RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 AAMDCQ9H7C9 122 aa10.6□□□□□ -0.71
TRIM35-201ENST00000305364 EXPH5Q8NEV8 1989 aa10.6□□□□□ -0.71
TRIM35-201ENST00000305364 SMIM13P0DJ93 91 aa10.6□□□□□ -0.71
TRIM35-201ENST00000305364 CCL8P80075 99 aa10.6□□□□□ -0.71
TRIM35-201ENST00000305364 KIR3DS1Q14943 382 aa10.6□□□□□ -0.71
TRIM35-201ENST00000305364 ATP1A1-AS1Q5TC04 95 aa10.6□□□□□ -0.71
TRIM35-201ENST00000305364 OSR1Q8TAX0 266 aaPredicted RBP10.6□□□□□ -0.71
TRIM35-201ENST00000305364 RASL11BQ9BPW5 248 aa10.6□□□□□ -0.71
TRIM35-201ENST00000305364 IGKV1OR2-108A0A075B7D4 117 aa10.6□□□□□ -0.71
TRIM35-201ENST00000305364 NKX2-8O15522 239 aa10.6□□□□□ -0.71
TRIM35-201ENST00000305364 ACP1P24666 158 aa10.6□□□□□ -0.71
TRIM35-201ENST00000305364 OR1N2Q8NGR9 330 aa10.6□□□□□ -0.71
TRIM35-201ENST00000305364 VCANP13611 3396 aa10.6□□□□□ -0.71
TRIM35-201ENST00000305364 FNDC10F2Z333 226 aa10.6□□□□□ -0.71
TRIM35-201ENST00000305364 TEX45Q8NA69 505 aa10.6□□□□□ -0.71
TRIM35-201ENST00000305364 OR4C13Q8NGP0 309 aa10.6□□□□□ -0.71
TRIM35-201ENST00000305364 IGF2BP2-AS1Q96M15 143 aa10.6□□□□□ -0.71
TRIM35-201ENST00000305364 COL4A2P08572 1712 aa10.59□□□□□ -0.71
TRIM35-201ENST00000305364 C10orf142B7Z368 130 aa10.59□□□□□ -0.71
TRIM35-201ENST00000305364 IGLV2-8P01709 118 aa10.59□□□□□ -0.71
TRIM35-201ENST00000305364 C1orf185Q5T7R7 199 aa10.59□□□□□ -0.71
TRIM35-201ENST00000305364 C11orf53Q8IXP5 236 aa10.59□□□□□ -0.71
TRIM35-201ENST00000305364 HES1Q14469 280 aa10.59□□□□□ -0.71
TRIM35-201ENST00000305364 GDF5OSQ5U4N7 250 aa10.59□□□□□ -0.71
TRIM35-201ENST00000305364 CCL17Q92583 94 aa10.59□□□□□ -0.71
TRIM35-201ENST00000305364 TMEM186Q96B77 213 aa10.59□□□□□ -0.71
TRIM35-201ENST00000305364 PRELID3AQ96N28 172 aa10.59□□□□□ -0.71
TRIM35-201ENST00000305364 SPRR3Q9UBC9 169 aa10.59□□□□□ -0.71
TRIM35-201ENST00000305364 SPTBN4Q9H254 2564 aa10.59□□□□□ -0.71
TRIM35-201ENST00000305364 OR2J3O76001 311 aa10.59□□□□□ -0.71
TRIM35-201ENST00000305364 ZNF883P0CG24 379 aa10.59□□□□□ -0.71
TRIM35-201ENST00000305364 ZNF503Q96F45 646 aa10.59□□□□□ -0.71
TRIM35-201ENST00000305364 ASCL2Q99929 193 aa10.59□□□□□ -0.71
TRIM35-201ENST00000305364 GTSF1LQ9H1H1 148 aa10.59□□□□□ -0.71
TRIM35-201ENST00000305364 COL5A1P20908 1838 aaPredicted RBP10.59□□□□□ -0.71
TRIM35-201ENST00000305364 PIEZO2Q9H5I5 2752 aa10.58□□□□□ -0.71
TRIM35-201ENST00000305364 NTN3O00634 580 aaPredicted RBP10.58□□□□□ -0.72
TRIM35-201ENST00000305364 RPL27AP46776 148 aaKnown RBP10.58□□□□□ -0.72
TRIM35-201ENST00000305364 IGF2RP11717 2491 aa10.58□□□□□ -0.72
TRIM35-201ENST00000305364 F2RL2O00254 374 aa10.58□□□□□ -0.72
TRIM35-201ENST00000305364 NDUFB3O43676 98 aa10.58□□□□□ -0.72
TRIM35-201ENST00000305364 TCRAP04437 139 aa10.58□□□□□ -0.72
TRIM35-201ENST00000305364 EIF4EBP1Q13541 118 aaPredicted RBP10.58□□□□□ -0.72
TRIM35-201ENST00000305364 TWIST1Q15672 202 aa10.58□□□□□ -0.72
TRIM35-201ENST00000305364 TMEM189A5PLL7 270 aa10.57□□□□□ -0.72
TRIM35-201ENST00000305364 COX8AP10176 69 aa10.57□□□□□ -0.72
TRIM35-201ENST00000305364 HSD52Q0P140 79 aa10.57□□□□□ -0.72
TRIM35-201ENST00000305364 ZNF714Q96N38 554 aa10.57□□□□□ -0.72
TRIM35-201ENST00000305364 PTPN13Q12923 2485 aa10.57□□□□□ -0.72
TRIM35-201ENST00000305364 PLCE1Q9P212 2302 aa10.57□□□□□ -0.72
TRIM35-201ENST00000305364 PRSS46E5RG02 174 aa10.57□□□□□ -0.72
TRIM35-201ENST00000305364 EXOC3-AS1Q8N2X6 119 aa10.57□□□□□ -0.72
TRIM35-201ENST00000305364 TMEM105Q8N8V8 129 aa10.57□□□□□ -0.72
TRIM35-201ENST00000305364 RABAC1Q9UI14 185 aa10.57□□□□□ -0.72
TRIM35-201ENST00000305364 MED13Q9UHV7 2174 aa10.57□□□□□ -0.72
TRIM35-201ENST00000305364 CEP295Q9C0D2 2601 aa10.57□□□□□ -0.72
TRIM35-201ENST00000305364 CCL3L1P16619 93 aa10.57□□□□□ -0.72
TRIM35-201ENST00000305364 LOXL3P58215 753 aa10.57□□□□□ -0.72
TRIM35-201ENST00000305364 SSBP2P81877 361 aaPredicted RBP10.57□□□□□ -0.72
TRIM35-201ENST00000305364 OR5AN1Q8NGI8 311 aa10.57□□□□□ -0.72
TRIM35-201ENST00000305364 OR5A1Q8NGJ0 315 aa10.57□□□□□ -0.72
TRIM35-201ENST00000305364 SRRM4A7MD48 611 aaKnown RBP10.56□□□□□ -0.72
TRIM35-201ENST00000305364 ORM1P02763 201 aa10.56□□□□□ -0.72
TRIM35-201ENST00000305364 SAMD5Q5TGI4 173 aa10.56□□□□□ -0.72
TRIM35-201ENST00000305364 C9orf118A6NHY6 69 aa10.56□□□□□ -0.72
TRIM35-201ENST00000305364 ARMS2P0C7Q2 107 aa10.56□□□□□ -0.72
TRIM35-201ENST00000305364 RPS20P60866 119 aaKnown RBP10.56□□□□□ -0.72
TRIM35-201ENST00000305364 OR4X2Q8NGF9 303 aa10.56□□□□□ -0.72
TRIM35-201ENST00000305364 SCNM1Q9BWG6 230 aa10.56□□□□□ -0.72
TRIM35-201ENST00000305364 NHP2Q9NX24 153 aaKnown RBP10.56□□□□□ -0.72
TRIM35-201ENST00000305364 A0A1B0GV72 72 aa10.55□□□□□ -0.72
TRIM35-201ENST00000305364 FAM90A27PA6NNH2 459 aa10.55□□□□□ -0.72
TRIM35-201ENST00000305364 IFI27P40305 119 aaPredicted RBP10.55□□□□□ -0.72
TRIM35-201ENST00000305364 RHOGP84095 191 aa10.55□□□□□ -0.72
TRIM35-201ENST00000305364 SCRT2Q9NQ03 307 aa10.55□□□□□ -0.72
TRIM35-201ENST00000305364 PLXNB1O43157 2135 aa10.55□□□□□ -0.72
TRIM35-201ENST00000305364 PRSS57Q6UWY2 283 aa10.55□□□□□ -0.72
TRIM35-201ENST00000305364 FAM90A1Q86YD7 464 aa10.55□□□□□ -0.72
TRIM35-201ENST00000305364 ORMDL3Q8N138 153 aa10.55□□□□□ -0.72
TRIM35-201ENST00000305364 HIF1ANQ9NWT6 349 aa10.55□□□□□ -0.72
TRIM35-201ENST00000305364 IGLC1P0CG04 106 aa10.54□□□□□ -0.72
TRIM35-201ENST00000305364 DUX4L9Q6RFH8 374 aaPredicted RBP10.54□□□□□ -0.72
TRIM35-201ENST00000305364 SPATA12Q7Z6I5 190 aa10.54□□□□□ -0.72
TRIM35-201ENST00000305364 FXYD5Q96DB9 178 aa10.54□□□□□ -0.72
TRIM35-201ENST00000305364 SIGMAR1Q99720 223 aa10.54□□□□□ -0.72
TRIM35-201ENST00000305364 D6R8Y8 96 aa10.54□□□□□ -0.72
TRIM35-201ENST00000305364 H3BRM9 83 aa10.54□□□□□ -0.72
TRIM35-201ENST00000305364 GOSR1O95249 250 aa10.54□□□□□ -0.72
TRIM35-201ENST00000305364 SLC25A48Q6ZT89 311 aaKnown RBP10.54□□□□□ -0.72
TRIM35-201ENST00000305364 IFI27L1Q96BM0 104 aa10.54□□□□□ -0.72
TRIM35-201ENST00000305364 FAM167A-AS1Q96KT0 104 aa10.54□□□□□ -0.72
TRIM35-201ENST00000305364 RPUSD1Q9UJJ7 312 aaKnown RBP10.54□□□□□ -0.72
TRIM35-201ENST00000305364 PRRC2CQ9Y520 2896 aaKnown RBP10.54□□□□□ -0.72
TRIM35-201ENST00000305364 IGHV1-18A0A0C4DH31 117 aa10.54□□□□□ -0.72
TRIM35-201ENST00000305364 TIMM23BQ5SRD1 257 aa10.54□□□□□ -0.72
TRIM35-201ENST00000305364 CLEC2AQ6UVW9 174 aa10.54□□□□□ -0.72
TRIM35-201ENST00000305364 OR9G4Q8NGQ1 327 aa10.54□□□□□ -0.72
TRIM35-201ENST00000305364 NDFIP1Q9BT67 221 aa10.54□□□□□ -0.72
TRIM35-201ENST00000305364 HBDP02042 147 aa10.54□□□□□ -0.72
TRIM35-201ENST00000305364 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.53□□□□□ -0.722e-7■■■■□ 26.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms