RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 GFRA4Q9GZZ7 299 aa11.87□□□□□ -0.51
CHFR-202ENST00000315585 Q9H3A6 140 aa11.87□□□□□ -0.51
CHFR-202ENST00000315585 I3L2K1 104 aa11.86□□□□□ -0.51
CHFR-202ENST00000315585 NBR2O15453 112 aa11.86□□□□□ -0.51
CHFR-202ENST00000315585 TCRAP04437 139 aa11.86□□□□□ -0.51
CHFR-202ENST00000315585 PSG1P11464 419 aa11.86□□□□□ -0.51
CHFR-202ENST00000315585 AMTP48728 403 aa11.86□□□□□ -0.51
CHFR-202ENST00000315585 LINC00310P59036 64 aa11.86□□□□□ -0.51
CHFR-202ENST00000315585 PRR27Q6MZM9 219 aa11.86□□□□□ -0.51
CHFR-202ENST00000315585 CCDC144NLQ6NUI1 221 aa11.86□□□□□ -0.51
CHFR-202ENST00000315585 NUP35Q8NFH5 326 aa11.86□□□□□ -0.51
CHFR-202ENST00000315585 K7EQM0 130 aa11.86□□□□□ -0.51
CHFR-202ENST00000315585 SCGB2A1O75556 95 aa11.86□□□□□ -0.51
CHFR-202ENST00000315585 LTAP01374 205 aa11.86□□□□□ -0.51
CHFR-202ENST00000315585 P01737 135 aa11.86□□□□□ -0.51
CHFR-202ENST00000315585 GPR6P46095 362 aaPredicted RBP11.86□□□□□ -0.51
CHFR-202ENST00000315585 LYZP61626 148 aa11.86□□□□□ -0.51
CHFR-202ENST00000315585 ZNF600Q6ZNG1 722 aa11.86□□□□□ -0.51
CHFR-202ENST00000315585 LYPD1Q8N2G4 141 aa11.86□□□□□ -0.51
CHFR-202ENST00000315585 C20orf144Q9BQM9 153 aa11.86□□□□□ -0.51
CHFR-202ENST00000315585 MLST8Q9BVC4 326 aa11.86□□□□□ -0.51
CHFR-202ENST00000315585 SLC25A39Q9BZJ4 359 aaPredicted RBP11.86□□□□□ -0.51
CHFR-202ENST00000315585 RPP21Q9H633 154 aaKnown RBP11.86□□□□□ -0.51
CHFR-202ENST00000315585 HIGD1CA8MV81 97 aa11.85□□□□□ -0.51
CHFR-202ENST00000315585 M0QZK8 103 aa11.85□□□□□ -0.51
CHFR-202ENST00000315585 ZNF324O75467 553 aaPredicted RBP11.85□□□□□ -0.51
CHFR-202ENST00000315585 EFNA4P52798 201 aa11.85□□□□□ -0.51
CHFR-202ENST00000315585 BPIFA4PQ86YQ2 179 aa11.85□□□□□ -0.51
CHFR-202ENST00000315585 NPBQ8NG41 125 aa11.85□□□□□ -0.51
CHFR-202ENST00000315585 VAMP8Q9BV40 100 aa11.85□□□□□ -0.51
CHFR-202ENST00000315585 SSBP3Q9BWW4 388 aaPredicted RBP11.85□□□□□ -0.51
CHFR-202ENST00000315585 NBEAQ8NFP9 2946 aa11.85□□□□□ -0.51
CHFR-202ENST00000315585 OOSP1A8MZH6 123 aa11.85□□□□□ -0.51
CHFR-202ENST00000315585 C19orf84I3L1E1 186 aa11.85□□□□□ -0.51
CHFR-202ENST00000315585 TIMM23O14925 209 aa11.85□□□□□ -0.51
CHFR-202ENST00000315585 LY6HO94772 140 aa11.85□□□□□ -0.51
CHFR-202ENST00000315585 GNG5P63218 68 aa11.85□□□□□ -0.51
CHFR-202ENST00000315585 C1orf122Q6ZSJ8 110 aa11.85□□□□□ -0.51
CHFR-202ENST00000315585 OR4F17Q8NGA8 305 aa11.85□□□□□ -0.51
CHFR-202ENST00000315585 OR4B1Q8NGF8 309 aa11.85□□□□□ -0.51
CHFR-202ENST00000315585 BORCS7Q96B45 105 aa11.85□□□□□ -0.51
CHFR-202ENST00000315585 NEU1Q99519 415 aa11.85□□□□□ -0.51
CHFR-202ENST00000315585 C7orf69Q9H7B7 122 aa11.85□□□□□ -0.51
CHFR-202ENST00000315585 MALRD1Q5VYJ5 2156 aa11.84□□□□□ -0.51
CHFR-202ENST00000315585 LOC105371242A0A075B767 164 aa11.84□□□□□ -0.51
CHFR-202ENST00000315585 TRBV6-1A0A0K0K1D8 114 aa11.84□□□□□ -0.51
CHFR-202ENST00000315585 M0R143 59 aa11.84□□□□□ -0.51
CHFR-202ENST00000315585 OR2J3O76001 311 aa11.84□□□□□ -0.51
CHFR-202ENST00000315585 CA1P00915 261 aaPredicted RBP11.84□□□□□ -0.51
CHFR-202ENST00000315585 FRMD6-AS1P0C7T7 363 aa11.84□□□□□ -0.51
CHFR-202ENST00000315585 PRTN3P24158 256 aa11.84□□□□□ -0.51
CHFR-202ENST00000315585 S100A7P31151 101 aa11.84□□□□□ -0.51
CHFR-202ENST00000315585 KIAA1644Q3SXP7 199 aa11.84□□□□□ -0.51
CHFR-202ENST00000315585 CYB5R2Q6BCY4 276 aa11.84□□□□□ -0.51
CHFR-202ENST00000315585 FAM168AQ92567 244 aa11.84□□□□□ -0.51
CHFR-202ENST00000315585 TBL2Q9Y4P3 447 aaKnown RBP11.84□□□□□ -0.51
CHFR-202ENST00000315585 A0A1W2PPR1 153 aa11.84□□□□□ -0.51
CHFR-202ENST00000315585 A0A1W2PS18 150 aa11.84□□□□□ -0.51
CHFR-202ENST00000315585 APELAP0DMC3 54 aa11.84□□□□□ -0.51
CHFR-202ENST00000315585 CDKN1AP38936 164 aa11.84□□□□□ -0.51
CHFR-202ENST00000315585 KLF5Q13887 457 aaPredicted RBP11.84□□□□□ -0.51
CHFR-202ENST00000315585 PRSS22Q9GZN4 317 aa11.84□□□□□ -0.51
CHFR-202ENST00000315585 NRN1Q9NPD7 142 aa11.84□□□□□ -0.51
CHFR-202ENST00000315585 NDUFA3O95167 84 aa11.83□□□□□ -0.52
CHFR-202ENST00000315585 RAB4AP20338 218 aa11.83□□□□□ -0.52
CHFR-202ENST00000315585 HBBP68871 147 aa11.83□□□□□ -0.52
CHFR-202ENST00000315585 THYN1Q9P016 225 aa11.83□□□□□ -0.52
CHFR-202ENST00000315585 IGHV3-21A0A0B4J1V1 117 aa11.82□□□□□ -0.52
CHFR-202ENST00000315585 VN1R17PQ8TDU5 208 aa11.82□□□□□ -0.52
CHFR-202ENST00000315585 MIEN1Q9BRT3 115 aa11.82□□□□□ -0.52
CHFR-202ENST00000315585 RPH3ALQ9UNE2 315 aa11.82□□□□□ -0.52
CHFR-202ENST00000315585 NAV3Q8IVL0 2385 aa11.82□□□□□ -0.52
CHFR-202ENST00000315585 KRTDAPP60985 99 aa11.82□□□□□ -0.52
CHFR-202ENST00000315585 ARF6P62330 175 aa11.82□□□□□ -0.52
CHFR-202ENST00000315585 SHANK2-AS3Q9BTD1 123 aa11.82□□□□□ -0.52
CHFR-202ENST00000315585 FAM103A1Q9BTL3 118 aaKnown RBP11.82□□□□□ -0.52
CHFR-202ENST00000315585 ZFP30Q9Y2G7 519 aa11.82□□□□□ -0.52
CHFR-202ENST00000315585 DIRC3C9JPN6 131 aa11.81□□□□□ -0.52
CHFR-202ENST00000315585 HSBP1O75506 76 aa11.81□□□□□ -0.52
CHFR-202ENST00000315585 SLAQ13239 276 aa11.81□□□□□ -0.52
CHFR-202ENST00000315585 KIR3DL3Q8N743 410 aa11.81□□□□□ -0.52
CHFR-202ENST00000315585 C18orf32Q8TCD1 76 aa11.81□□□□□ -0.52
CHFR-202ENST00000315585 ZNF48Q96MX3 618 aaPredicted RBP11.81□□□□□ -0.52
CHFR-202ENST00000315585 HIVEP3Q5T1R4 2406 aa11.81□□□□□ -0.52
CHFR-202ENST00000315585 NBASA2RRP1 2371 aa11.81□□□□□ -0.52
CHFR-202ENST00000315585 C19orf71A6NCJ1 209 aa11.81□□□□□ -0.52
CHFR-202ENST00000315585 RBPMS2Q6ZRY4 209 aaKnown RBP11.81□□□□□ -0.52
CHFR-202ENST00000315585 PKD1L2Q7Z442 2459 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 A0A1B0GXF2 115 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 NPIPB5A8MRT5 1133 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 F2Z2F3 143 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 K7EIM0 57 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 IGKV1-17P01599 117 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 PMCHP20382 165 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 COL8A1P27658 744 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 MINOS1Q5TGZ0 78 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 DMRTA1Q5VZB9 504 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 ZNF562Q6V9R5 426 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 MINOS1-NBL1R4GNA1 71 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 ODF3BA8MYP8 253 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms