RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 MEIG1Q5JSS6 88 aa11.25□□□□□ -0.61
SPAST-201ENST00000315285 Q6ZS92 163 aa11.25□□□□□ -0.61
SPAST-201ENST00000315285 MLANAQ16655 118 aa11.25□□□□□ -0.61
SPAST-201ENST00000315285 GLMPQ8WWB7 406 aa11.25□□□□□ -0.61
SPAST-201ENST00000315285 SPCS1Q9Y6A9 102 aa11.25□□□□□ -0.61
SPAST-201ENST00000315285 FNDC10F2Z333 226 aa11.25□□□□□ -0.61
SPAST-201ENST00000315285 FBLN7Q53RD9 439 aa11.25□□□□□ -0.61
SPAST-201ENST00000315285 TPTE2P1Q5T6R2 138 aa11.25□□□□□ -0.61
SPAST-201ENST00000315285 SAMD13Q5VXD3 122 aa11.24□□□□□ -0.61
SPAST-201ENST00000315285 TMEM190Q8WZ59 177 aa11.24□□□□□ -0.61
SPAST-201ENST00000315285 BEX4Q9NWD9 120 aaPredicted RBP11.24□□□□□ -0.61
SPAST-201ENST00000315285 SHANK1Q9Y566 2161 aa11.24□□□□□ -0.61
SPAST-201ENST00000315285 ITGB1BP1O14713 200 aa11.24□□□□□ -0.61
SPAST-201ENST00000315285 PRR31Q5SQ13 230 aa11.24□□□□□ -0.61
SPAST-201ENST00000315285 NUP35Q8NFH5 326 aa11.24□□□□□ -0.61
SPAST-201ENST00000315285 SIGLEC9Q9Y336 463 aa11.24□□□□□ -0.61
SPAST-201ENST00000315285 TRAV21A0A0B4J279 112 aa11.24□□□□□ -0.61
SPAST-201ENST00000315285 TGFAP01135 160 aa11.24□□□□□ -0.61
SPAST-201ENST00000315285 IGLV3-1P01715 115 aa11.24□□□□□ -0.61
SPAST-201ENST00000315285 KLF17Q5JT82 389 aaPredicted RBP11.24□□□□□ -0.61
SPAST-201ENST00000315285 COPS9Q8WXC6 57 aa11.24□□□□□ -0.61
SPAST-201ENST00000315285 IGKV2-40A0A087WW87 121 aaPredicted RBP11.23□□□□□ -0.61
SPAST-201ENST00000315285 PSMB11A5LHX3 300 aa11.23□□□□□ -0.61
SPAST-201ENST00000315285 ZNF503-AS2A6NEH8 195 aa11.23□□□□□ -0.61
SPAST-201ENST00000315285 FAM181BA6NEQ2 426 aa11.23□□□□□ -0.61
SPAST-201ENST00000315285 C19orf67A6NJJ6 358 aa11.23□□□□□ -0.61
SPAST-201ENST00000315285 IGKV2D-40P01614 121 aaPredicted RBP11.23□□□□□ -0.61
SPAST-201ENST00000315285 SUMO2P61956 95 aaKnown RBP11.23□□□□□ -0.61
SPAST-201ENST00000315285 KLRD1Q13241 179 aa11.23□□□□□ -0.61
SPAST-201ENST00000315285 C15orf32Q32M92 178 aa11.23□□□□□ -0.61
SPAST-201ENST00000315285 ST20Q9HBF5 79 aa11.23□□□□□ -0.61
SPAST-201ENST00000315285 H3BUT2 72 aa11.23□□□□□ -0.61
SPAST-201ENST00000315285 IGKV1-39P01597 117 aa11.23□□□□□ -0.61
SPAST-201ENST00000315285 IGKV1D-39P04432 117 aa11.23□□□□□ -0.61
SPAST-201ENST00000315285 IFI27L1Q96BM0 104 aa11.23□□□□□ -0.61
SPAST-201ENST00000315285 F2Z2F3 143 aa11.23□□□□□ -0.61
SPAST-201ENST00000315285 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.23□□□□□ -0.61
SPAST-201ENST00000315285 RPL15P61313 204 aaKnown RBP11.23□□□□□ -0.61
SPAST-201ENST00000315285 LYPD2Q6UXB3 125 aa11.23□□□□□ -0.61
SPAST-201ENST00000315285 WDR86Q86TI4 376 aa11.23□□□□□ -0.61
SPAST-201ENST00000315285 DUX3Q96PT4 197 aa11.23□□□□□ -0.61
SPAST-201ENST00000315285 BUB1B-PAK6H3BSN5 160 aa11.23□□□□□ -0.61
SPAST-201ENST00000315285 CD7P09564 240 aa11.23□□□□□ -0.61
SPAST-201ENST00000315285 PAX8Q06710 450 aa11.23□□□□□ -0.61
SPAST-201ENST00000315285 IGKV3OR2-268A0A0C4DH90 116 aa11.22□□□□□ -0.61
SPAST-201ENST00000315285 EVI2AP22794 236 aa11.22□□□□□ -0.61
SPAST-201ENST00000315285 OR4X2Q8NGF9 303 aa11.22□□□□□ -0.61
SPAST-201ENST00000315285 C5orf30Q96GV9 206 aa11.22□□□□□ -0.61
SPAST-201ENST00000315285 DOCK11Q5JSL3 2073 aa11.22□□□□□ -0.61
SPAST-201ENST00000315285 DENND4CQ5VZ89 1909 aa11.22□□□□□ -0.61
SPAST-201ENST00000315285 DPM2O94777 84 aa11.22□□□□□ -0.61
SPAST-201ENST00000315285 NUTF2P61970 127 aaKnown RBP11.22□□□□□ -0.61
SPAST-201ENST00000315285 SRSF1Q07955 248 aaKnown RBP eCLIP11.22□□□□□ -0.61
SPAST-201ENST00000315285 C5orf64Q2M2E5 130 aa11.22□□□□□ -0.61
SPAST-201ENST00000315285 C10orf91Q5T1B1 145 aa11.22□□□□□ -0.61
SPAST-201ENST00000315285 ALKBH7Q9BT30 221 aaPredicted RBP11.22□□□□□ -0.61
SPAST-201ENST00000315285 CRIM1Q9NZV1 1036 aa11.22□□□□□ -0.61
SPAST-201ENST00000315285 LINC00527Q9UJ94 153 aa11.22□□□□□ -0.61
SPAST-201ENST00000315285 Q6ZR03 302 aa11.22□□□□□ -0.61
SPAST-201ENST00000315285 VMO1Q7Z5L0 202 aa11.22□□□□□ -0.61
SPAST-201ENST00000315285 TRAV8-1A0A0A6YYK1 113 aa11.22□□□□□ -0.61
SPAST-201ENST00000315285 ERVK11-1P61568 191 aa11.22□□□□□ -0.61
SPAST-201ENST00000315285 ITLN2Q8WWU7 325 aaPredicted RBP11.22□□□□□ -0.61
SPAST-201ENST00000315285 OOSP1A8MZH6 123 aa11.21□□□□□ -0.61
SPAST-201ENST00000315285 PFN1P07737 140 aaKnown RBP11.21□□□□□ -0.61
SPAST-201ENST00000315285 CD33P20138 364 aa11.21□□□□□ -0.61
SPAST-201ENST00000315285 ABCA4P78363 2273 aa11.21□□□□□ -0.61
SPAST-201ENST00000315285 TRAV40A0A0B4J280 105 aa11.21□□□□□ -0.61
SPAST-201ENST00000315285 APOMO95445 188 aa11.21□□□□□ -0.61
SPAST-201ENST00000315285 C3orf79P0CE67 100 aa11.21□□□□□ -0.61
SPAST-201ENST00000315285 DOCK10Q96BY6 2186 aa11.21□□□□□ -0.62
SPAST-201ENST00000315285 BEND2Q8NDZ0 799 aa11.21□□□□□ -0.62
SPAST-201ENST00000315285 ZNRD1Q9P1U0 126 aa11.21□□□□□ -0.62
SPAST-201ENST00000315285 YLPM1P49750 1951 aaKnown RBP11.21□□□□□ -0.62
SPAST-201ENST00000315285 A0A1B0GWB2 263 aa11.21□□□□□ -0.62
SPAST-201ENST00000315285 D6R8Y8 96 aa11.21□□□□□ -0.62
SPAST-201ENST00000315285 IL15RAQ13261 267 aa11.21□□□□□ -0.62
SPAST-201ENST00000315285 ZNF726P1Q15940 193 aa11.21□□□□□ -0.62
SPAST-201ENST00000315285 MINOS1Q5TGZ0 78 aa11.2□□□□□ -0.62
SPAST-201ENST00000315285 LCN12Q6JVE5 192 aa11.2□□□□□ -0.62
SPAST-201ENST00000315285 MRAP2Q96G30 205 aa11.2□□□□□ -0.62
SPAST-201ENST00000315285 TMEM14BQ9NUH8 114 aa11.2□□□□□ -0.62
SPAST-201ENST00000315285 MINOS1-NBL1R4GNA1 71 aa11.2□□□□□ -0.62
SPAST-201ENST00000315285 TRAV41A0A0B4J266 112 aa11.2□□□□□ -0.62
SPAST-201ENST00000315285 LYZL1Q6UWQ5 148 aa11.2□□□□□ -0.62
SPAST-201ENST00000315285 SIGLEC15Q6ZMC9 328 aa11.2□□□□□ -0.62
SPAST-201ENST00000315285 RNF166Q96A37 237 aaPredicted RBP11.2□□□□□ -0.62
SPAST-201ENST00000315285 LINC00479Q96M42 142 aa11.2□□□□□ -0.62
SPAST-201ENST00000315285 NHP2Q9NX24 153 aaKnown RBP11.2□□□□□ -0.62
SPAST-201ENST00000315285 MOB4Q9Y3A3 225 aa11.2□□□□□ -0.62
SPAST-201ENST00000315285 A6NNC1 897 aa11.2□□□□□ -0.62
SPAST-201ENST00000315285 MRPL27Q9P0M9 148 aaKnown RBP11.2□□□□□ -0.62
SPAST-201ENST00000315285 NCR2O95944 276 aa11.2□□□□□ -0.62
SPAST-201ENST00000315285 ORMDL2Q53FV1 153 aa11.2□□□□□ -0.62
SPAST-201ENST00000315285 ZNF329Q86UD4 541 aa11.2□□□□□ -0.62
SPAST-201ENST00000315285 ZNF664Q8N3J9 261 aa11.2□□□□□ -0.62
SPAST-201ENST00000315285 ZNF418Q8TF45 676 aaPredicted RBP11.2□□□□□ -0.62
SPAST-201ENST00000315285 MS4A6AQ9H2W1 248 aa11.2□□□□□ -0.62
SPAST-201ENST00000315285 A0A1W2PPI3 338 aa11.19□□□□□ -0.62
SPAST-201ENST00000315285 NPFFR1Q9GZQ6 430 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms