RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 C22orf46C9J442 243 aa16.65■□□□□ 0.26
CMTM4-201ENST00000330687 CD69Q07108 199 aa16.65■□□□□ 0.26
CMTM4-201ENST00000330687 C11orf53Q8IXP5 236 aa16.65■□□□□ 0.26
CMTM4-201ENST00000330687 IGKV3D-15A0A087WSY6 115 aa16.64■□□□□ 0.25
CMTM4-201ENST00000330687 PPIFP30405 207 aaKnown RBP16.64■□□□□ 0.25
CMTM4-201ENST00000330687 ERHP84090 104 aaKnown RBP16.64■□□□□ 0.25
CMTM4-201ENST00000330687 INO80CQ6PI98 192 aaPredicted RBP16.64■□□□□ 0.25
CMTM4-201ENST00000330687 PRNDQ9UKY0 176 aa16.64■□□□□ 0.25
CMTM4-201ENST00000330687 SMAD7O15105 426 aaKnown RBP16.64■□□□□ 0.25
CMTM4-201ENST00000330687 LTBRP36941 435 aa16.64■□□□□ 0.25
CMTM4-201ENST00000330687 OR5A1Q8NGJ0 315 aa16.64■□□□□ 0.25
CMTM4-201ENST00000330687 CXXC4Q9H2H0 198 aa16.64■□□□□ 0.25
CMTM4-201ENST00000330687 C10orf142B7Z368 130 aa16.64■□□□□ 0.25
CMTM4-201ENST00000330687 DUX4L9Q6RFH8 374 aaPredicted RBP16.64■□□□□ 0.25
CMTM4-201ENST00000330687 PPP1R32Q7Z5V6 425 aa16.64■□□□□ 0.25
CMTM4-201ENST00000330687 OR1L4Q8NGR5 311 aa16.64■□□□□ 0.25
CMTM4-201ENST00000330687 FOXA2Q9Y261 457 aaPredicted RBP16.64■□□□□ 0.25
CMTM4-201ENST00000330687 SSUH2Q9Y2M2 353 aa16.64■□□□□ 0.25
CMTM4-201ENST00000330687 CACNA1BQ00975 2339 aa16.64■□□□□ 0.25
CMTM4-201ENST00000330687 ZGRF1Q86YA3 2104 aa16.64■□□□□ 0.25
CMTM4-201ENST00000330687 PATE2Q6UY27 113 aa16.63■□□□□ 0.25
CMTM4-201ENST00000330687 JPT1Q9UK76 154 aa16.63■□□□□ 0.25
CMTM4-201ENST00000330687 FXYD2P54710 66 aa16.63■□□□□ 0.25
CMTM4-201ENST00000330687 EXOC3-AS1Q8N2X6 119 aa16.63■□□□□ 0.25
CMTM4-201ENST00000330687 ZNF414Q96IQ9 312 aa16.63■□□□□ 0.25
CMTM4-201ENST00000330687 SMKR1H3BMG3 65 aa16.63■□□□□ 0.25
CMTM4-201ENST00000330687 NKX2-8O15522 239 aa16.63■□□□□ 0.25
CMTM4-201ENST00000330687 UBALD2Q8IYN6 164 aa16.63■□□□□ 0.25
CMTM4-201ENST00000330687 TTTY12Q9BZ98 90 aa16.63■□□□□ 0.25
CMTM4-201ENST00000330687 H3BMG7 143 aa16.62■□□□□ 0.25
CMTM4-201ENST00000330687 SAA1P0DJI8 122 aaPredicted RBP16.62■□□□□ 0.25
CMTM4-201ENST00000330687 HARBI1Q96MB7 349 aa16.62■□□□□ 0.25
CMTM4-201ENST00000330687 DSCAML1Q8TD84 2053 aa16.62■□□□□ 0.25
CMTM4-201ENST00000330687 FNDC10F2Z333 226 aa16.62■□□□□ 0.25
CMTM4-201ENST00000330687 J3QR89 54 aa16.61■□□□□ 0.25
CMTM4-201ENST00000330687 RNASE2P10153 161 aaKnown RBP16.61■□□□□ 0.25
CMTM4-201ENST00000330687 PPP1R35Q8TAP8 253 aa16.61■□□□□ 0.25
CMTM4-201ENST00000330687 FXYD5Q96DB9 178 aa16.61■□□□□ 0.25
CMTM4-201ENST00000330687 MRPL32Q9BYC8 188 aaKnown RBP16.61■□□□□ 0.25
CMTM4-201ENST00000330687 E7EUB6 86 aa16.61■□□□□ 0.25
CMTM4-201ENST00000330687 PRCDQ00LT1 54 aa16.61■□□□□ 0.25
CMTM4-201ENST00000330687 MRPL36Q9P0J6 103 aaKnown RBP16.61■□□□□ 0.25
CMTM4-201ENST00000330687 DKK2Q9UBU2 259 aa16.61■□□□□ 0.25
CMTM4-201ENST00000330687 A0A1B0GUT8 65 aa16.61■□□□□ 0.25
CMTM4-201ENST00000330687 PSMB11A5LHX3 300 aa16.61■□□□□ 0.25
CMTM4-201ENST00000330687 SPRY3O43610 288 aa16.61■□□□□ 0.25
CMTM4-201ENST00000330687 MOGAT3Q86VF5 341 aa16.61■□□□□ 0.25
CMTM4-201ENST00000330687 ITLN1Q8WWA0 313 aa16.61■□□□□ 0.25
CMTM4-201ENST00000330687 D6R8Y8 96 aa16.6■□□□□ 0.25
CMTM4-201ENST00000330687 INSIG2Q9Y5U4 225 aa16.6■□□□□ 0.25
CMTM4-201ENST00000330687 IGKV1D-17A0A075B6S4 117 aa16.6■□□□□ 0.25
CMTM4-201ENST00000330687 SLC25A17O43808 307 aa16.6■□□□□ 0.25
CMTM4-201ENST00000330687 LTAP01374 205 aa16.6■□□□□ 0.25
CMTM4-201ENST00000330687 CRYBA4P53673 196 aa16.6■□□□□ 0.25
CMTM4-201ENST00000330687 RNFT1Q5M7Z0 435 aa16.6■□□□□ 0.25
CMTM4-201ENST00000330687 DUSP23Q9BVJ7 150 aa16.6■□□□□ 0.25
CMTM4-201ENST00000330687 CFAP47Q6ZTR5 3102 aa16.6■□□□□ 0.25
CMTM4-201ENST00000330687 FAM90A9PA6NNJ1 464 aa16.6■□□□□ 0.25
CMTM4-201ENST00000330687 SVIPQ8NHG7 77 aa16.6■□□□□ 0.25
CMTM4-201ENST00000330687 C19orf24Q9BVV8 132 aa16.6■□□□□ 0.25
CMTM4-201ENST00000330687 Q9H3A6 140 aa16.6■□□□□ 0.25
CMTM4-201ENST00000330687 PRSS1P07477 247 aa16.59■□□□□ 0.25
CMTM4-201ENST00000330687 FTH1P19P0C7X4 201 aa16.59■□□□□ 0.25
CMTM4-201ENST00000330687 IL11RAQ14626 422 aa16.59■□□□□ 0.25
CMTM4-201ENST00000330687 IQCF6A8MYZ5 107 aa16.58■□□□□ 0.25
CMTM4-201ENST00000330687 UPK2O00526 184 aa16.58■□□□□ 0.25
CMTM4-201ENST00000330687 KIR2DS2P43631 304 aa16.58■□□□□ 0.25
CMTM4-201ENST00000330687 LOXL3P58215 753 aa16.58■□□□□ 0.25
CMTM4-201ENST00000330687 FAM169BQ8N8A8 192 aa16.58■□□□□ 0.25
CMTM4-201ENST00000330687 FGF6P10767 208 aa16.58■□□□□ 0.24
CMTM4-201ENST00000330687 INSL3P51460 131 aa16.58■□□□□ 0.24
CMTM4-201ENST00000330687 LYZP61626 148 aa16.58■□□□□ 0.24
CMTM4-201ENST00000330687 CD300EQ496F6 205 aaPredicted RBP16.58■□□□□ 0.24
CMTM4-201ENST00000330687 KBTBD11-OT1A0A1B0GTJ5 212 aa16.58■□□□□ 0.24
CMTM4-201ENST00000330687 NDFIP1Q9BT67 221 aa16.58■□□□□ 0.24
CMTM4-201ENST00000330687 DLL1O00548 723 aa16.57■□□□□ 0.24
CMTM4-201ENST00000330687 ENSAO43768 121 aaKnown RBP16.57■□□□□ 0.24
CMTM4-201ENST00000330687 CCDC144NLQ6NUI1 221 aa16.57■□□□□ 0.24
CMTM4-201ENST00000330687 AMN1Q8IY45 258 aa16.57■□□□□ 0.24
CMTM4-201ENST00000330687 COL25A1Q9BXS0 654 aaPredicted RBP16.57■□□□□ 0.24
CMTM4-201ENST00000330687 LOC400499M0QZD8 3231 aa16.57■□□□□ 0.24
CMTM4-201ENST00000330687 STXBP6Q8NFX7 210 aa16.57■□□□□ 0.24
CMTM4-201ENST00000330687 IGHV3-72A0A0B4J1Y9 119 aa16.57■□□□□ 0.24
CMTM4-201ENST00000330687 SPRNQ5BIV9 151 aa16.57■□□□□ 0.24
CMTM4-201ENST00000330687 TMEM213A2RRL7 107 aa16.56■□□□□ 0.24
CMTM4-201ENST00000330687 LY6G6EA0A0G2JKS1 128 aa16.56■□□□□ 0.24
CMTM4-201ENST00000330687 RIGQ13278 110 aa16.56■□□□□ 0.24
CMTM4-201ENST00000330687 U3KQA8 63 aa16.56■□□□□ 0.24
CMTM4-201ENST00000330687 TCRAP04437 139 aa16.55■□□□□ 0.24
CMTM4-201ENST00000330687 GTSCR1Q86UQ5 136 aa16.55■□□□□ 0.24
CMTM4-201ENST00000330687 BOD1L2Q8IYS8 172 aa16.55■□□□□ 0.24
CMTM4-201ENST00000330687 SMRP1Q8NCR6 262 aa16.55■□□□□ 0.24
CMTM4-201ENST00000330687 PRELID3AQ96N28 172 aa16.55■□□□□ 0.24
CMTM4-201ENST00000330687 VGLL1Q99990 258 aa16.55■□□□□ 0.24
CMTM4-201ENST00000330687 EP300Q09472 2414 aaPredicted RBP16.55■□□□□ 0.24
CMTM4-201ENST00000330687 PCNX1Q96RV3 2341 aa16.55■□□□□ 0.24
CMTM4-201ENST00000330687 IGHV1-2P23083 117 aa16.55■□□□□ 0.24
CMTM4-201ENST00000330687 ADAMTS20P59510 1910 aa16.54■□□□□ 0.24
CMTM4-201ENST00000330687 PATE3B3GLJ2 98 aa16.54■□□□□ 0.24
CMTM4-201ENST00000330687 DDB2Q92466 427 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms