RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 Q6ZWC4 215 aa11.51□□□□□ -0.57
TPM3-206ENST00000330188 VMO1Q7Z5L0 202 aa11.51□□□□□ -0.57
TPM3-206ENST00000330188 WIPF2Q8TF74 440 aaPredicted RBP11.51□□□□□ -0.57
TPM3-206ENST00000330188 FMC1Q96HJ9 113 aa11.51□□□□□ -0.57
TPM3-206ENST00000330188 CHRDL1Q9BU40 450 aa11.51□□□□□ -0.57
TPM3-206ENST00000330188 ZNF586Q9NXT0 402 aa11.51□□□□□ -0.57
TPM3-206ENST00000330188 A8MWP6 167 aa11.51□□□□□ -0.57
TPM3-206ENST00000330188 OR10J3Q5JRS4 329 aa11.51□□□□□ -0.57
TPM3-206ENST00000330188 C1orf122Q6ZSJ8 110 aa11.51□□□□□ -0.57
TPM3-206ENST00000330188 DYNAPQ8N1N2 210 aa11.51□□□□□ -0.57
TPM3-206ENST00000330188 NUP35Q8NFH5 326 aa11.51□□□□□ -0.57
TPM3-206ENST00000330188 RBM14Q96PK6 669 aaKnown RBP11.51□□□□□ -0.57
TPM3-206ENST00000330188 ZNF331Q9NQX6 463 aaPredicted RBP11.51□□□□□ -0.57
TPM3-206ENST00000330188 NAGKQ9UJ70 344 aa11.51□□□□□ -0.57
TPM3-206ENST00000330188 ATRXP46100 2492 aa11.5□□□□□ -0.57
TPM3-206ENST00000330188 LTAP01374 205 aa11.5□□□□□ -0.57
TPM3-206ENST00000330188 ZFP36P26651 326 aaKnown RBP11.5□□□□□ -0.57
TPM3-206ENST00000330188 CDKN1AP38936 164 aa11.5□□□□□ -0.57
TPM3-206ENST00000330188 RASL11AQ6T310 242 aa11.5□□□□□ -0.57
TPM3-206ENST00000330188 KIR3DL3Q8N743 410 aa11.5□□□□□ -0.57
TPM3-206ENST00000330188 TSKUQ8WUA8 353 aa11.5□□□□□ -0.57
TPM3-206ENST00000330188 OTORQ9NRC9 128 aa11.5□□□□□ -0.57
TPM3-206ENST00000330188 NDUFS7O75251 213 aa11.5□□□□□ -0.57
TPM3-206ENST00000330188 LY6DQ14210 128 aa11.5□□□□□ -0.57
TPM3-206ENST00000330188 LINC00322Q6ZN03 302 aaPredicted RBP11.5□□□□□ -0.57
TPM3-206ENST00000330188 TMEM68Q96MH6 324 aa11.5□□□□□ -0.57
TPM3-206ENST00000330188 NEU1Q99519 415 aa11.5□□□□□ -0.57
TPM3-206ENST00000330188 POLR3KQ9Y2Y1 108 aaPredicted RBP11.5□□□□□ -0.57
TPM3-206ENST00000330188 TACC2O95359 2948 aa11.49□□□□□ -0.57
TPM3-206ENST00000330188 ABCA1O95477 2261 aa11.49□□□□□ -0.57
TPM3-206ENST00000330188 H3BRN7 92 aa11.49□□□□□ -0.57
TPM3-206ENST00000330188 APCSP02743 223 aa11.49□□□□□ -0.57
TPM3-206ENST00000330188 HOXB4P17483 251 aaPredicted RBP11.49□□□□□ -0.57
TPM3-206ENST00000330188 CD33P20138 364 aa11.49□□□□□ -0.57
TPM3-206ENST00000330188 SRIP30626 198 aa11.49□□□□□ -0.57
TPM3-206ENST00000330188 SLAQ13239 276 aa11.49□□□□□ -0.57
TPM3-206ENST00000330188 KLF17Q5JT82 389 aaPredicted RBP11.49□□□□□ -0.57
TPM3-206ENST00000330188 LURAP1LQ8IV03 231 aa11.49□□□□□ -0.57
TPM3-206ENST00000330188 SHANK2-AS3Q9BTD1 123 aa11.49□□□□□ -0.57
TPM3-206ENST00000330188 NBASA2RRP1 2371 aa11.49□□□□□ -0.57
TPM3-206ENST00000330188 GDF5OSQ5U4N7 250 aa11.48□□□□□ -0.57
TPM3-206ENST00000330188 CCDC144NLQ6NUI1 221 aa11.48□□□□□ -0.57
TPM3-206ENST00000330188 ZNF491Q8N8L2 437 aa11.48□□□□□ -0.57
TPM3-206ENST00000330188 FANCD2OSQ96PS1 177 aa11.48□□□□□ -0.57
TPM3-206ENST00000330188 HSPB9Q9BQS6 159 aa11.48□□□□□ -0.57
TPM3-206ENST00000330188 ZNF492Q9P255 531 aa11.48□□□□□ -0.57
TPM3-206ENST00000330188 C19orf71A6NCJ1 209 aa11.48□□□□□ -0.57
TPM3-206ENST00000330188 A6NNC1 897 aa11.48□□□□□ -0.57
TPM3-206ENST00000330188 NPIPB5A8MRT5 1133 aa11.48□□□□□ -0.57
TPM3-206ENST00000330188 HIGD1CA8MV81 97 aa11.48□□□□□ -0.57
TPM3-206ENST00000330188 OOSP1A8MZH6 123 aa11.48□□□□□ -0.57
TPM3-206ENST00000330188 BRS3P32247 399 aa11.48□□□□□ -0.57
TPM3-206ENST00000330188 NDPQ00604 133 aa11.48□□□□□ -0.57
TPM3-206ENST00000330188 ZNF562Q6V9R5 426 aa11.48□□□□□ -0.57
TPM3-206ENST00000330188 EXOC3-AS1Q8N2X6 119 aa11.48□□□□□ -0.57
TPM3-206ENST00000330188 Q8N6K4 173 aa11.48□□□□□ -0.57
TPM3-206ENST00000330188 RCHY1Q96PM5 261 aa11.48□□□□□ -0.57
TPM3-206ENST00000330188 SAMD10Q9BYL1 202 aa11.48□□□□□ -0.57
TPM3-206ENST00000330188 PRSS22Q9GZN4 317 aa11.48□□□□□ -0.57
TPM3-206ENST00000330188 RPP21Q9H633 154 aaKnown RBP11.48□□□□□ -0.57
TPM3-206ENST00000330188 IGLV11-55A0A075B6I3 123 aa11.47□□□□□ -0.57
TPM3-206ENST00000330188 VWC2LB2RUY7 222 aa11.47□□□□□ -0.57
TPM3-206ENST00000330188 ZNF253O75346 499 aa11.47□□□□□ -0.57
TPM3-206ENST00000330188 MINOS1Q5TGZ0 78 aa11.47□□□□□ -0.57
TPM3-206ENST00000330188 ARPC1AQ92747 370 aa11.47□□□□□ -0.57
TPM3-206ENST00000330188 RNF125Q96EQ8 232 aa11.47□□□□□ -0.57
TPM3-206ENST00000330188 MINOS1-NBL1R4GNA1 71 aa11.47□□□□□ -0.57
TPM3-206ENST00000330188 S4R3C0 116 aa11.47□□□□□ -0.57
TPM3-206ENST00000330188 COL6A6A6NMZ7 2263 aa11.47□□□□□ -0.57
TPM3-206ENST00000330188 WI2-2373I1.2A0A1W2PRP0 233 aa11.47□□□□□ -0.57
TPM3-206ENST00000330188 GPX1P07203 203 aa11.47□□□□□ -0.57
TPM3-206ENST00000330188 EBI3Q14213 229 aa11.47□□□□□ -0.57
TPM3-206ENST00000330188 Q86TA4 180 aa11.47□□□□□ -0.57
TPM3-206ENST00000330188 BPIFA4PQ86YQ2 179 aa11.47□□□□□ -0.57
TPM3-206ENST00000330188 KCNS1Q96KK3 526 aa11.47□□□□□ -0.57
TPM3-206ENST00000330188 TBX15Q96SF7 602 aa11.47□□□□□ -0.57
TPM3-206ENST00000330188 SIRPDQ9H106 197 aa11.47□□□□□ -0.57
TPM3-206ENST00000330188 TRBV19A0A075B6N1 114 aa11.46□□□□□ -0.57
TPM3-206ENST00000330188 TRAV8-1A0A0A6YYK1 113 aa11.46□□□□□ -0.57
TPM3-206ENST00000330188 NCBP2LA6PVI3 153 aaKnown RBP11.46□□□□□ -0.57
TPM3-206ENST00000330188 IGLV2-11P01706 119 aa11.46□□□□□ -0.57
TPM3-206ENST00000330188 IL4P05112 153 aa11.46□□□□□ -0.57
TPM3-206ENST00000330188 IGLC2P0DOY2 106 aa11.46□□□□□ -0.57
TPM3-206ENST00000330188 CT83Q5H943 113 aa11.46□□□□□ -0.57
TPM3-206ENST00000330188 TCF24Q7RTU0 167 aa11.46□□□□□ -0.57
TPM3-206ENST00000330188 ATP5L2Q7Z4Y8 100 aa11.46□□□□□ -0.57
TPM3-206ENST00000330188 TTC9CQ8N5M4 171 aa11.46□□□□□ -0.57
TPM3-206ENST00000330188 C17orf77Q96MU5 243 aa11.46□□□□□ -0.57
TPM3-206ENST00000330188 UBTD1Q9HAC8 227 aa11.46□□□□□ -0.57
TPM3-206ENST00000330188 KIR2DL5BA0A0G2JN68 375 aa11.45□□□□□ -0.58
TPM3-206ENST00000330188 KIR2DL5BA0A0G2JPC4 375 aa11.45□□□□□ -0.58
TPM3-206ENST00000330188 A0A1B0GXF2 115 aa11.45□□□□□ -0.58
TPM3-206ENST00000330188 A0A1W2PS18 150 aa11.45□□□□□ -0.58
TPM3-206ENST00000330188 ZNF705FA8MVS1 300 aaPredicted RBP11.45□□□□□ -0.58
TPM3-206ENST00000330188 MRPS12O15235 138 aaKnown RBP11.45□□□□□ -0.58
TPM3-206ENST00000330188 ZNF705DP0CH99 300 aaPredicted RBP11.45□□□□□ -0.58
TPM3-206ENST00000330188 ZNF705BP0CI00 300 aaPredicted RBP11.45□□□□□ -0.58
TPM3-206ENST00000330188 C1orf194Q5T5A4 169 aa11.45□□□□□ -0.58
TPM3-206ENST00000330188 GOLT1AQ6ZVE7 132 aa11.45□□□□□ -0.58
TPM3-206ENST00000330188 KIR2DL5AQ8N109 375 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms