RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 MRPL16Q9NX20 251 aaKnown RBP7.63□□□□□ -1.19
CAPN3-201ENST00000318023 OR2W1Q9Y3N9 320 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 KBTBD11-OT1A0A1B0GTJ5 212 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 A0A1B0GW15 77 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 C9JCJ5 164 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 DNPH1O43598 174 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 CXorf1O96002 111 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 CD40P25942 277 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 ZNF816Q0VGE8 651 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-201ENST00000318023 SLC25A47Q6Q0C1 308 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 FA2HQ7L5A8 372 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 SMIM20Q8N5G0 67 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 LRRC29Q8WV35 223 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 C18orf15Q96N68 181 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 GCM1Q9NP62 436 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 SPANXB1Q9NS25 103 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-201ENST00000318023 ZNF355PQ9NSJ1 428 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 SLC25A15Q9Y619 301 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 VWC2LB2RUY7 222 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 B5MCH6 92 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 K7ERJ3 54 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 CECR9P0C854 216 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 STAG3L2P0CL84 134 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 GCHFRP30047 84 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 TMEM249Q2WGJ8 235 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 TIGITQ495A1 244 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 TIMM23BQ5SRD1 257 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 C1QTNF5Q9BXJ0 243 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 NGBQ9NPG2 151 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 HIF1ANQ9NWT6 349 aa7.62□□□□□ -1.19
CAPN3-201ENST00000318023 F11RQ9Y624 299 aaKnown RBP7.62□□□□□ -1.19
CAPN3-201ENST00000318023 TANC2Q9HCD6 1990 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 TRGV10A0A0A0MS01 117 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 IZUMO1RA6ND01 250 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 K7EMI3 77 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 DHHO43323 396 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 IGLV2-14P01704 120 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 CLEC3BP05452 202 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 BCL3P20749 454 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 COX19Q49B96 90 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 LHFPL2Q6ZUX7 228 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 BOD1L2Q8IYS8 172 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 MS4A5Q9H3V2 200 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 SMIM27A0A1W2PRY6 76 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 TMEM189A5PLL7 270 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 J3QR89 54 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 ACTL6BO94805 426 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 ATP5J2P56134 94 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 PDLIM3Q53GG5 364 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-201ENST00000318023 TRAT1Q6PIZ9 186 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 Q6ZR03 302 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 C10orf35Q96D05 121 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 C20orf78Q9BR46 151 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 MAP1LC3CQ9BXW4 147 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 ZNF391Q9UJN7 358 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 LSM4Q9Y4Z0 139 aaKnown RBP7.61□□□□□ -1.19
CAPN3-201ENST00000318023 ATRQ13535 2644 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 IGHV1-18A0A0C4DH31 117 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 KIR2DS1A0A191URI9 304 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 KIR2DS4P43632 304 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 KIR2DS1Q14954 304 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 GJC3Q8NFK1 279 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 H1FXQ92522 213 aaKnown RBP7.61□□□□□ -1.19
CAPN3-201ENST00000318023 RAB1CQ92928 201 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 C5orf30Q96GV9 206 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 JPT1Q9UK76 154 aa7.61□□□□□ -1.19
CAPN3-201ENST00000318023 E7EQL1 145 aa7.6□□□□□ -1.19
CAPN3-201ENST00000318023 SIVA1O15304 175 aa7.6□□□□□ -1.19
CAPN3-201ENST00000318023 MS4A6AQ9H2W1 248 aa7.6□□□□□ -1.19
CAPN3-201ENST00000318023 OSTCQ9NRP0 149 aa7.6□□□□□ -1.19
CAPN3-201ENST00000318023 NCR2O95944 276 aa7.6□□□□□ -1.19
CAPN3-201ENST00000318023 SPINK8P0C7L1 97 aa7.6□□□□□ -1.19
CAPN3-201ENST00000318023 KLF5Q13887 457 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-201ENST00000318023 NPIPB13A6NJU9 1138 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 NPIPB4C9JG80 1138 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 LYNX1G3V0Z9 82 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 MT-ATP8P03928 68 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 CSN3P07498 182 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 LYNX1P0DP58 116 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 FGF6P10767 208 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 ZNF32P17041 273 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 REG1BP48304 166 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 FOXI2Q6ZQN5 318 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 NUP35Q8NFH5 326 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 MBD6Q96DN6 1003 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 LINC00479Q96M42 142 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 TXNDC17Q9BRA2 123 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 C5orf49A4QMS7 147 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 CHEK1O14757 476 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 CRYGCP07315 174 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 ANXA2RQ3ZCQ2 193 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 DDB2Q92466 427 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 C11orf52Q96A22 123 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 HSPB8Q9UJY1 196 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 WDR83OSQ9Y284 106 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 MPC1Q9Y5U8 109 aa7.59□□□□□ -1.19
CAPN3-201ENST00000318023 OR11H12B2RN74 326 aa7.59□□□□□ -1.2
CAPN3-201ENST00000318023 SHISA9B4DS77 424 aa7.59□□□□□ -1.2
CAPN3-201ENST00000318023 H3BMG7 143 aa7.59□□□□□ -1.2
CAPN3-201ENST00000318023 IGHV3-7P01780 117 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms