50222 304 aa13.08□□□□□ -0.32
RAB28-202ENST00000330852 OR8I2Q8N0Y5 310 aa13.08□□□□□ -0.32
RAB28-202ENST00000330852 SAV1Q9H4B6 383 aaPredicted RBP13.08□□□□□ -0.32
RAB28-202ENST00000330852 KMT2AQ03164 3969 aa13.07□□□□□ -0.32
RAB28-202ENST00000330852 SMIM9A6NGZ8 99 aa13.07□□□□□ -0.32
RAB28-202ENST00000330852 OR11H4Q8NGC9 324 aa13.07□□□□□ -0.32
RAB28-202ENST00000330852 FLVCR2Q9UPI3 526 aa13.07□□□□□ -0.32
RAB28-202ENST00000330852 HSPB11Q9Y547 144 aa13.07□□□□□ -0.32
RAB28-202ENST00000330852 IGKV1OR2-108A0A075B7D4 117 aa13.06□□□□□ -0.32
RAB28-202ENST00000330852 PRSS46E5RG02 174 aa13.06□□□□□ -0.32
RAB28-202ENST00000330852 WRBO00258 174 aa13.06□□□□□ -0.32
RAB28-202ENST00000330852 SOCS3O14543 225 aa13.06□□□□□ -0.32
RAB28-202ENST00000330852 DEDDO75618 318 aa13.06□□□□□ -0.32
RAB28-202ENST00000330852 HOXB5P09067 269 aa13.06□□□□□ -0.32
RAB28-202ENST00000330852 OR2F1Q13607 317 aa13.06□□□□□ -0.32
RAB28-202ENST00000330852 ZNF705AQ6ZN79 300 aaPredicted RBP13.06□□□□□ -0.32
RAB28-202ENST00000330852 Q6ZTC4 211 aa13.06□□□□□ -0.32
RAB28-202ENST00000330852 ZNF767PQ75MW2 155 aa13.06□□□□□ -0.32
RAB28-202ENST00000330852 COQ8AQ8NI60 647 aa13.06□□□□□ -0.32
RAB28-202ENST00000330852 LINC00052Q96N35 136 aa13.06□□□□□ -0.32
RAB28-202ENST00000330852 RNF126Q9BV68 326 aa13.06□□□□□ -0.32
RAB28-202ENST00000330852 TMEM189A5PLL7 270 aa13.05□□□□□ -0.32
RAB28-202ENST00000330852 G3V3Q6 166 aa13.05□□□□□ -0.32
RAB28-202ENST00000330852 OR4D5Q8NGN0 318 aa13.05□□□□□ -0.32
RAB28-202ENST00000330852 STRAPQ9Y3F4 350 aaKnown RBP13.05□□□□□ -0.32
RAB28-202ENST00000330852 GALR1P47211 349 aa13.05□□□□□ -0.32
RAB28-202ENST00000330852 PAX9P55771 341 aa13.05□□□□□ -0.32
RAB28-202ENST00000330852 ID3Q02535 119 aa13.05□□□□□ -0.32
RAB28-202ENST00000330852 BPIFCQ8NFQ6 507 aa13.05□□□□□ -0.32
RAB28-202ENST00000330852 ZNF431Q8TF32 576 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms