RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 RPUSD1Q9UJJ7 312 aaKnown RBP6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 INS-IGF2F8WCM5 200 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 INSP01308 110 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 B3GALT5-AS1P59052 145 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 RPL39P5Q59GN2 51 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 TRBV7-1A0A0A6YYK4 115 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 F2Z2F3 143 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 ATXN8Q156A1 80 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 RBM38Q9H0Z9 239 aaKnown RBP6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 V9GYH0 126 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 CGB3P0DN86 165 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 GZMBP10144 247 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 ZNF79Q15937 498 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 C2orf68Q2NKX9 166 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 MCRIP2Q9BUT9 160 aaKnown RBP6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 Q9H3A6 140 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 ZMAT4Q9H898 229 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 MSMBP08118 114 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 CGB7P0DN87 165 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 IGFBP3P17936 291 aaPredicted RBP6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 LINC01559Q495D7 138 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 SIGLEC15Q6ZMC9 328 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 C11orf44Q8N8P7 122 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 DNAJC30Q96LL9 226 aa6.9□□□□□ -1.3
PCDHB1-201ENST00000306549 CELA3BP08861 270 aa6.9□□□□□ -1.31
PCDHB1-201ENST00000306549 ATG2AQ2TAZ0 1938 aa6.9□□□□□ -1.31
PCDHB1-201ENST00000306549 UCP1P25874 307 aa6.9□□□□□ -1.31
PCDHB1-201ENST00000306549 SS18Q15532 418 aa6.9□□□□□ -1.31
PCDHB1-201ENST00000306549 OR10W1Q8NGF6 305 aa6.9□□□□□ -1.31
PCDHB1-201ENST00000306549 RCHY1Q96PM5 261 aa6.9□□□□□ -1.31
PCDHB1-201ENST00000306549 AMELYQ99218 206 aa6.9□□□□□ -1.31
PCDHB1-201ENST00000306549 USP9XQ93008 2570 aaPredicted RBP6.9□□□□□ -1.31
PCDHB1-201ENST00000306549 TRAV9-1A0A075B6T8 112 aa6.9□□□□□ -1.31
PCDHB1-201ENST00000306549 DLX4Q92988 240 aaPredicted RBP6.9□□□□□ -1.31
PCDHB1-201ENST00000306549 PPP1R3EQ9H7J1 279 aa6.9□□□□□ -1.31
PCDHB1-201ENST00000306549 TRBV6-6A0A0A6YYG2 114 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 PINLYPA6NC86 204 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 VWC2LB2RUY7 222 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 TNFSF13O75888 250 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 OR9G9P0C7N8 305 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 C1QTNF9P0C862 333 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 PRCDQ00LT1 54 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 S4R3C0 116 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 TRAV41A0A0B4J266 112 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 C12orf77C9JDV5 145 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 TIMM23O14925 209 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 PAX4O43316 350 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 HLA-DQB1P01920 261 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 MUC21Q5SSG8 566 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 FOXL2NBQ6ZUU3 175 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 GLMPQ8WWB7 406 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 A0A1B0GTI1 187 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 HBDP02042 147 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 MORN2Q502X0 79 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 DPRXA6NFQ7 191 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 RNF125Q96EQ8 232 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 KLF12Q9Y4X4 402 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 TRAV8-2A0A0B4J237 113 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 Q5PR19 223 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 C1orf122Q6ZSJ8 110 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 ARHGAP32A7KAX9 2087 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 TRBV6-7A0A0A0MS04 114 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 M0R2P5 195 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 ZNHIT1O43257 154 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 CXCL3P19876 107 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 Q8TCH9 128 aa6.89□□□□□ -1.31
PCDHB1-201ENST00000306549 FAM216BQ8N7L0 139 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 RASL10AQ92737 203 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 FAM223BA6NKX1 122 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 TMEM238C9JI98 176 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 TNFRSF6BO95407 300 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 P2RY4P51582 365 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 FAM223AQ8IWN6 122 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 GATD1Q8NB37 220 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 VMO1Q7Z5L0 202 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 RBMY1FQ15415 496 aaKnown RBP6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 RASL11AQ6T310 242 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 NABP1Q96AH0 204 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 TMEM126AQ9H061 195 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 TRGV1A0A0A0MS02 117 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 IGHV4-39P01824 125 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 CD55P08174 381 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 PRTN3P24158 256 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 MPZP25189 248 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 C6orf226Q5I0X4 101 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 C9orf62Q8N4C0 152 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 IL36BQ9NZH7 164 aa6.88□□□□□ -1.31
PCDHB1-201ENST00000306549 DPM2O94777 84 aa6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 ERCC8Q13216 396 aa6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 ZNF474Q6S9Z5 364 aaPredicted RBP6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 OR11H7Q8NGC8 314 aa6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 MESP1Q9BRJ9 268 aa6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 USP9YO00507 2555 aaPredicted RBP6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 CLPSP04118 112 aa6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 RPL35AP18077 110 aaKnown RBP6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 RAI1Q7Z5J4 1906 aaPredicted RBP6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 ZNF562Q6V9R5 426 aa6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 SLC25A48Q6ZT89 311 aaKnown RBP6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 KLHL30-AS1Q8NEE0 82 aa6.87□□□□□ -1.31
PCDHB1-201ENST00000306549 SPCS1Q9Y6A9 102 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms