RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 FBLN7Q53RD9 439 aa11.8□□□□□ -0.52
PTPN9-201ENST00000306726 SP5Q6BEB4 398 aaPredicted RBP11.8□□□□□ -0.52
PTPN9-201ENST00000306726 NEUROG1Q92886 237 aa11.8□□□□□ -0.52
PTPN9-201ENST00000306726 IZUMO1RA6ND01 250 aa11.8□□□□□ -0.52
PTPN9-201ENST00000306726 NCBP2LA6PVI3 153 aaKnown RBP11.8□□□□□ -0.52
PTPN9-201ENST00000306726 PRRG2O14669 202 aa11.8□□□□□ -0.52
PTPN9-201ENST00000306726 YPEL1O60688 119 aa11.8□□□□□ -0.52
PTPN9-201ENST00000306726 OR2J3O76001 311 aa11.8□□□□□ -0.52
PTPN9-201ENST00000306726 MT-ND6P03923 174 aa11.8□□□□□ -0.52
PTPN9-201ENST00000306726 ZNF503Q96F45 646 aa11.8□□□□□ -0.52
PTPN9-201ENST00000306726 YPEL2Q96QA6 119 aa11.8□□□□□ -0.52
PTPN9-201ENST00000306726 C20orf144Q9BQM9 153 aa11.8□□□□□ -0.52
PTPN9-201ENST00000306726 NDUFB3O43676 98 aa11.79□□□□□ -0.52
PTPN9-201ENST00000306726 FAM57AQ8TBR7 257 aa11.79□□□□□ -0.52
PTPN9-201ENST00000306726 ONECUT1Q9UBC0 465 aa11.79□□□□□ -0.52
PTPN9-201ENST00000306726 CD69Q07108 199 aa11.79□□□□□ -0.52
PTPN9-201ENST00000306726 C17orf58Q2M2W7 97 aa11.79□□□□□ -0.52
PTPN9-201ENST00000306726 GDF5OSQ5U4N7 250 aa11.79□□□□□ -0.52
PTPN9-201ENST00000306726 C1orf159Q96HA4 380 aa11.79□□□□□ -0.52
PTPN9-201ENST00000306726 APOHP02749 345 aaPredicted RBP11.79□□□□□ -0.52
PTPN9-201ENST00000306726 CENPVQ7Z7K6 275 aaPredicted RBP11.79□□□□□ -0.52
PTPN9-201ENST00000306726 TMUB1Q9BVT8 246 aa11.79□□□□□ -0.52
PTPN9-201ENST00000306726 A0A1W2PRE2 83 aa11.78□□□□□ -0.52
PTPN9-201ENST00000306726 NCR2O95944 276 aa11.78□□□□□ -0.52
PTPN9-201ENST00000306726 FCGR2BP31994 310 aaPredicted RBP11.78□□□□□ -0.52
PTPN9-201ENST00000306726 WT1-ASQ06250 92 aa11.78□□□□□ -0.52
PTPN9-201ENST00000306726 Q8NA96 180 aa11.78□□□□□ -0.52
PTPN9-201ENST00000306726 C17orf77Q96MU5 243 aa11.78□□□□□ -0.52
PTPN9-201ENST00000306726 ZNF714Q96N38 554 aa11.78□□□□□ -0.52
PTPN9-201ENST00000306726 K7EM74 188 aa11.78□□□□□ -0.52
PTPN9-201ENST00000306726 SLC25A34Q6PIV7 304 aa11.78□□□□□ -0.52
PTPN9-201ENST00000306726 MAP1LC3CQ9BXW4 147 aa11.78□□□□□ -0.52
PTPN9-201ENST00000306726 A0A1B0GWJ7 208 aa11.77□□□□□ -0.52
PTPN9-201ENST00000306726 RNASE2P10153 161 aaKnown RBP11.77□□□□□ -0.52
PTPN9-201ENST00000306726 C1orf185Q5T7R7 199 aa11.77□□□□□ -0.52
PTPN9-201ENST00000306726 RUSC1-AS1Q66K80 236 aa11.77□□□□□ -0.52
PTPN9-201ENST00000306726 GFRALQ6UXV0 394 aa11.77□□□□□ -0.52
PTPN9-201ENST00000306726 MTURNQ8N3F0 131 aa11.77□□□□□ -0.52
PTPN9-201ENST00000306726 OSTCQ9NRP0 149 aa11.77□□□□□ -0.52
PTPN9-201ENST00000306726 INSIG2Q9Y5U4 225 aa11.77□□□□□ -0.52
PTPN9-201ENST00000306726 CUBNO60494 3623 aa11.77□□□□□ -0.52
PTPN9-201ENST00000306726 TRAV9-2A0A087WT02 112 aa11.77□□□□□ -0.53
PTPN9-201ENST00000306726 SFXN3Q9BWM7 321 aa11.77□□□□□ -0.53
PTPN9-201ENST00000306726 NDUFB8O95169 186 aa11.77□□□□□ -0.53
PTPN9-201ENST00000306726 IGHV1-46P01743 117 aa11.77□□□□□ -0.53
PTPN9-201ENST00000306726 P0C879 139 aa11.77□□□□□ -0.53
PTPN9-201ENST00000306726 ARF6P62330 175 aa11.77□□□□□ -0.53
PTPN9-201ENST00000306726 VMA21Q3ZAQ7 101 aa11.77□□□□□ -0.53
PTPN9-201ENST00000306726 ZNF474Q6S9Z5 364 aaPredicted RBP11.77□□□□□ -0.53
PTPN9-201ENST00000306726 LINC00322Q6ZN03 302 aaPredicted RBP11.77□□□□□ -0.53
PTPN9-201ENST00000306726 RAB1CQ92928 201 aa11.77□□□□□ -0.53
PTPN9-201ENST00000306726 Q9H3A6 140 aa11.77□□□□□ -0.53
PTPN9-201ENST00000306726 AKAP13Q12802 2813 aa11.77□□□□□ -0.53
PTPN9-201ENST00000306726 HBBP68871 147 aa11.76□□□□□ -0.53
PTPN9-201ENST00000306726 PRCDQ00LT1 54 aa11.76□□□□□ -0.53
PTPN9-201ENST00000306726 COTL1Q14019 142 aa11.76□□□□□ -0.53
PTPN9-201ENST00000306726 TMEM191AQ9H0A3 160 aa11.76□□□□□ -0.53
PTPN9-201ENST00000306726 KLK15Q9H2R5 256 aa11.76□□□□□ -0.53
PTPN9-201ENST00000306726 A8MWL6 223 aa11.76□□□□□ -0.53
PTPN9-201ENST00000306726 SS18L1O75177 396 aaPredicted RBP11.76□□□□□ -0.53
PTPN9-201ENST00000306726 CT45A10P0DMU9 189 aa11.76□□□□□ -0.53
PTPN9-201ENST00000306726 LCNL1Q6ZST4 164 aa11.76□□□□□ -0.53
PTPN9-201ENST00000306726 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.75□□□□□ -0.53
PTPN9-201ENST00000306726 ZNF207O43670 478 aaKnown RBP11.75□□□□□ -0.53
PTPN9-201ENST00000306726 IGKV3-15P01624 115 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 SLC25A2Q9BXI2 301 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 HIF1ANQ9NWT6 349 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 THYN1Q9P016 225 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 EPDR1Q9UM22 224 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 POLQO75417 2590 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 TNFRSF1AP19438 455 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 LRRC10Q5BKY1 277 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 SPATA12Q7Z6I5 190 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 MBD3L4A6NDZ8 208 aaPredicted RBP11.75□□□□□ -0.53
PTPN9-201ENST00000306726 MBD3L3A6NE82 208 aaPredicted RBP11.75□□□□□ -0.53
PTPN9-201ENST00000306726 MBD3L5A6NJ08 208 aaPredicted RBP11.75□□□□□ -0.53
PTPN9-201ENST00000306726 SPRY2O43597 315 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 ORM1P02763 201 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 KIR2DS2P43631 304 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 RPL27AP46776 148 aaKnown RBP11.75□□□□□ -0.53
PTPN9-201ENST00000306726 PRR20EP86478 221 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 PRR20CP86479 221 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 PRR20DP86480 221 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 PRR20BP86481 221 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 PRR20AP86496 221 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 MBD3L2Q8NHZ7 208 aaPredicted RBP11.75□□□□□ -0.53
PTPN9-201ENST00000306726 Q8TAT8 98 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 TXNDC17Q9BRA2 123 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 TMEM14BQ9NUH8 114 aa11.75□□□□□ -0.53
PTPN9-201ENST00000306726 FOXA2Q9Y261 457 aaPredicted RBP11.75□□□□□ -0.53
PTPN9-201ENST00000306726 GOSR1O95249 250 aa11.74□□□□□ -0.53
PTPN9-201ENST00000306726 RPEQ96AT9 228 aa11.74□□□□□ -0.53
PTPN9-201ENST00000306726 PERPQ96FX8 193 aa11.74□□□□□ -0.53
PTPN9-201ENST00000306726 RASL11BQ9BPW5 248 aa11.74□□□□□ -0.53
PTPN9-201ENST00000306726 TTTY13Q9BZ97 58 aa11.74□□□□□ -0.53
PTPN9-201ENST00000306726 H3BUT2 72 aa11.74□□□□□ -0.53
PTPN9-201ENST00000306726 ZNF257Q9Y2Q1 563 aa11.74□□□□□ -0.53
PTPN9-201ENST00000306726 ARMS2P0C7Q2 107 aa11.74□□□□□ -0.53
PTPN9-201ENST00000306726 CFHR2P36980 270 aa11.74□□□□□ -0.53
PTPN9-201ENST00000306726 MBNL2Q5VZF2 373 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms