RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 SSUH2Q9Y2M2 353 aa13.94□□□□□ -0.18
PTP4A3-201ENST00000329397 TRAV8-1A0A0A6YYK1 113 aa13.94□□□□□ -0.18
PTP4A3-201ENST00000329397 EBLN2Q6P2I7 272 aa13.94□□□□□ -0.18
PTP4A3-201ENST00000329397 PDPNQ86YL7 162 aa13.94□□□□□ -0.18
PTP4A3-201ENST00000329397 A0A0G2JNJ9 132 aa13.93□□□□□ -0.18
PTP4A3-201ENST00000329397 IGLC2P0DOY2 106 aa13.93□□□□□ -0.18
PTP4A3-201ENST00000329397 IGLC3P0DOY3 106 aa13.93□□□□□ -0.18
PTP4A3-201ENST00000329397 Q6ZS92 163 aa13.93□□□□□ -0.18
PTP4A3-201ENST00000329397 SPATA12Q7Z6I5 190 aa13.93□□□□□ -0.18
PTP4A3-201ENST00000329397 STXBP6Q8NFX7 210 aa13.93□□□□□ -0.18
PTP4A3-201ENST00000329397 OR1L4Q8NGR5 311 aa13.93□□□□□ -0.18
PTP4A3-201ENST00000329397 IGFBPL1Q8WX77 278 aa13.93□□□□□ -0.18
PTP4A3-201ENST00000329397 Q9UFV3 132 aa13.93□□□□□ -0.18
PTP4A3-201ENST00000329397 WASHC3Q9Y3C0 194 aa13.93□□□□□ -0.18
PTP4A3-201ENST00000329397 LOC105371242A0A075B767 164 aa13.93□□□□□ -0.18
PTP4A3-201ENST00000329397 M0R2Z0 102 aa13.93□□□□□ -0.18
PTP4A3-201ENST00000329397 ZNF137PP52743 207 aa13.93□□□□□ -0.18
PTP4A3-201ENST00000329397 SCGB2A2Q13296 93 aa13.93□□□□□ -0.18
PTP4A3-201ENST00000329397 MRGPRG-AS1Q2M3A8 158 aa13.93□□□□□ -0.18
PTP4A3-201ENST00000329397 TMEM178BH3BS89 294 aa13.92□□□□□ -0.18
PTP4A3-201ENST00000329397 CACNA1BQ00975 2339 aa13.92□□□□□ -0.18
PTP4A3-201ENST00000329397 NDUFB3O43676 98 aa13.92□□□□□ -0.18
PTP4A3-201ENST00000329397 MC5RP33032 325 aa13.92□□□□□ -0.18
PTP4A3-201ENST00000329397 GRAMD2BQ96HH9 432 aa13.92□□□□□ -0.18
PTP4A3-201ENST00000329397 C7orf69Q9H7B7 122 aa13.92□□□□□ -0.18
PTP4A3-201ENST00000329397 EPDR1Q9UM22 224 aa13.92□□□□□ -0.18
PTP4A3-201ENST00000329397 THBDP07204 575 aa13.91□□□□□ -0.18
PTP4A3-201ENST00000329397 LOXP28300 417 aaPredicted RBP13.91□□□□□ -0.18
PTP4A3-201ENST00000329397 ST6GALNAC6Q969X2 333 aa13.91□□□□□ -0.18
PTP4A3-201ENST00000329397 IGLC7A0M8Q6 106 aa13.91□□□□□ -0.18
PTP4A3-201ENST00000329397 LYNX1G3V0Z9 82 aa13.91□□□□□ -0.18
PTP4A3-201ENST00000329397 LYNX1P0DP58 116 aa13.91□□□□□ -0.18
PTP4A3-201ENST00000329397 HNRNPA3P51991 378 aaKnown RBP13.91□□□□□ -0.18
PTP4A3-201ENST00000329397 PGLYRP4Q96LB8 373 aa13.91□□□□□ -0.18
PTP4A3-201ENST00000329397 ZNF48Q96MX3 618 aaPredicted RBP13.91□□□□□ -0.18
PTP4A3-201ENST00000329397 HINT1P49773 126 aaPredicted RBP13.9□□□□□ -0.18
PTP4A3-201ENST00000329397 ATP5IP56385 69 aaPredicted RBP13.9□□□□□ -0.18
PTP4A3-201ENST00000329397 MEF2CQ06413 473 aaPredicted RBP13.9□□□□□ -0.18
PTP4A3-201ENST00000329397 VSTM2AQ8TAG5 236 aa13.9□□□□□ -0.18
PTP4A3-201ENST00000329397 WNK2Q9Y3S1 2297 aa13.9□□□□□ -0.18
PTP4A3-201ENST00000329397 FAM181BA6NEQ2 426 aa13.9□□□□□ -0.18
PTP4A3-201ENST00000329397 C16orf97H3BN30 126 aa13.9□□□□□ -0.18
PTP4A3-201ENST00000329397 SUB1P53999 127 aaKnown RBP eCLIP13.9□□□□□ -0.18
PTP4A3-201ENST00000329397 COX19Q49B96 90 aa13.9□□□□□ -0.18
PTP4A3-201ENST00000329397 LRRC10Q5BKY1 277 aa13.9□□□□□ -0.18
PTP4A3-201ENST00000329397 LINC00173Q6ZV60 143 aa13.9□□□□□ -0.18
PTP4A3-201ENST00000329397 PRSS33Q8NF86 280 aa13.9□□□□□ -0.18
PTP4A3-201ENST00000329397 URB1-AS1Q96HZ7 61 aa13.9□□□□□ -0.18
PTP4A3-201ENST00000329397 KLK10O43240 276 aa13.89□□□□□ -0.19
PTP4A3-201ENST00000329397 MYCNOSP40205 109 aa13.89□□□□□ -0.19
PTP4A3-201ENST00000329397 THAP8Q8NA92 274 aa13.89□□□□□ -0.19
PTP4A3-201ENST00000329397 NUP37Q8NFH4 326 aa13.89□□□□□ -0.19
PTP4A3-201ENST00000329397 FAM57AQ8TBR7 257 aa13.89□□□□□ -0.19
PTP4A3-201ENST00000329397 GTSF1Q8WW33 167 aa13.89□□□□□ -0.19
PTP4A3-201ENST00000329397 MCRIP2Q9BUT9 160 aaKnown RBP13.89□□□□□ -0.19
PTP4A3-201ENST00000329397 UQCR10Q9UDW1 63 aa13.89□□□□□ -0.19
PTP4A3-201ENST00000329397 ZNF835Q9Y2P0 537 aa13.89□□□□□ -0.19
PTP4A3-201ENST00000329397 TIMM8BQ9Y5J9 83 aaPredicted RBP13.89□□□□□ -0.19
PTP4A3-201ENST00000329397 C3orf36Q3SXR2 165 aa13.89□□□□□ -0.19
PTP4A3-201ENST00000329397 LOC102724200A0A096LPH7 203 aaPredicted RBP13.88□□□□□ -0.19
PTP4A3-201ENST00000329397 HIST1H1EP10412 219 aaKnown RBP13.88□□□□□ -0.19
PTP4A3-201ENST00000329397 ZNF138P52744 262 aa13.88□□□□□ -0.19
PTP4A3-201ENST00000329397 VMA21Q3ZAQ7 101 aa13.88□□□□□ -0.19
PTP4A3-201ENST00000329397 FAM231DQ6ZW35 169 aa13.88□□□□□ -0.19
PTP4A3-201ENST00000329397 TMEM186Q96B77 213 aa13.88□□□□□ -0.19
PTP4A3-201ENST00000329397 OR8B2Q96RD0 313 aa13.88□□□□□ -0.19
PTP4A3-201ENST00000329397 COL5A1-AS1Q5SY13 56 aa13.88□□□□□ -0.19
PTP4A3-201ENST00000329397 IGFL3Q6UXB1 125 aa13.88□□□□□ -0.19
PTP4A3-201ENST00000329397 LAMTOR2Q9Y2Q5 125 aa13.88□□□□□ -0.19
PTP4A3-201ENST00000329397 NDUFB8O95169 186 aa13.88□□□□□ -0.19
PTP4A3-201ENST00000329397 PF4V1P10720 104 aa13.88□□□□□ -0.19
PTP4A3-201ENST00000329397 LYZP61626 148 aa13.88□□□□□ -0.19
PTP4A3-201ENST00000329397 TMEM30BQ3MIR4 351 aa13.88□□□□□ -0.19
PTP4A3-201ENST00000329397 SSX8Q7RTT4 187 aa13.88□□□□□ -0.19
PTP4A3-201ENST00000329397 EXOC3-AS1Q8N2X6 119 aa13.88□□□□□ -0.19
PTP4A3-201ENST00000329397 CIARTQ8N365 385 aaPredicted RBP13.88□□□□□ -0.19
PTP4A3-201ENST00000329397 PERPQ96FX8 193 aa13.88□□□□□ -0.19
PTP4A3-201ENST00000329397 B9A039 149 aa13.87□□□□□ -0.19
PTP4A3-201ENST00000329397 IGHV1-8P0DP01 117 aa13.87□□□□□ -0.19
PTP4A3-201ENST00000329397 WIPF2Q8TF74 440 aaPredicted RBP13.87□□□□□ -0.19
PTP4A3-201ENST00000329397 ZNF479Q96JC4 524 aa13.87□□□□□ -0.19
PTP4A3-201ENST00000329397 Q9H3A6 140 aa13.87□□□□□ -0.19
PTP4A3-201ENST00000329397 DYNLRB1Q9NP97 96 aa13.87□□□□□ -0.19
PTP4A3-201ENST00000329397 H0Y8G0 127 aa13.86□□□□□ -0.19
PTP4A3-201ENST00000329397 IGLL1P15814 213 aa13.86□□□□□ -0.19
PTP4A3-201ENST00000329397 COX7A1P24310 79 aa13.86□□□□□ -0.19
PTP4A3-201ENST00000329397 RPL27AP46776 148 aaKnown RBP13.86□□□□□ -0.19
PTP4A3-201ENST00000329397 GPR82Q96P67 336 aa13.86□□□□□ -0.19
PTP4A3-201ENST00000329397 MRPL27Q9P0M9 148 aaKnown RBP13.86□□□□□ -0.19
PTP4A3-201ENST00000329397 S4R3C0 116 aa13.86□□□□□ -0.19
PTP4A3-201ENST00000329397 ANKHD1Q8IWZ3 2542 aaKnown RBP13.86□□□□□ -0.19
PTP4A3-201ENST00000329397 DLX6P56179 175 aa13.86□□□□□ -0.19
PTP4A3-201ENST00000329397 ERASQ7Z444 233 aa13.86□□□□□ -0.19
PTP4A3-201ENST00000329397 RPP21Q9H633 154 aaKnown RBP13.86□□□□□ -0.19
PTP4A3-201ENST00000329397 C2orf70A6NJV1 201 aa13.85□□□□□ -0.19
PTP4A3-201ENST00000329397 INS-IGF2F8WCM5 200 aa13.85□□□□□ -0.19
PTP4A3-201ENST00000329397 GP9P14770 177 aa13.85□□□□□ -0.19
PTP4A3-201ENST00000329397 UNQ5815/PRO19632Q6UWF5 114 aa13.85□□□□□ -0.19
PTP4A3-201ENST00000329397 RNASE6Q93091 150 aaKnown RBP13.85□□□□□ -0.19
PTP4A3-201ENST00000329397 FBXL15Q9H469 300 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms