RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 GAR1Q9NY12 217 aaKnown RBP11.7□□□□□ -0.54
PRPF3-201ENST00000324862 GGCTO75223 188 aaKnown RBP11.7□□□□□ -0.54
PRPF3-201ENST00000324862 HOXD3P31249 432 aaPredicted RBP11.7□□□□□ -0.54
PRPF3-201ENST00000324862 FOXL1Q12952 345 aa11.7□□□□□ -0.54
PRPF3-201ENST00000324862 SCRT1Q9BWW7 348 aa11.7□□□□□ -0.54
PRPF3-201ENST00000324862 STAB1Q9NY15 2570 aa11.7□□□□□ -0.54
PRPF3-201ENST00000324862 UMAD1C9J7I0 102 aa11.69□□□□□ -0.54
PRPF3-201ENST00000324862 HYPMO75409 117 aa11.69□□□□□ -0.54
PRPF3-201ENST00000324862 RPEL1Q2QD12 228 aa11.69□□□□□ -0.54
PRPF3-201ENST00000324862 PXDC1Q5TGL8 231 aa11.69□□□□□ -0.54
PRPF3-201ENST00000324862 C10orf113Q5VZT2 155 aa11.69□□□□□ -0.54
PRPF3-201ENST00000324862 SFT2D1Q8WV19 159 aa11.69□□□□□ -0.54
PRPF3-201ENST00000324862 RAX2Q96IS3 184 aa11.69□□□□□ -0.54
PRPF3-201ENST00000324862 HRH4Q9H3N8 390 aa11.69□□□□□ -0.54
PRPF3-201ENST00000324862 KCNIP2Q9NS61 270 aa11.69□□□□□ -0.54
PRPF3-201ENST00000324862 TSSC4Q9Y5U2 329 aaPredicted RBP11.69□□□□□ -0.54
PRPF3-201ENST00000324862 CDC34P49427 236 aaPredicted RBP11.69□□□□□ -0.54
PRPF3-201ENST00000324862 SYNJ2BPP57105 145 aa11.69□□□□□ -0.54
PRPF3-201ENST00000324862 CCL20P78556 96 aa11.69□□□□□ -0.54
PRPF3-201ENST00000324862 RELQ04864 619 aaPredicted RBP11.69□□□□□ -0.54
PRPF3-201ENST00000324862 TM4SF20Q53R12 229 aa11.69□□□□□ -0.54
PRPF3-201ENST00000324862 TMPRSS5Q9H3S3 457 aa11.69□□□□□ -0.54
PRPF3-201ENST00000324862 MRPL27Q9P0M9 148 aaKnown RBP11.69□□□□□ -0.54
PRPF3-201ENST00000324862 PLP1P60201 277 aa11.68□□□□□ -0.54
PRPF3-201ENST00000324862 OR1N2Q8NGR9 330 aa11.68□□□□□ -0.54
PRPF3-201ENST00000324862 HSPB1P04792 205 aaKnown RBP11.68□□□□□ -0.54
PRPF3-201ENST00000324862 FAM209BQ5JX69 171 aa11.68□□□□□ -0.54
PRPF3-201ENST00000324862 ATP6V0BQ99437 205 aa11.68□□□□□ -0.54
PRPF3-201ENST00000324862 SLC25A39Q9BZJ4 359 aaPredicted RBP11.68□□□□□ -0.54
PRPF3-201ENST00000324862 HIGD1AQ9Y241 93 aa11.68□□□□□ -0.54
PRPF3-201ENST00000324862 A0A1W2PPV4 95 aa11.67□□□□□ -0.54
PRPF3-201ENST00000324862 MBP02144 154 aa11.67□□□□□ -0.54
PRPF3-201ENST00000324862 FABP1P07148 127 aa11.67□□□□□ -0.54
PRPF3-201ENST00000324862 H2AFB1P0C5Y9 115 aa11.67□□□□□ -0.54
PRPF3-201ENST00000324862 GATAD1Q8WUU5 269 aa11.67□□□□□ -0.54
PRPF3-201ENST00000324862 FUT9Q9Y231 359 aa11.67□□□□□ -0.54
PRPF3-201ENST00000324862 SCGB2A1O75556 95 aa11.67□□□□□ -0.54
PRPF3-201ENST00000324862 LURAP1LQ8IV03 231 aa11.67□□□□□ -0.54
PRPF3-201ENST00000324862 ZNF503Q96F45 646 aa11.67□□□□□ -0.54
PRPF3-201ENST00000324862 ACTR3CQ9C0K3 210 aaPredicted RBP11.67□□□□□ -0.54
PRPF3-201ENST00000324862 A0A1B0GUS0 222 aa11.66□□□□□ -0.54
PRPF3-201ENST00000324862 MAP1LC3B2A6NCE7 125 aa11.66□□□□□ -0.54
PRPF3-201ENST00000324862 SEC14L6B5MCN3 397 aa11.66□□□□□ -0.54
PRPF3-201ENST00000324862 LINC01619G3V211 115 aa11.66□□□□□ -0.54
PRPF3-201ENST00000324862 NDUFA4O00483 81 aa11.66□□□□□ -0.54
PRPF3-201ENST00000324862 OR10J4P0C629 311 aa11.66□□□□□ -0.54
PRPF3-201ENST00000324862 PYYP10082 97 aa11.66□□□□□ -0.54
PRPF3-201ENST00000324862 RAB5CP51148 216 aa11.66□□□□□ -0.54
PRPF3-201ENST00000324862 IQCF2Q8IXL9 164 aa11.66□□□□□ -0.54
PRPF3-201ENST00000324862 TMEM190Q8WZ59 177 aa11.66□□□□□ -0.54
PRPF3-201ENST00000324862 DLX4Q92988 240 aaPredicted RBP11.66□□□□□ -0.54
PRPF3-201ENST00000324862 FAM167A-AS1Q96KT0 104 aa11.66□□□□□ -0.54
PRPF3-201ENST00000324862 SLC25A2Q9BXI2 301 aa11.66□□□□□ -0.54
PRPF3-201ENST00000324862 MAP1LC3BQ9GZQ8 125 aa11.66□□□□□ -0.54
PRPF3-201ENST00000324862 H3BTX0 84 aa11.66□□□□□ -0.54
PRPF3-201ENST00000324862 ARL14EPLP0DKL9 152 aa11.66□□□□□ -0.54
PRPF3-201ENST00000324862 RHOBP62745 196 aa11.66□□□□□ -0.54
PRPF3-201ENST00000324862 OR1L4Q8NGR5 311 aa11.66□□□□□ -0.54
PRPF3-201ENST00000324862 DPF1Q92782 380 aa11.66□□□□□ -0.54
PRPF3-201ENST00000324862 PFDN5Q99471 154 aa11.66□□□□□ -0.54
PRPF3-201ENST00000324862 ELOA3CA0A087WX78 387 aaPredicted RBP11.65□□□□□ -0.54
PRPF3-201ENST00000324862 CTXND1A0A1B0GTU2 59 aa11.65□□□□□ -0.54
PRPF3-201ENST00000324862 CCL24O00175 119 aa11.65□□□□□ -0.54
PRPF3-201ENST00000324862 RABAC1Q9UI14 185 aa11.65□□□□□ -0.54
PRPF3-201ENST00000324862 ZNF98A6NK75 572 aa11.65□□□□□ -0.55
PRPF3-201ENST00000324862 RAB14P61106 215 aa11.65□□□□□ -0.55
PRPF3-201ENST00000324862 CLLU1Q5K131 121 aa11.65□□□□□ -0.55
PRPF3-201ENST00000324862 GPHB5Q86YW7 130 aa11.65□□□□□ -0.55
PRPF3-201ENST00000324862 H3BRN7 92 aa11.64□□□□□ -0.55
PRPF3-201ENST00000324862 OR7C2O60412 319 aa11.64□□□□□ -0.55
PRPF3-201ENST00000324862 STAG3L2P0CL84 134 aa11.64□□□□□ -0.55
PRPF3-201ENST00000324862 STAG3L3P0CL85 134 aa11.64□□□□□ -0.55
PRPF3-201ENST00000324862 PRB4P10163 310 aaPredicted RBP11.64□□□□□ -0.55
PRPF3-201ENST00000324862 KLF5Q13887 457 aaPredicted RBP11.64□□□□□ -0.55
PRPF3-201ENST00000324862 SPATA3Q8NHX4 192 aa11.64□□□□□ -0.55
PRPF3-201ENST00000324862 CITED1Q99966 193 aa11.64□□□□□ -0.55
PRPF3-201ENST00000324862 SHANK2-AS3Q9BTD1 123 aa11.64□□□□□ -0.55
PRPF3-201ENST00000324862 TMEM213A2RRL7 107 aa11.64□□□□□ -0.55
PRPF3-201ENST00000324862 FAM106AQ4KMX7 169 aa11.64□□□□□ -0.55
PRPF3-201ENST00000324862 SAT2Q96F10 170 aaPredicted RBP11.64□□□□□ -0.55
PRPF3-201ENST00000324862 C8orf88P0DMB2 117 aa11.63□□□□□ -0.55
PRPF3-201ENST00000324862 NPPCP23582 126 aa11.63□□□□□ -0.55
PRPF3-201ENST00000324862 FHL3Q13643 280 aa11.63□□□□□ -0.55
PRPF3-201ENST00000324862 DPPA3Q6W0C5 159 aa11.63□□□□□ -0.55
PRPF3-201ENST00000324862 MBD3L1Q8WWY6 194 aa11.63□□□□□ -0.55
PRPF3-201ENST00000324862 METTL26Q96S19 204 aa11.63□□□□□ -0.55
PRPF3-201ENST00000324862 BUB3O43684 328 aa11.62□□□□□ -0.55
PRPF3-201ENST00000324862 CRYBB3P26998 211 aa11.62□□□□□ -0.55
PRPF3-201ENST00000324862 BLOC1S1P78537 153 aa11.62□□□□□ -0.55
PRPF3-201ENST00000324862 C17orf77Q96MU5 243 aa11.62□□□□□ -0.55
PRPF3-201ENST00000324862 DAZ1Q9NQZ3 744 aaKnown RBP11.62□□□□□ -0.55
PRPF3-201ENST00000324862 ZP3P21754 424 aa11.61□□□□□ -0.55
PRPF3-201ENST00000324862 ADAMTSL5Q6ZMM2 481 aa11.61□□□□□ -0.55
PRPF3-201ENST00000324862 NDUFA11Q86Y39 141 aa11.61□□□□□ -0.55
PRPF3-201ENST00000324862 SLC7A5P1Q8MH63 180 aa11.61□□□□□ -0.55
PRPF3-201ENST00000324862 LYPD6BQ8NI32 183 aa11.61□□□□□ -0.55
PRPF3-201ENST00000324862 MRPL32Q9BYC8 188 aaKnown RBP11.61□□□□□ -0.55
PRPF3-201ENST00000324862 TECRQ9NZ01 308 aaKnown RBP11.61□□□□□ -0.55
PRPF3-201ENST00000324862 H3BQ15 152 aa11.61□□□□□ -0.55
PRPF3-201ENST00000324862 UBE2G2P60604 165 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms