RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 MCRIP2Q9BUT9 160 aaKnown RBP11.56□□□□□ -0.56
UBXN1-202ENST00000301935 DNAJC4Q9NNZ3 241 aa11.56□□□□□ -0.56
UBXN1-202ENST00000301935 TENM3Q9P273 2699 aa11.56□□□□□ -0.56
UBXN1-202ENST00000301935 PPP5D1E7EU14 171 aa11.55□□□□□ -0.56
UBXN1-202ENST00000301935 HYPMO75409 117 aa11.55□□□□□ -0.56
UBXN1-202ENST00000301935 M6PRP20645 277 aa11.55□□□□□ -0.56
UBXN1-202ENST00000301935 ELLP55199 621 aaPredicted RBP11.55□□□□□ -0.56
UBXN1-202ENST00000301935 TEX261Q6UWH6 196 aa11.55□□□□□ -0.56
UBXN1-202ENST00000301935 DPPA3Q6W0C5 159 aa11.55□□□□□ -0.56
UBXN1-202ENST00000301935 OR11H1Q8NG94 326 aa11.55□□□□□ -0.56
UBXN1-202ENST00000301935 RNF125Q96EQ8 232 aa11.55□□□□□ -0.56
UBXN1-202ENST00000301935 PUS1Q9Y606 427 aaKnown RBP eCLIP11.55□□□□□ -0.56
UBXN1-202ENST00000301935 K7EMT4 169 aa11.54□□□□□ -0.56
UBXN1-202ENST00000301935 CCL24O00175 119 aa11.54□□□□□ -0.56
UBXN1-202ENST00000301935 LGALS9O00182 355 aa11.54□□□□□ -0.56
UBXN1-202ENST00000301935 YIF1AO95070 293 aa11.54□□□□□ -0.56
UBXN1-202ENST00000301935 TRBV12-3P01733 135 aa11.54□□□□□ -0.56
UBXN1-202ENST00000301935 IL4P05112 153 aa11.54□□□□□ -0.56
UBXN1-202ENST00000301935 MYCNOSP40205 109 aa11.54□□□□□ -0.56
UBXN1-202ENST00000301935 TMEM41BQ5BJD5 291 aa11.54□□□□□ -0.56
UBXN1-202ENST00000301935 TOMM20LQ6UXN7 152 aa11.54□□□□□ -0.56
UBXN1-202ENST00000301935 LRRC20Q8TCA0 184 aa11.54□□□□□ -0.56
UBXN1-202ENST00000301935 TMED6Q8WW62 240 aa11.54□□□□□ -0.56
UBXN1-202ENST00000301935 SH3BGRL3Q9H299 93 aa11.54□□□□□ -0.56
UBXN1-202ENST00000301935 UFC1Q9Y3C8 167 aa11.54□□□□□ -0.56
UBXN1-202ENST00000301935 IGHV4OR15-8A0A075B7B6 117 aa11.53□□□□□ -0.56
UBXN1-202ENST00000301935 A0A087WW49 117 aa11.53□□□□□ -0.56
UBXN1-202ENST00000301935 COX7A2P2O60397 106 aa11.53□□□□□ -0.56
UBXN1-202ENST00000301935 LYZP61626 148 aa11.53□□□□□ -0.56
UBXN1-202ENST00000301935 FHL3Q13643 280 aa11.53□□□□□ -0.56
UBXN1-202ENST00000301935 KLF5Q13887 457 aaPredicted RBP11.53□□□□□ -0.56
UBXN1-202ENST00000301935 C8orf86Q6ZUL3 223 aa11.53□□□□□ -0.56
UBXN1-202ENST00000301935 NARS2Q96I59 477 aaKnown RBP11.53□□□□□ -0.56
UBXN1-202ENST00000301935 MRPL27Q9P0M9 148 aaKnown RBP11.53□□□□□ -0.56
UBXN1-202ENST00000301935 RABAC1Q9UI14 185 aa11.53□□□□□ -0.56
UBXN1-202ENST00000301935 HIGD1AQ9Y241 93 aa11.53□□□□□ -0.56
UBXN1-202ENST00000301935 A0A1W2PPV4 95 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 ORM2P19652 201 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 NPPCP23582 126 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 GATA2P23769 480 aaPredicted RBP11.52□□□□□ -0.57
UBXN1-202ENST00000301935 BMI1P35226 326 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 SULT1A2P50226 295 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 RHOBP62745 196 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 C10orf113Q5VZT2 155 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 TMEM182Q6ZP80 229 aaPredicted RBP11.52□□□□□ -0.57
UBXN1-202ENST00000301935 C18orf65Q6ZTR6 163 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 ZNF767PQ75MW2 155 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 ZNF680Q8NEM1 530 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 OR10G4Q8NGN3 311 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 OR10G9Q8NGN4 311 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 OR10G7Q8NGN6 311 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 OR1B1Q8NGR6 318 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 RNF141Q8WVD5 230 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 TMEM190Q8WZ59 177 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 RAX2Q96IS3 184 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 METTL26Q96S19 204 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 MRPL32Q9BYC8 188 aaKnown RBP11.52□□□□□ -0.57
UBXN1-202ENST00000301935 ZFAND3Q9H8U3 227 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 PEMTQ9UBM1 199 aa11.52□□□□□ -0.57
UBXN1-202ENST00000301935 OR5G3P0C626 314 aa11.51□□□□□ -0.57
UBXN1-202ENST00000301935 ALKAL2Q6UX46 152 aa11.51□□□□□ -0.57
UBXN1-202ENST00000301935 MARC2Q969Z3 335 aa11.51□□□□□ -0.57
UBXN1-202ENST00000301935 PBDC1Q9BVG4 233 aa11.51□□□□□ -0.57
UBXN1-202ENST00000301935 ACTR3CQ9C0K3 210 aaPredicted RBP11.51□□□□□ -0.57
UBXN1-202ENST00000301935 DAZ1Q9NQZ3 744 aaKnown RBP11.51□□□□□ -0.57
UBXN1-202ENST00000301935 ZMAT5Q9UDW3 170 aaKnown RBP11.51□□□□□ -0.57
UBXN1-202ENST00000301935 UBQLN2Q9UHD9 624 aa11.51□□□□□ -0.57
UBXN1-202ENST00000301935 IGHV3-35A0A0C4DH35 117 aa11.5□□□□□ -0.57
UBXN1-202ENST00000301935 A0A1W2PS18 150 aa11.5□□□□□ -0.57
UBXN1-202ENST00000301935 ZNF320A2RRD8 509 aa11.5□□□□□ -0.57
UBXN1-202ENST00000301935 A8MWP6 167 aa11.5□□□□□ -0.57
UBXN1-202ENST00000301935 SEC14L6B5MCN3 397 aa11.5□□□□□ -0.57
UBXN1-202ENST00000301935 NHLRC4P0CG21 123 aaPredicted RBP11.5□□□□□ -0.57
UBXN1-202ENST00000301935 CRYBB3P26998 211 aa11.5□□□□□ -0.57
UBXN1-202ENST00000301935 TAS2R45P59539 299 aa11.5□□□□□ -0.57
UBXN1-202ENST00000301935 BLOC1S1P78537 153 aa11.5□□□□□ -0.57
UBXN1-202ENST00000301935 C1orf194Q5T5A4 169 aa11.5□□□□□ -0.57
UBXN1-202ENST00000301935 SAT2Q96F10 170 aaPredicted RBP11.5□□□□□ -0.57
UBXN1-202ENST00000301935 C20orf24Q9BUV8 137 aa11.5□□□□□ -0.57
UBXN1-202ENST00000301935 TMEM231Q9H6L2 316 aa11.5□□□□□ -0.57
UBXN1-202ENST00000301935 RPRMQ9NS64 109 aa11.5□□□□□ -0.57
UBXN1-202ENST00000301935 U3KQK5 164 aa11.5□□□□□ -0.57
UBXN1-202ENST00000301935 RYR2Q92736 4967 aa11.49□□□□□ -0.57
UBXN1-202ENST00000301935 TEX46H3BTG2 121 aa11.49□□□□□ -0.57
UBXN1-202ENST00000301935 USF2Q15853 346 aaPredicted RBP11.49□□□□□ -0.57
UBXN1-202ENST00000301935 DEFB136Q30KP8 78 aa11.49□□□□□ -0.57
UBXN1-202ENST00000301935 FAM78BQ5VT40 261 aa11.49□□□□□ -0.57
UBXN1-202ENST00000301935 PATE2Q6UY27 113 aa11.49□□□□□ -0.57
UBXN1-202ENST00000301935 LINC00305Q7Z4B0 112 aa11.49□□□□□ -0.57
UBXN1-202ENST00000301935 STXBP6Q8NFX7 210 aa11.49□□□□□ -0.57
UBXN1-202ENST00000301935 TMEM37Q8WXS4 190 aa11.49□□□□□ -0.57
UBXN1-202ENST00000301935 GRAMD2BQ96HH9 432 aa11.49□□□□□ -0.57
UBXN1-202ENST00000301935 ZNF414Q96IQ9 312 aa11.49□□□□□ -0.57
UBXN1-202ENST00000301935 GPR82Q96P67 336 aa11.49□□□□□ -0.57
UBXN1-202ENST00000301935 FUT9Q9Y231 359 aa11.49□□□□□ -0.57
UBXN1-202ENST00000301935 RFNGQ9Y644 331 aa11.49□□□□□ -0.57
UBXN1-202ENST00000301935 CTXND1A0A1B0GTU2 59 aa11.48□□□□□ -0.57
UBXN1-202ENST00000301935 CD5P06127 495 aa11.48□□□□□ -0.57
UBXN1-202ENST00000301935 CDC34P49427 236 aaPredicted RBP11.48□□□□□ -0.57
UBXN1-202ENST00000301935 SYNJ2BPP57105 145 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms