RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 TDRG1Q3Y452 100 aa16.31■□□□□ 0.2
TTC39C-202ENST00000317571 KLF17Q5JT82 389 aaPredicted RBP16.31■□□□□ 0.2
TTC39C-202ENST00000317571 TOMM20LQ6UXN7 152 aa16.31■□□□□ 0.2
TTC39C-202ENST00000317571 DTX2Q86UW9 622 aa16.31■□□□□ 0.2
TTC39C-202ENST00000317571 NUDT10Q8NFP7 164 aa16.31■□□□□ 0.2
TTC39C-202ENST00000317571 STXBP6Q8NFX7 210 aa16.31■□□□□ 0.2
TTC39C-202ENST00000317571 NUDT11Q96G61 164 aa16.31■□□□□ 0.2
TTC39C-202ENST00000317571 RPH3ALQ9UNE2 315 aa16.31■□□□□ 0.2
TTC39C-202ENST00000317571 M0R1W7 72 aa16.3■□□□□ 0.2
TTC39C-202ENST00000317571 NDUFA3O95167 84 aa16.3■□□□□ 0.2
TTC39C-202ENST00000317571 ZFP36P26651 326 aaKnown RBP16.3■□□□□ 0.2
TTC39C-202ENST00000317571 Q0VG73 95 aa16.3■□□□□ 0.2
TTC39C-202ENST00000317571 Q71RC1 249 aaPredicted RBP16.3■□□□□ 0.2
TTC39C-202ENST00000317571 NEU4Q8WWR8 484 aaPredicted RBP16.3■□□□□ 0.2
TTC39C-202ENST00000317571 PRR27Q6MZM9 219 aa16.3■□□□□ 0.2
TTC39C-202ENST00000317571 FAM231DQ6ZW35 169 aa16.3■□□□□ 0.2
TTC39C-202ENST00000317571 NAT8BQ9UHF3 227 aa16.3■□□□□ 0.2
TTC39C-202ENST00000317571 MED13LQ71F56 2210 aa16.3■□□□□ 0.2
TTC39C-202ENST00000317571 TRBV9A0A0B4J1U6 114 aa16.29■□□□□ 0.2
TTC39C-202ENST00000317571 LINC00322Q6ZN03 302 aaPredicted RBP16.29■□□□□ 0.2
TTC39C-202ENST00000317571 NPBQ8NG41 125 aa16.29■□□□□ 0.2
TTC39C-202ENST00000317571 GNB4Q9HAV0 340 aa16.29■□□□□ 0.2
TTC39C-202ENST00000317571 HIGD1AQ9Y241 93 aa16.29■□□□□ 0.2
TTC39C-202ENST00000317571 KLF12Q9Y4X4 402 aa16.29■□□□□ 0.2
TTC39C-202ENST00000317571 S4R3C0 116 aa16.29■□□□□ 0.2
TTC39C-202ENST00000317571 SLC25A39Q9BZJ4 359 aaPredicted RBP16.29■□□□□ 0.2
TTC39C-202ENST00000317571 NUTF2P61970 127 aaKnown RBP16.28■□□□□ 0.2
TTC39C-202ENST00000317571 NDPQ00604 133 aa16.28■□□□□ 0.2
TTC39C-202ENST00000317571 ATG101Q9BSB4 218 aa16.28■□□□□ 0.2
TTC39C-202ENST00000317571 Q9H3A6 140 aa16.28■□□□□ 0.2
TTC39C-202ENST00000317571 ZNF586Q9NXT0 402 aa16.28■□□□□ 0.2
TTC39C-202ENST00000317571 VWC2LB2RUY7 222 aa16.28■□□□□ 0.2
TTC39C-202ENST00000317571 VMO1Q7Z5L0 202 aa16.28■□□□□ 0.2
TTC39C-202ENST00000317571 SAMD10Q9BYL1 202 aa16.28■□□□□ 0.2
TTC39C-202ENST00000317571 MRPL27Q9P0M9 148 aaKnown RBP16.28■□□□□ 0.2
TTC39C-202ENST00000317571 IZUMO1RA6ND01 250 aa16.27■□□□□ 0.2
TTC39C-202ENST00000317571 A6NNC1 897 aa16.27■□□□□ 0.2
TTC39C-202ENST00000317571 ZNF124Q15973 351 aa16.27■□□□□ 0.2
TTC39C-202ENST00000317571 GDF5OSQ5U4N7 250 aa16.27■□□□□ 0.2
TTC39C-202ENST00000317571 TEX43Q6ZNM6 134 aa16.27■□□□□ 0.2
TTC39C-202ENST00000317571 RASL11BQ9BPW5 248 aa16.27■□□□□ 0.2
TTC39C-202ENST00000317571 SRSF8Q9BRL6 282 aaKnown RBP16.27■□□□□ 0.2
TTC39C-202ENST00000317571 MLST8Q9BVC4 326 aa16.27■□□□□ 0.2
TTC39C-202ENST00000317571 RNF114Q9Y508 228 aa16.27■□□□□ 0.2
TTC39C-202ENST00000317571 WNK2Q9Y3S1 2297 aa16.27■□□□□ 0.19
TTC39C-202ENST00000317571 BMPR1BO00238 502 aa16.27■□□□□ 0.19
TTC39C-202ENST00000317571 AMY1AP04745 511 aa16.27■□□□□ 0.19
TTC39C-202ENST00000317571 UBE2G1P62253 170 aa16.26■□□□□ 0.19
TTC39C-202ENST00000317571 HES1Q14469 280 aa16.26■□□□□ 0.19
TTC39C-202ENST00000317571 C5orf64Q2M2E5 130 aa16.26■□□□□ 0.19
TTC39C-202ENST00000317571 BCL6BQ8N143 479 aaPredicted RBP16.26■□□□□ 0.19
TTC39C-202ENST00000317571 TCRAP04437 139 aa16.26■□□□□ 0.19
TTC39C-202ENST00000317571 WDR73Q6P4I2 378 aa16.26■□□□□ 0.19
TTC39C-202ENST00000317571 C5orf17Q8NAS9 161 aa16.26■□□□□ 0.19
TTC39C-202ENST00000317571 NUP35Q8NFH5 326 aa16.26■□□□□ 0.19
TTC39C-202ENST00000317571 M0R143 59 aa16.25■□□□□ 0.19
TTC39C-202ENST00000317571 MT-ND6P03923 174 aa16.25■□□□□ 0.19
TTC39C-202ENST00000317571 PRB4P10163 310 aaPredicted RBP16.25■□□□□ 0.19
TTC39C-202ENST00000317571 HOXB4P17483 251 aaPredicted RBP16.25■□□□□ 0.19
TTC39C-202ENST00000317571 CEACAM3P40198 252 aa16.25■□□□□ 0.19
TTC39C-202ENST00000317571 SLAQ13239 276 aa16.25■□□□□ 0.19
TTC39C-202ENST00000317571 VN1R17PQ8TDU5 208 aa16.25■□□□□ 0.19
TTC39C-202ENST00000317571 RCHY1Q96PM5 261 aa16.25■□□□□ 0.19
TTC39C-202ENST00000317571 TCAPO15273 167 aa16.25■□□□□ 0.19
TTC39C-202ENST00000317571 EXOC3-AS1Q8N2X6 119 aa16.25■□□□□ 0.19
TTC39C-202ENST00000317571 GRAMD2BQ96HH9 432 aa16.25■□□□□ 0.19
TTC39C-202ENST00000317571 FANCD2OSQ96PS1 177 aa16.25■□□□□ 0.19
TTC39C-202ENST00000317571 FBXL7Q9UJT9 491 aa16.25■□□□□ 0.19
TTC39C-202ENST00000317571 TRAV8-1A0A0A6YYK1 113 aa16.24■□□□□ 0.19
TTC39C-202ENST00000317571 RAB4AP20338 218 aa16.24■□□□□ 0.19
TTC39C-202ENST00000317571 C17orf77Q96MU5 243 aa16.24■□□□□ 0.19
TTC39C-202ENST00000317571 GPR82Q96P67 336 aa16.24■□□□□ 0.19
TTC39C-202ENST00000317571 RBM14Q96PK6 669 aaKnown RBP16.24■□□□□ 0.19
TTC39C-202ENST00000317571 LTAP01374 205 aa16.24■□□□□ 0.19
TTC39C-202ENST00000317571 GPX1P07203 203 aa16.24■□□□□ 0.19
TTC39C-202ENST00000317571 GPR6P46095 362 aaPredicted RBP16.24■□□□□ 0.19
TTC39C-202ENST00000317571 UQCRFS1P47985 274 aa16.24■□□□□ 0.19
TTC39C-202ENST00000317571 RPL19P84098 196 aaKnown RBP16.24■□□□□ 0.19
TTC39C-202ENST00000317571 ZNF705AQ6ZN79 300 aaPredicted RBP16.24■□□□□ 0.19
TTC39C-202ENST00000317571 Q8N6K4 173 aa16.24■□□□□ 0.19
TTC39C-202ENST00000317571 NEU1Q99519 415 aa16.24■□□□□ 0.19
TTC39C-202ENST00000317571 TMEM14CQ9P0S9 112 aa16.24■□□□□ 0.19
TTC39C-202ENST00000317571 PAM16Q9Y3D7 125 aa16.24■□□□□ 0.19
TTC39C-202ENST00000317571 TOX4O94842 621 aa16.23■□□□□ 0.19
TTC39C-202ENST00000317571 TOMM40O96008 361 aa16.23■□□□□ 0.19
TTC39C-202ENST00000317571 BRS3P32247 399 aa16.23■□□□□ 0.19
TTC39C-202ENST00000317571 PRR31Q5SQ13 230 aa16.23■□□□□ 0.19
TTC39C-202ENST00000317571 SIGLECL1Q8N7X8 197 aa16.23■□□□□ 0.19
TTC39C-202ENST00000317571 ZNF491Q8N8L2 437 aa16.23■□□□□ 0.19
TTC39C-202ENST00000317571 F8W735 103 aaPredicted RBP16.23■□□□□ 0.19
TTC39C-202ENST00000317571 SRIP30626 198 aa16.23■□□□□ 0.19
TTC39C-202ENST00000317571 C20orf144Q9BQM9 153 aa16.23■□□□□ 0.19
TTC39C-202ENST00000317571 IGLV2-11P01706 119 aa16.22■□□□□ 0.19
TTC39C-202ENST00000317571 HLA-DQA1P01909 254 aa16.22■□□□□ 0.19
TTC39C-202ENST00000317571 SIRPDQ9H106 197 aa16.22■□□□□ 0.19
TTC39C-202ENST00000317571 IGLV11-55A0A075B6I3 123 aa16.21■□□□□ 0.19
TTC39C-202ENST00000317571 H3BRN7 92 aa16.21■□□□□ 0.19
TTC39C-202ENST00000317571 C19orf84I3L1E1 186 aa16.21■□□□□ 0.19
TTC39C-202ENST00000317571 OR10J3Q5JRS4 329 aa16.21■□□□□ 0.19
TTC39C-202ENST00000317571 KIR3DL3Q8N743 410 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms