RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 MEGF9Q9H1U4 602 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 NOTCH3Q9UM47 2321 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 SPTAN1Q13813 2472 aaKnown RBP11.43□□□□□ -0.58
PRKCB-201ENST00000303531 A0A1B0GWJ7 208 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 ZNF815PA8K554 130 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 NCR2O95944 276 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 CD28P10747 220 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 LINC00205P59089 165 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 TRAV2A0A0B4J234 112 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 NTF4P34130 210 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 RNF182Q8N6D2 247 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 CRIM1Q9NZV1 1036 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 CACNA1GO43497 2377 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 H0YJW9 148 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 TCRAP04437 139 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 B3GALT5-AS1P59052 145 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 TRGV9Q99603 122 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 DOCK8Q8NF50 2099 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 SIP14410 1827 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 D6R8Y8 96 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 TMEM95Q3KNT9 176 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 TPTE2P1Q5T6R2 138 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 TMEM219Q86XT9 240 aa11.43□□□□□ -0.58
PRKCB-201ENST00000303531 TNFSF13O75888 250 aa11.42□□□□□ -0.58
PRKCB-201ENST00000303531 LRRK1Q38SD2 2015 aa11.42□□□□□ -0.58
PRKCB-201ENST00000303531 BEND2Q8NDZ0 799 aa11.42□□□□□ -0.58
PRKCB-201ENST00000303531 TRGV11A0A075B6L2 103 aa11.42□□□□□ -0.58
PRKCB-201ENST00000303531 TRAV8-2A0A0B4J237 113 aa11.42□□□□□ -0.58
PRKCB-201ENST00000303531 TRAV12-3A0A0B4J271 114 aa11.42□□□□□ -0.58
PRKCB-201ENST00000303531 HOXA3O43365 443 aaPredicted RBP11.42□□□□□ -0.58
PRKCB-201ENST00000303531 ACTL10Q5JWF8 245 aa11.42□□□□□ -0.58
PRKCB-201ENST00000303531 MDS2Q8NDY4 140 aa11.42□□□□□ -0.58
PRKCB-201ENST00000303531 COL6A6A6NMZ7 2263 aa11.42□□□□□ -0.58
PRKCB-201ENST00000303531 GAFA1Q96PS6 74 aa11.42□□□□□ -0.58
PRKCB-201ENST00000303531 YLPM1P49750 1951 aaKnown RBP11.42□□□□□ -0.58
PRKCB-201ENST00000303531 LINC00469Q8N7U9 141 aa11.42□□□□□ -0.58
PRKCB-201ENST00000303531 A0A0G2JRQ6 117 aa11.42□□□□□ -0.58
PRKCB-201ENST00000303531 A6NNC1 897 aa11.42□□□□□ -0.58
PRKCB-201ENST00000303531 SRSF4Q08170 494 aaKnown RBP11.42□□□□□ -0.58
PRKCB-201ENST00000303531 MALP21145 153 aa11.41□□□□□ -0.58
PRKCB-201ENST00000303531 DOCK11Q5JSL3 2073 aa11.41□□□□□ -0.58
PRKCB-201ENST00000303531 PAX2Q02962 417 aa11.41□□□□□ -0.58
PRKCB-201ENST00000303531 KLF17Q5JT82 389 aaPredicted RBP11.41□□□□□ -0.58
PRKCB-201ENST00000303531 LAGE3Q14657 143 aa11.41□□□□□ -0.58
PRKCB-201ENST00000303531 LYZL1Q6UWQ5 148 aa11.41□□□□□ -0.58
PRKCB-201ENST00000303531 TMEM256Q8N2U0 113 aa11.41□□□□□ -0.58
PRKCB-201ENST00000303531 IGKV1D-17A0A075B6S4 117 aa11.41□□□□□ -0.58
PRKCB-201ENST00000303531 CD300EQ496F6 205 aaPredicted RBP11.41□□□□□ -0.58
PRKCB-201ENST00000303531 DMRTC2Q8IXT2 367 aaPredicted RBP11.41□□□□□ -0.58
PRKCB-201ENST00000303531 IGHV3-64A0A075B6Q5 118 aa11.41□□□□□ -0.58
PRKCB-201ENST00000303531 FHL1Q13642 323 aa11.41□□□□□ -0.58
PRKCB-201ENST00000303531 C20orf204Q6ZNR8 217 aa11.41□□□□□ -0.58
PRKCB-201ENST00000303531 C15orf62A8K5M9 175 aa11.4□□□□□ -0.58
PRKCB-201ENST00000303531 LYL1P12980 280 aa11.4□□□□□ -0.58
PRKCB-201ENST00000303531 C11orf44Q8N8P7 122 aa11.4□□□□□ -0.58
PRKCB-201ENST00000303531 HSD52Q0P140 79 aa11.4□□□□□ -0.58
PRKCB-201ENST00000303531 RASL11AQ6T310 242 aa11.4□□□□□ -0.58
PRKCB-201ENST00000303531 Q6ZS49 121 aa11.4□□□□□ -0.58
PRKCB-201ENST00000303531 BMPERQ8N8U9 685 aa11.4□□□□□ -0.58
PRKCB-201ENST00000303531 NUP35Q8NFH5 326 aa11.4□□□□□ -0.58
PRKCB-201ENST00000303531 TRPM7Q96QT4 1865 aa11.4□□□□□ -0.59
PRKCB-201ENST00000303531 ERVK11-1P61568 191 aa11.4□□□□□ -0.59
PRKCB-201ENST00000303531 MS4A6AQ9H2W1 248 aa11.4□□□□□ -0.59
PRKCB-201ENST00000303531 SLC25A2Q9BXI2 301 aa11.39□□□□□ -0.59
PRKCB-201ENST00000303531 PGPEP1Q9NXJ5 209 aa11.39□□□□□ -0.59
PRKCB-201ENST00000303531 TRGV4A0A0C4DH28 118 aa11.39□□□□□ -0.59
PRKCB-201ENST00000303531 A0A0G2JNJ9 132 aa11.39□□□□□ -0.59
PRKCB-201ENST00000303531 Q6ZRM9 215 aa11.39□□□□□ -0.59
PRKCB-201ENST00000303531 FOXL2NBQ6ZUU3 175 aa11.39□□□□□ -0.59
PRKCB-201ENST00000303531 GTSCR1Q86UQ5 136 aa11.39□□□□□ -0.59
PRKCB-201ENST00000303531 RNF5Q99942 180 aa11.39□□□□□ -0.59
PRKCB-201ENST00000303531 Q9UFV3 132 aa11.39□□□□□ -0.59
PRKCB-201ENST00000303531 PLNP26678 52 aa11.39□□□□□ -0.59
PRKCB-201ENST00000303531 SBF1O95248 1867 aa11.39□□□□□ -0.59
PRKCB-201ENST00000303531 EFNA4P52798 201 aa11.39□□□□□ -0.59
PRKCB-201ENST00000303531 FXYD7P58549 80 aa11.39□□□□□ -0.59
PRKCB-201ENST00000303531 NCOR1O75376 2440 aa11.39□□□□□ -0.59
PRKCB-201ENST00000303531 SEC11AP67812 179 aa11.38□□□□□ -0.59
PRKCB-201ENST00000303531 Q8TAT8 98 aa11.38□□□□□ -0.59
PRKCB-201ENST00000303531 ZNF479Q96JC4 524 aa11.38□□□□□ -0.59
PRKCB-201ENST00000303531 VWA8A3KMH1 1905 aa11.38□□□□□ -0.59
PRKCB-201ENST00000303531 BUB1B-PAK6H3BSN5 160 aa11.38□□□□□ -0.59
PRKCB-201ENST00000303531 SMPXQ9UHP9 88 aa11.38□□□□□ -0.59
PRKCB-201ENST00000303531 LY96Q9Y6Y9 160 aa11.38□□□□□ -0.59
PRKCB-201ENST00000303531 A0A0U1RRA0 63 aa11.38□□□□□ -0.59
PRKCB-201ENST00000303531 ADCYAP1P18509 176 aa11.38□□□□□ -0.59
PRKCB-201ENST00000303531 C5orf64Q2M2E5 130 aa11.38□□□□□ -0.59
PRKCB-201ENST00000303531 MINOS1Q5TGZ0 78 aa11.38□□□□□ -0.59
PRKCB-201ENST00000303531 OR2K2Q8NGT1 345 aa11.38□□□□□ -0.59
PRKCB-201ENST00000303531 TMEM190Q8WZ59 177 aa11.38□□□□□ -0.59
PRKCB-201ENST00000303531 MINOS1-NBL1R4GNA1 71 aa11.38□□□□□ -0.59
PRKCB-201ENST00000303531 SH2D1AO60880 128 aa11.38□□□□□ -0.59
PRKCB-201ENST00000303531 NDPQ00604 133 aa11.38□□□□□ -0.59
PRKCB-201ENST00000303531 ZSWIM8A7E2V4 1837 aa11.38□□□□□ -0.59
PRKCB-201ENST00000303531 C1orf194Q5T5A4 169 aa11.38□□□□□ -0.59
PRKCB-201ENST00000303531 TMEM8BA6NDV4 472 aa11.37□□□□□ -0.59
PRKCB-201ENST00000303531 SIGLEC9Q9Y336 463 aa11.37□□□□□ -0.59
PRKCB-201ENST00000303531 TRAV8-1A0A0A6YYK1 113 aa11.37□□□□□ -0.59
PRKCB-201ENST00000303531 SAMD5Q5TGI4 173 aa11.37□□□□□ -0.59
PRKCB-201ENST00000303531 DEFB104AQ8WTQ1 72 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms