RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 LINC01545Q5VT33 79 aa8.86□□□□□ -0.99
SNX20-201ENST00000300590 MOGAT3Q86VF5 341 aa8.86□□□□□ -0.99
SNX20-201ENST00000300590 VSTM2AQ8TAG5 236 aa8.86□□□□□ -0.99
SNX20-201ENST00000300590 PPP1R35Q8TAP8 253 aa8.86□□□□□ -0.99
SNX20-201ENST00000300590 ZNF747Q9BV97 191 aa8.86□□□□□ -0.99
SNX20-201ENST00000300590 C19orf24Q9BVV8 132 aa8.86□□□□□ -0.99
SNX20-201ENST00000300590 MRPL32Q9BYC8 188 aaKnown RBP8.86□□□□□ -0.99
SNX20-201ENST00000300590 TTTY13Q9BZ97 58 aa8.86□□□□□ -0.99
SNX20-201ENST00000300590 TMSB15BA0A087X1C1 80 aa8.86□□□□□ -0.99
SNX20-201ENST00000300590 H3BRM9 83 aa8.86□□□□□ -0.99
SNX20-201ENST00000300590 ARMS2P0C7Q2 107 aa8.86□□□□□ -0.99
SNX20-201ENST00000300590 IFI27P40305 119 aaPredicted RBP8.86□□□□□ -0.99
SNX20-201ENST00000300590 CSN1S1P47710 185 aa8.86□□□□□ -0.99
SNX20-201ENST00000300590 CXCL12P48061 93 aa8.86□□□□□ -0.99
SNX20-201ENST00000300590 MEOX1P50221 254 aa8.86□□□□□ -0.99
SNX20-201ENST00000300590 MTURNQ8N3F0 131 aa8.86□□□□□ -0.99
SNX20-201ENST00000300590 SRSF12Q8WXF0 261 aaKnown RBP8.86□□□□□ -0.99
SNX20-201ENST00000300590 SPRY3O43610 288 aa8.85□□□□□ -0.99
SNX20-201ENST00000300590 FAM87AP0C7U9 286 aa8.85□□□□□ -0.99
SNX20-201ENST00000300590 HCP5Q6MZN7 132 aa8.85□□□□□ -0.99
SNX20-201ENST00000300590 ITLN1Q8WWA0 313 aa8.85□□□□□ -0.99
SNX20-201ENST00000300590 ZNF48Q96MX3 618 aaPredicted RBP8.85□□□□□ -0.99
SNX20-201ENST00000300590 NPFFR1Q9GZQ6 430 aa8.85□□□□□ -0.99
SNX20-201ENST00000300590 C7orf69Q9H7B7 122 aa8.85□□□□□ -0.99
SNX20-201ENST00000300590 C1RLQ9NZP8 487 aa8.85□□□□□ -0.99
SNX20-201ENST00000300590 MRPS17Q9Y2R5 130 aaKnown RBP8.85□□□□□ -0.99
SNX20-201ENST00000300590 PKDREJQ9NTG1 2253 aa8.85□□□□□ -0.99
SNX20-201ENST00000300590 A0A1W2PRD5 423 aa8.85□□□□□ -0.99
SNX20-201ENST00000300590 A0A1W2PRF3 423 aa8.85□□□□□ -0.99
SNX20-201ENST00000300590 A0A1W2PRM7 423 aa8.85□□□□□ -0.99
SNX20-201ENST00000300590 FNDC10F2Z333 226 aa8.85□□□□□ -0.99
SNX20-201ENST00000300590 PPIAL4EA0A075B759 164 aa8.85□□□□□ -0.99
SNX20-201ENST00000300590 PPIAL4FP0DN26 164 aa8.85□□□□□ -0.99
SNX20-201ENST00000300590 CFHR2P36980 270 aa8.85□□□□□ -0.99
SNX20-201ENST00000300590 C2orf83Q53S99 150 aa8.85□□□□□ -0.99
SNX20-201ENST00000300590 HARBI1Q96MB7 349 aa8.85□□□□□ -0.99
SNX20-201ENST00000300590 PSMB11A5LHX3 300 aa8.84□□□□□ -0.99
SNX20-201ENST00000300590 C9orf172C9J069 976 aa8.84□□□□□ -0.99
SNX20-201ENST00000300590 K7ERJ3 54 aa8.84□□□□□ -0.99
SNX20-201ENST00000300590 TIMM23BQ5SRD1 257 aa8.84□□□□□ -0.99
SNX20-201ENST00000300590 GOLT1AQ6ZVE7 132 aa8.84□□□□□ -0.99
SNX20-201ENST00000300590 OR1L4Q8NGR5 311 aa8.84□□□□□ -0.99
SNX20-201ENST00000300590 CACNA1GO43497 2377 aa8.84□□□□□ -0.99
SNX20-201ENST00000300590 A0A1W2PPM0 123 aa8.84□□□□□ -0.99
SNX20-201ENST00000300590 GAGE12HA6NDE8 117 aa8.84□□□□□ -0.99
SNX20-201ENST00000300590 C17orf58Q2M2W7 97 aa8.84□□□□□ -0.99
SNX20-201ENST00000300590 RUSC1-AS1Q66K80 236 aa8.84□□□□□ -0.99
SNX20-201ENST00000300590 EXOC3-AS1Q8N2X6 119 aa8.84□□□□□ -0.99
SNX20-201ENST00000300590 GCSAMQ8N6F7 178 aa8.84□□□□□ -0.99
SNX20-201ENST00000300590 C18orf15Q96N68 181 aa8.84□□□□□ -0.99
SNX20-201ENST00000300590 NDFIP1Q9BT67 221 aa8.84□□□□□ -0.99
SNX20-201ENST00000300590 DLL1O00548 723 aa8.83□□□□□ -1
SNX20-201ENST00000300590 CT45A6P0DMU7 189 aa8.83□□□□□ -1
SNX20-201ENST00000300590 CT45A5P0DMU8 189 aa8.83□□□□□ -1
SNX20-201ENST00000300590 CT45A7P0DMV0 189 aa8.83□□□□□ -1
SNX20-201ENST00000300590 C6orf15Q6UXA7 325 aaPredicted RBP8.83□□□□□ -1
SNX20-201ENST00000300590 TMEM105Q8N8V8 129 aa8.83□□□□□ -1
SNX20-201ENST00000300590 GEMIN7Q9H840 131 aaKnown RBP8.83□□□□□ -1
SNX20-201ENST00000300590 PLSCR4Q9NRQ2 329 aa8.83□□□□□ -1
SNX20-201ENST00000300590 SSUH2Q9Y2M2 353 aa8.83□□□□□ -1
SNX20-201ENST00000300590 BOD1L1Q8NFC6 3051 aa8.83□□□□□ -1
SNX20-201ENST00000300590 DSCAMO60469 2012 aa8.83□□□□□ -1
SNX20-201ENST00000300590 CECR9P0C854 216 aa8.83□□□□□ -1
SNX20-201ENST00000300590 SAMD5Q5TGI4 173 aa8.83□□□□□ -1
SNX20-201ENST00000300590 NEGR1Q7Z3B1 354 aa8.83□□□□□ -1
SNX20-201ENST00000300590 Q9H3A6 140 aa8.83□□□□□ -1
SNX20-201ENST00000300590 INO80CQ6PI98 192 aaPredicted RBP8.83□□□□□ -1
SNX20-201ENST00000300590 F2RL2O00254 374 aa8.82□□□□□ -1
SNX20-201ENST00000300590 FGF6P10767 208 aa8.82□□□□□ -1
SNX20-201ENST00000300590 FCGR2BP31994 310 aaPredicted RBP8.82□□□□□ -1
SNX20-201ENST00000300590 WT1-ASQ06250 92 aa8.82□□□□□ -1
SNX20-201ENST00000300590 PSG3Q16557 428 aa8.82□□□□□ -1
SNX20-201ENST00000300590 RNFT1Q5M7Z0 435 aa8.82□□□□□ -1
SNX20-201ENST00000300590 ZADH2Q8N4Q0 377 aa8.82□□□□□ -1
SNX20-201ENST00000300590 SMG1Q96Q15 3661 aaKnown RBP8.82□□□□□ -1
SNX20-201ENST00000300590 A0A1B0GUT8 65 aa8.82□□□□□ -1
SNX20-201ENST00000300590 TCRBV4S1A1TA0A5B7 111 aa8.82□□□□□ -1
SNX20-201ENST00000300590 SMAD7O15105 426 aaKnown RBP8.82□□□□□ -1
SNX20-201ENST00000300590 TCRAP04437 139 aa8.82□□□□□ -1
SNX20-201ENST00000300590 LPAL2Q16609 132 aa8.82□□□□□ -1
SNX20-201ENST00000300590 CCL13Q99616 98 aa8.82□□□□□ -1
SNX20-201ENST00000300590 MLST8Q9BVC4 326 aa8.82□□□□□ -1
SNX20-201ENST00000300590 PRSS22Q9GZN4 317 aa8.82□□□□□ -1
SNX20-201ENST00000300590 SPRR3Q9UBC9 169 aa8.82□□□□□ -1
SNX20-201ENST00000300590 TRGV5A0A0B4J1U4 118 aa8.82□□□□□ -1
SNX20-201ENST00000300590 KBTBD11-OT1A0A1B0GTJ5 212 aa8.82□□□□□ -1
SNX20-201ENST00000300590 ADAMTSL5Q6ZMM2 481 aa8.82□□□□□ -1
SNX20-201ENST00000300590 OR1L8Q8NGR8 309 aa8.82□□□□□ -1
SNX20-201ENST00000300590 INSIG2Q9Y5U4 225 aa8.82□□□□□ -1
SNX20-201ENST00000300590 OR5A1Q8NGJ0 315 aa8.81□□□□□ -1
SNX20-201ENST00000300590 ZNF714Q96N38 554 aa8.81□□□□□ -1
SNX20-201ENST00000300590 MRPL20Q9BYC9 149 aaKnown RBP8.81□□□□□ -1
SNX20-201ENST00000300590 WNK2Q9Y3S1 2297 aa8.81□□□□□ -1
SNX20-201ENST00000300590 KALRNO60229 2985 aa8.81□□□□□ -1
SNX20-201ENST00000300590 C19orf71A6NCJ1 209 aa8.81□□□□□ -1
SNX20-201ENST00000300590 SRRM5B3KS81 715 aa8.81□□□□□ -1
SNX20-201ENST00000300590 SMKR1H3BMG3 65 aa8.81□□□□□ -1
SNX20-201ENST00000300590 NKX2-8O15522 239 aa8.81□□□□□ -1
SNX20-201ENST00000300590 BCL6BQ8N143 479 aaPredicted RBP8.81□□□□□ -1
SNX20-201ENST00000300590 PIP4P2Q8N4L2 257 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms