RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 ROS1P08922 2347 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 IGLV10-54A0A075B6I4 117 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 A0A1W2PQL4 384 aaPredicted RBP0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 LINC00862A6NCI5 91 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 METTL15A6NJ78 407 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 FFAR1O14842 300 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 SIVA1O15304 175 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 SLC25A16P16260 332 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 GPX2P18283 190 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 GADD45AP24522 165 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 LCN1P31025 176 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 ZNF140P52738 457 aaPredicted RBP0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 RAB8AP61006 207 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 SKP1P63208 163 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 PSG4Q00888 419 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 GLO1Q04760 184 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 KLRD1Q13241 179 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 ZNF181Q2M3W8 571 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 CCDC58Q4VC31 144 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 C9orf64Q5T6V5 341 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 OR10K2Q6IF99 312 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 LINC00471Q8N535 108 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 OR4C16Q8NGL9 310 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 RAD51AP1Q96B01 352 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 CMTM5Q96DZ9 223 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 ATP6V1G3Q96LB4 118 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 AMELXQ99217 191 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 MIEN1Q9BRT3 115 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 DOHHQ9BU89 302 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 TMEM109Q9BVC6 243 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 PARVBQ9HBI1 364 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 TMEM38BQ9NVV0 291 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 KLF13Q9Y2Y9 288 aaPredicted RBP0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 FAM215AQ9Y5M1 114 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 V9GYY5 206 aaPredicted RBP0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 TMED7-TICAM2A0A0A6YYA0 188 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 IGKV1-6A0A0C4DH72 117 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 A0A1B0GV50 99 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 TMEM235A6NFC5 223 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 SDHAF1A6NFY7 115 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 TVP23AA6NH52 213 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 KCNK1O00180 336 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 ZNF73O43830 326 aaPredicted RBP0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 CREBL2O60519 120 aaPredicted RBP0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 ZNF189O75820 626 aaPredicted RBP0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 IFNA10P01566 189 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 SHBGP04278 402 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 CRYBA1P05813 215 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 PPP1CCP36873 323 aaKnown RBP0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 REG1BP48304 166 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 CEBPGP53567 150 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 H2BFSP57053 126 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 RPS24P62847 133 aaKnown RBP0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 ERHP84090 104 aaKnown RBP0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 AKR1C1Q04828 323 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 PRDX1Q06830 199 aaKnown RBP0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 DHRS2Q13268 280 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 APOFQ13790 326 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 CDK10Q15131 360 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 DNAL1Q4LDG9 190 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 CD200R1LQ6Q8B3 271 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 ZNF826PQ6ZT77 177 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 C10orf67Q8IYJ2 551 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 LRRC25Q8N386 305 aaPredicted RBP0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 C9orf62Q8N4C0 152 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 CCDC112Q8NEF3 446 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 OR5D18Q8NGL1 313 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 SLC7A6Q92536 515 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 C2orf50Q96LR7 162 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 C20orf166-AS1Q96NR2 134 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 DHRS9Q9BPW9 319 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 TXNDC17Q9BRA2 123 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 TMEM208Q9BTX3 173 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 PARD6GQ9BYG4 376 aaPredicted RBP0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 TAAR3PQ9P1P4 343 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 NXT1Q9UKK6 140 aaKnown RBP0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 SNX12Q9UMY4 172 aa0.52□□□□□ -2.33
CCDC144A-201ENST00000328495 IGKV2-40A0A087WW87 121 aaPredicted RBP0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 TRAV8-1A0A0A6YYK1 113 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 BORCS7-ASMTA0A0B4J1R7 106 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 A0A1B0GW15 77 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 DAPL1A0PJW8 107 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 FUOMA2VDF0 154 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 C7orf71A4D174 169 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 OR4C45A6NMZ5 311 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 H3BP45 60 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 J3QRK9 145 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 M0QYV0 167 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 LAMA5O15230 3695 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 KLRC4O43908 158 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 TNFSF15O95150 251 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 TNFAIP8O95379 198 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 IGKV1-39P01597 117 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 IGKV2D-40P01614 121 aaPredicted RBP0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 IGKV1D-39P04432 117 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 CRYGSP22914 178 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 PSMB8P28062 276 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 HSD11B1P28845 292 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 CCR7P32248 378 aa0.51□□□□□ -2.33
CCDC144A-201ENST00000328495 MAGEA12P43365 314 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms