RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 SLC25A33Q9BSK2 321 aa10.87□□□□□ -0.67
CTDP1-202ENST00000299543 ATRXP46100 2492 aa10.87□□□□□ -0.67
CTDP1-202ENST00000299543 C17orf100A8MU93 164 aa10.86□□□□□ -0.67
CTDP1-202ENST00000299543 NDUFB3O43676 98 aa10.86□□□□□ -0.67
CTDP1-202ENST00000299543 Q0VG73 95 aa10.86□□□□□ -0.67
CTDP1-202ENST00000299543 ADIPOQQ15848 244 aa10.86□□□□□ -0.67
CTDP1-202ENST00000299543 OR5B3Q8NH48 314 aa10.86□□□□□ -0.67
CTDP1-202ENST00000299543 FAM168AQ92567 244 aa10.86□□□□□ -0.67
CTDP1-202ENST00000299543 SFXN3Q9BWM7 321 aa10.86□□□□□ -0.67
CTDP1-202ENST00000299543 TPSG1Q9NRR2 321 aa10.86□□□□□ -0.67
CTDP1-202ENST00000299543 THYN1Q9P016 225 aa10.86□□□□□ -0.67
CTDP1-202ENST00000299543 CDC42EP3Q9UKI2 254 aa10.86□□□□□ -0.67
CTDP1-202ENST00000299543 LINC00312Q9Y6C7 94 aa10.86□□□□□ -0.67
CTDP1-202ENST00000299543 GNG5P63218 68 aa10.86□□□□□ -0.67
CTDP1-202ENST00000299543 Q6ZS92 163 aa10.86□□□□□ -0.67
CTDP1-202ENST00000299543 CUL9Q8IWT3 2517 aa10.86□□□□□ -0.67
CTDP1-202ENST00000299543 FAM231BA6NCW3 169 aa10.86□□□□□ -0.67
CTDP1-202ENST00000299543 H0YJW9 148 aa10.86□□□□□ -0.67
CTDP1-202ENST00000299543 RITA1Q96K30 269 aa10.86□□□□□ -0.67
CTDP1-202ENST00000299543 PAXXQ9BUH6 204 aa10.86□□□□□ -0.67
CTDP1-202ENST00000299543 ZNF257Q9Y2Q1 563 aa10.86□□□□□ -0.67
CTDP1-202ENST00000299543 RAI1Q7Z5J4 1906 aaPredicted RBP10.85□□□□□ -0.67
CTDP1-202ENST00000299543 A0A0G2JNJ9 132 aa10.85□□□□□ -0.67
CTDP1-202ENST00000299543 C9JCJ5 164 aa10.85□□□□□ -0.67
CTDP1-202ENST00000299543 TM4SF5O14894 197 aa10.85□□□□□ -0.67
CTDP1-202ENST00000299543 WT1-ASQ06250 92 aa10.85□□□□□ -0.67
CTDP1-202ENST00000299543 SLAQ13239 276 aa10.85□□□□□ -0.67
CTDP1-202ENST00000299543 C2orf83Q53S99 150 aa10.85□□□□□ -0.67
CTDP1-202ENST00000299543 C10orf113Q5VZT2 155 aa10.85□□□□□ -0.67
CTDP1-202ENST00000299543 Q9UFV3 132 aa10.85□□□□□ -0.67
CTDP1-202ENST00000299543 SSUH2Q9Y2M2 353 aa10.85□□□□□ -0.67
CTDP1-202ENST00000299543 ZNF835Q9Y2P0 537 aa10.85□□□□□ -0.67
CTDP1-202ENST00000299543 AMMECR1Q9Y4X0 333 aaPredicted RBP10.85□□□□□ -0.67
CTDP1-202ENST00000299543 LYNX1G3V0Z9 82 aa10.85□□□□□ -0.67
CTDP1-202ENST00000299543 DLL1O00548 723 aa10.85□□□□□ -0.67
CTDP1-202ENST00000299543 LYNX1P0DP58 116 aa10.85□□□□□ -0.67
CTDP1-202ENST00000299543 C11orf52Q96A22 123 aa10.85□□□□□ -0.67
CTDP1-202ENST00000299543 MRPL36Q9P0J6 103 aaKnown RBP10.85□□□□□ -0.67
CTDP1-202ENST00000299543 ANKHD1Q8IWZ3 2542 aaKnown RBP10.85□□□□□ -0.67
CTDP1-202ENST00000299543 PAX2Q02962 417 aa10.85□□□□□ -0.67
CTDP1-202ENST00000299543 OR4C13Q8NGP0 309 aa10.85□□□□□ -0.67
CTDP1-202ENST00000299543 OSR1Q8TAX0 266 aaPredicted RBP10.85□□□□□ -0.67
CTDP1-202ENST00000299543 PEF1Q9UBV8 284 aaKnown RBP10.85□□□□□ -0.67
CTDP1-202ENST00000299543 C12orf54Q6X4T0 127 aa10.84□□□□□ -0.67
CTDP1-202ENST00000299543 FAM57AQ8TBR7 257 aa10.84□□□□□ -0.67
CTDP1-202ENST00000299543 JMJD8Q96S16 334 aa10.84□□□□□ -0.67
CTDP1-202ENST00000299543 FAM181BA6NEQ2 426 aa10.84□□□□□ -0.67
CTDP1-202ENST00000299543 PPIAL4GP0DN37 164 aa10.84□□□□□ -0.67
CTDP1-202ENST00000299543 POU2AF1Q16633 256 aa10.84□□□□□ -0.67
CTDP1-202ENST00000299543 GFRALQ6UXV0 394 aa10.84□□□□□ -0.67
CTDP1-202ENST00000299543 TMEM136Q6ZRR5 245 aa10.84□□□□□ -0.67
CTDP1-202ENST00000299543 C5orf17Q8NAS9 161 aa10.84□□□□□ -0.67
CTDP1-202ENST00000299543 NDUFA4L2Q9NRX3 87 aa10.84□□□□□ -0.67
CTDP1-202ENST00000299543 CEACAM4O75871 244 aa10.83□□□□□ -0.67
CTDP1-202ENST00000299543 ZNF137PP52743 207 aa10.83□□□□□ -0.67
CTDP1-202ENST00000299543 PNKDQ8N490 385 aa10.83□□□□□ -0.67
CTDP1-202ENST00000299543 ABHD17AQ96GS6 310 aa10.83□□□□□ -0.67
CTDP1-202ENST00000299543 LINC00305Q7Z4B0 112 aa10.83□□□□□ -0.68
CTDP1-202ENST00000299543 ARHGAP32A7KAX9 2087 aa10.83□□□□□ -0.68
CTDP1-202ENST00000299543 IGF2RP11717 2491 aa10.83□□□□□ -0.68
CTDP1-202ENST00000299543 FCN3O75636 299 aa10.83□□□□□ -0.68
CTDP1-202ENST00000299543 SLC25A5P05141 298 aaKnown RBP10.83□□□□□ -0.68
CTDP1-202ENST00000299543 PERPQ96FX8 193 aa10.83□□□□□ -0.68
CTDP1-202ENST00000299543 SLC25A2Q9BXI2 301 aa10.83□□□□□ -0.68
CTDP1-202ENST00000299543 AZU1P20160 251 aa10.82□□□□□ -0.68
CTDP1-202ENST00000299543 COX7A1P24310 79 aa10.82□□□□□ -0.68
CTDP1-202ENST00000299543 ZNF138P52744 262 aa10.82□□□□□ -0.68
CTDP1-202ENST00000299543 SUB1P53999 127 aaKnown RBP eCLIP10.82□□□□□ -0.68
CTDP1-202ENST00000299543 WDR73Q6P4I2 378 aa10.82□□□□□ -0.68
CTDP1-202ENST00000299543 CSMD1Q96PZ7 3565 aa10.82□□□□□ -0.68
CTDP1-202ENST00000299543 ISLRO14498 428 aa10.82□□□□□ -0.68
CTDP1-202ENST00000299543 CNTFRP26992 372 aa10.82□□□□□ -0.68
CTDP1-202ENST00000299543 CX3CL1P78423 397 aa10.82□□□□□ -0.68
CTDP1-202ENST00000299543 ZNF833PQ6ZTB9 187 aa10.82□□□□□ -0.68
CTDP1-202ENST00000299543 DEFB125Q8N687 156 aa10.82□□□□□ -0.68
CTDP1-202ENST00000299543 OR4A5Q8NH83 315 aa10.82□□□□□ -0.68
CTDP1-202ENST00000299543 TMEM70Q9BUB7 260 aa10.82□□□□□ -0.68
CTDP1-202ENST00000299543 MRPL27Q9P0M9 148 aaKnown RBP10.82□□□□□ -0.68
CTDP1-202ENST00000299543 PGPA6NDG6 321 aa10.82□□□□□ -0.68
CTDP1-202ENST00000299543 IGLC1P0CG04 106 aa10.82□□□□□ -0.68
CTDP1-202ENST00000299543 RUSC1-AS1Q66K80 236 aa10.82□□□□□ -0.68
CTDP1-202ENST00000299543 C18orf32Q8TCD1 76 aa10.82□□□□□ -0.68
CTDP1-202ENST00000299543 PTPRQQ9UMZ3 2332 aa10.81□□□□□ -0.68
CTDP1-202ENST00000299543 A0A1W2PRE2 83 aa10.81□□□□□ -0.68
CTDP1-202ENST00000299543 TMEM178BH3BS89 294 aa10.81□□□□□ -0.68
CTDP1-202ENST00000299543 ZZEF1O43149 2961 aa10.81□□□□□ -0.68
CTDP1-202ENST00000299543 CEACAM3P40198 252 aa10.81□□□□□ -0.68
CTDP1-202ENST00000299543 MEF2CQ06413 473 aaPredicted RBP10.81□□□□□ -0.68
CTDP1-202ENST00000299543 VMA21Q3ZAQ7 101 aa10.81□□□□□ -0.68
CTDP1-202ENST00000299543 TEX36Q5VZQ5 186 aa10.81□□□□□ -0.68
CTDP1-202ENST00000299543 OSTCQ9NRP0 149 aa10.81□□□□□ -0.68
CTDP1-202ENST00000299543 TNFRSF19Q9NS68 423 aa10.81□□□□□ -0.68
CTDP1-202ENST00000299543 HTR1DP28221 377 aa10.81□□□□□ -0.68
CTDP1-202ENST00000299543 SCGB2A2Q13296 93 aa10.81□□□□□ -0.68
CTDP1-202ENST00000299543 PATE2Q6UY27 113 aa10.81□□□□□ -0.68
CTDP1-202ENST00000299543 OR5AN1Q8NGI8 311 aa10.81□□□□□ -0.68
CTDP1-202ENST00000299543 VSTM2AQ8TAG5 236 aa10.81□□□□□ -0.68
CTDP1-202ENST00000299543 FAM167A-AS1Q96KT0 104 aa10.81□□□□□ -0.68
CTDP1-202ENST00000299543 GNB1LQ9BYB4 327 aa10.81□□□□□ -0.68
CTDP1-202ENST00000299543 CTSZQ9UBR2 303 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms