RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 MEOX2P50222 304 aa12.86□□□□□ -0.35
TPM1-203ENST00000317516 AKR1C1Q04828 323 aa12.86□□□□□ -0.35
TPM1-203ENST00000317516 CNPY1Q3B7I2 92 aa12.86□□□□□ -0.35
TPM1-203ENST00000317516 FOXI2Q6ZQN5 318 aa12.86□□□□□ -0.35
TPM1-203ENST00000317516 WDR12Q9GZL7 423 aaKnown RBP12.86□□□□□ -0.35
TPM1-203ENST00000317516 LINC00854A0A1B0GVQ3 168 aa12.85□□□□□ -0.35
TPM1-203ENST00000317516 IGLL5B9A064 214 aa12.85□□□□□ -0.35
TPM1-203ENST00000317516 PRSS46E5RG02 174 aa12.85□□□□□ -0.35
TPM1-203ENST00000317516 ISLRO14498 428 aa12.85□□□□□ -0.35
TPM1-203ENST00000317516 ADAP1O75689 374 aa12.85□□□□□ -0.35
TPM1-203ENST00000317516 HLA-DMBP28068 263 aa12.85□□□□□ -0.35
TPM1-203ENST00000317516 C4orf46Q504U0 113 aa12.85□□□□□ -0.35
TPM1-203ENST00000317516 EBLN2Q6P2I7 272 aa12.85□□□□□ -0.35
TPM1-203ENST00000317516 CLUHP3Q96NS8 147 aa12.85□□□□□ -0.35
TPM1-203ENST00000317516 TMEM147Q9BVK8 224 aa12.85□□□□□ -0.35
TPM1-203ENST00000317516 SAV1Q9H4B6 383 aaPredicted RBP12.85□□□□□ -0.35
TPM1-203ENST00000317516 PSENENQ9NZ42 101 aa12.85□□□□□ -0.35
TPM1-203ENST00000317516 FLVCR2Q9UPI3 526 aa12.85□□□□□ -0.35
TPM1-203ENST00000317516 TRAV10A0A0B4J240 114 aa12.84□□□□□ -0.35
TPM1-203ENST00000317516 H3BP45 60 aa12.84□□□□□ -0.35
TPM1-203ENST00000317516 ORM2P19652 201 aa12.84□□□□□ -0.35
TPM1-203ENST00000317516 POLR2GP62487 172 aaKnown RBP eCLIP12.84□□□□□ -0.35
TPM1-203ENST00000317516 TMEM144Q7Z5S9 345 aa12.84□□□□□ -0.35
TPM1-203ENST00000317516 OR4D5Q8NGN0 318 aa12.84□□□□□ -0.35
TPM1-203ENST00000317516 GPR82Q96P67 336 aa12.84□□□□□ -0.35
TPM1-203ENST00000317516 ELOA3CA0A087WX78 387 aaPredicted RBP12.83□□□□□ -0.36
TPM1-203ENST00000317516 ZNF98A6NK75 572 aa12.83□□□□□ -0.36
TPM1-203ENST00000317516 SOCS3O14543 225 aa12.83□□□□□ -0.36
TPM1-203ENST00000317516 IGKV3-20P01619 116 aa12.83□□□□□ -0.36
TPM1-203ENST00000317516 ACOT7LQ6ZUV0 252 aa12.83□□□□□ -0.36
TPM1-203ENST00000317516 OR4B1Q8NGF8 309 aa12.83□□□□□ -0.36
TPM1-203ENST00000317516 OR1B1Q8NGR6 318 aa12.83□□□□□ -0.36
TPM1-203ENST00000317516 SMIM8Q96KF7 97 aa12.83□□□□□ -0.36
TPM1-203ENST00000317516 C16orf92Q96LL3 132 aa12.83□□□□□ -0.36
TPM1-203ENST00000317516 SLC25A22Q9H936 323 aa12.83□□□□□ -0.36
TPM1-203ENST00000317516 RPRMQ9NS64 109 aa12.83□□□□□ -0.36
TPM1-203ENST00000317516 NDUFA13Q9P0J0 144 aa12.83□□□□□ -0.36
TPM1-203ENST00000317516 AGRNO00468 2067 aa12.83□□□□□ -0.36
TPM1-203ENST00000317516 SMCO3A2RU48 225 aa12.82□□□□□ -0.36
TPM1-203ENST00000317516 SMIM9A6NGZ8 99 aa12.82□□□□□ -0.36
TPM1-203ENST00000317516 IL5P05113 134 aa12.82□□□□□ -0.36
TPM1-203ENST00000317516 GDF5OSQ5U4N7 250 aa12.82□□□□□ -0.36
TPM1-203ENST00000317516 S100A7AQ86SG5 101 aa12.82□□□□□ -0.36
TPM1-203ENST00000317516 NEU1Q99519 415 aa12.82□□□□□ -0.36
TPM1-203ENST00000317516 RSG1Q9BU20 258 aa12.82□□□□□ -0.36
TPM1-203ENST00000317516 TMEM189A5PLL7 270 aa12.81□□□□□ -0.36
TPM1-203ENST00000317516 SSSCA1O60232 199 aa12.81□□□□□ -0.36
TPM1-203ENST00000317516 IL7P13232 177 aa12.81□□□□□ -0.36
TPM1-203ENST00000317516 ANXA7P20073 488 aaKnown RBP12.81□□□□□ -0.36
TPM1-203ENST00000317516 GATA2P23769 480 aaPredicted RBP12.81□□□□□ -0.36
TPM1-203ENST00000317516 RAP2BP61225 183 aa12.81□□□□□ -0.36
TPM1-203ENST00000317516 PSG9Q00887 426 aa12.81□□□□□ -0.36
TPM1-203ENST00000317516 Q6ZTC4 211 aa12.81□□□□□ -0.36
TPM1-203ENST00000317516 SDHCQ99643 169 aaPredicted RBP12.81□□□□□ -0.36
TPM1-203ENST00000317516 PAX9P55771 341 aa12.8□□□□□ -0.36
TPM1-203ENST00000317516 SELENOTP62341 195 aa12.8□□□□□ -0.36
TPM1-203ENST00000317516 IAH1Q2TAA2 248 aaPredicted RBP12.8□□□□□ -0.36
TPM1-203ENST00000317516 ZNF705AQ6ZN79 300 aaPredicted RBP12.8□□□□□ -0.36
TPM1-203ENST00000317516 CYP2G1PQ6ZSU1 146 aa12.8□□□□□ -0.36
TPM1-203ENST00000317516 RPP25LQ8N5L8 163 aaKnown RBP12.8□□□□□ -0.36
TPM1-203ENST00000317516 OR10P1Q8NGE3 313 aa12.8□□□□□ -0.36
TPM1-203ENST00000317516 SLC25A32Q9H2D1 315 aa12.8□□□□□ -0.36
TPM1-203ENST00000317516 GSKIPQ9P0R6 139 aa12.8□□□□□ -0.36
TPM1-203ENST00000317516 APLNQ9ULZ1 77 aa12.8□□□□□ -0.36
TPM1-203ENST00000317516 ALMS1Q8TCU4 4167 aa12.8□□□□□ -0.36
TPM1-203ENST00000317516 PLECQ15149 4684 aaKnown RBP12.79□□□□□ -0.36
TPM1-203ENST00000317516 HYPMO75409 117 aa12.79□□□□□ -0.36
TPM1-203ENST00000317516 DEDDO75618 318 aa12.79□□□□□ -0.36
TPM1-203ENST00000317516 SCGB1D2O95969 90 aa12.79□□□□□ -0.36
TPM1-203ENST00000317516 SPART-AS1P0CW21 52 aa12.79□□□□□ -0.36
TPM1-203ENST00000317516 BTCP35070 178 aa12.79□□□□□ -0.36
TPM1-203ENST00000317516 FXYD7P58549 80 aa12.79□□□□□ -0.36
TPM1-203ENST00000317516 TAS2R30P59541 319 aa12.79□□□□□ -0.36
TPM1-203ENST00000317516 DEFB1P60022 68 aa12.79□□□□□ -0.36
TPM1-203ENST00000317516 DLK1P80370 383 aa12.79□□□□□ -0.36
TPM1-203ENST00000317516 FAM78BQ5VT40 261 aa12.79□□□□□ -0.36
TPM1-203ENST00000317516 TMEM182Q6ZP80 229 aaPredicted RBP12.79□□□□□ -0.36
TPM1-203ENST00000317516 MITD1Q8WV92 249 aa12.79□□□□□ -0.36
TPM1-203ENST00000317516 NPVFQ9HCQ7 196 aa12.79□□□□□ -0.36
TPM1-203ENST00000317516 RNF24Q9Y225 148 aa12.79□□□□□ -0.36
TPM1-203ENST00000317516 GOLT1BQ9Y3E0 138 aa12.79□□□□□ -0.36
TPM1-203ENST00000317516 IGHV3OR16-12A0A075B7B8 117 aa12.78□□□□□ -0.36
TPM1-203ENST00000317516 DEFB131BA0A096LNP1 70 aa12.78□□□□□ -0.36
TPM1-203ENST00000317516 A0A0J9YX75 114 aa12.78□□□□□ -0.36
TPM1-203ENST00000317516 ZNF705FA8MVS1 300 aaPredicted RBP12.78□□□□□ -0.36
TPM1-203ENST00000317516 FNDC10F2Z333 226 aa12.78□□□□□ -0.36
TPM1-203ENST00000317516 TSC22D2O75157 780 aa12.78□□□□□ -0.36
TPM1-203ENST00000317516 ZNF705DP0CH99 300 aaPredicted RBP12.78□□□□□ -0.36
TPM1-203ENST00000317516 ZNF705BP0CI00 300 aaPredicted RBP12.78□□□□□ -0.36
TPM1-203ENST00000317516 RPL7P18124 248 aaKnown RBP12.78□□□□□ -0.36
TPM1-203ENST00000317516 C12orf74Q32Q52 190 aa12.78□□□□□ -0.36
TPM1-203ENST00000317516 RNF126Q9BV68 326 aa12.78□□□□□ -0.36
TPM1-203ENST00000317516 SLC25A39Q9BZJ4 359 aaPredicted RBP12.78□□□□□ -0.36
TPM1-203ENST00000317516 DOK5Q9P104 306 aa12.78□□□□□ -0.36
TPM1-203ENST00000317516 MGAT4CQ9UBM8 478 aa12.78□□□□□ -0.36
TPM1-203ENST00000317516 HIGD1AQ9Y241 93 aa12.78□□□□□ -0.36
TPM1-203ENST00000317516 RFNGQ9Y644 331 aa12.78□□□□□ -0.36
TPM1-203ENST00000317516 PMS2P5A8MQ11 134 aa12.77□□□□□ -0.37
TPM1-203ENST00000317516 F6UB75 175 aa12.77□□□□□ -0.37
TPM1-203ENST00000317516 OR5G3P0C626 314 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms