RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 FOXA2Q9Y261 457 aaPredicted RBP8.16□□□□□ -1.1
FOXN4-201ENST00000299162 PPIAL4CA0A0B4J2A2 164 aa8.15□□□□□ -1.1
FOXN4-201ENST00000299162 OR2T8A6NH00 312 aa8.15□□□□□ -1.1
FOXN4-201ENST00000299162 M0R2Z0 102 aa8.15□□□□□ -1.1
FOXN4-201ENST00000299162 MORN5Q5VZ52 161 aa8.15□□□□□ -1.1
FOXN4-201ENST00000299162 CSPG4Q6UVK1 2322 aa8.15□□□□□ -1.1
FOXN4-201ENST00000299162 GAGE12BA1L429 117 aa8.15□□□□□ -1.1
FOXN4-201ENST00000299162 K7EN84 100 aa8.15□□□□□ -1.1
FOXN4-201ENST00000299162 NDUFS7O75251 213 aa8.15□□□□□ -1.1
FOXN4-201ENST00000299162 NUDT3O95989 172 aa8.15□□□□□ -1.1
FOXN4-201ENST00000299162 GCHFRP30047 84 aa8.15□□□□□ -1.1
FOXN4-201ENST00000299162 ERHP84090 104 aaKnown RBP8.15□□□□□ -1.1
FOXN4-201ENST00000299162 RHOGP84095 191 aa8.15□□□□□ -1.1
FOXN4-201ENST00000299162 VPS13CQ709C8 3753 aa8.15□□□□□ -1.11
FOXN4-201ENST00000299162 TLN2Q9Y4G6 2542 aa8.15□□□□□ -1.11
FOXN4-201ENST00000299162 A0A1W2PS18 150 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 CD99P14209 185 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 CTRLP40313 264 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 UQCRFS1P47985 274 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 GNG4P50150 75 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 RHOBP62745 196 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 PRCDQ00LT1 54 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 WT1-ASQ06250 92 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 KLRD1Q13241 179 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 HES1Q14469 280 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 AMMECR1LQ6DCA0 310 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 TMEM144Q7Z5S9 345 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 PNKDQ8N490 385 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 KLHDC1Q8N7A1 406 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 BLNKQ8WV28 456 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 VKORC1Q9BQB6 163 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 CLEC7AQ9BXN2 247 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 INSIG2Q9Y5U4 225 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 USP9YO00507 2555 aaPredicted RBP8.14□□□□□ -1.11
FOXN4-201ENST00000299162 IGHV1-8P0DP01 117 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 PYYP10082 97 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 AREGP15514 252 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 FOXA3P55318 350 aaPredicted RBP8.14□□□□□ -1.11
FOXN4-201ENST00000299162 RUSC1-AS1Q66K80 236 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 NIT1Q86X76 327 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 OR4C13Q8NGP0 309 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 LINC00479Q96M42 142 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 FBXL15Q9H469 300 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 MRPL36Q9P0J6 103 aaKnown RBP8.14□□□□□ -1.11
FOXN4-201ENST00000299162 SMPXQ9UHP9 88 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 UTP20O75691 2785 aaKnown RBP8.14□□□□□ -1.11
FOXN4-201ENST00000299162 FLNCQ14315 2725 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 PRSS46E5RG02 174 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 CXorf1O96002 111 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 RAB9AP51151 201 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 FOXL1Q12952 345 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 VWC2Q2TAL6 325 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 CENPVQ7Z7K6 275 aaPredicted RBP8.14□□□□□ -1.11
FOXN4-201ENST00000299162 OR1L8Q8NGR8 309 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 IL36BQ9NZH7 164 aa8.14□□□□□ -1.11
FOXN4-201ENST00000299162 LINC00869P0C866 280 aa8.13□□□□□ -1.11
FOXN4-201ENST00000299162 USF1P22415 310 aaPredicted RBP8.13□□□□□ -1.11
FOXN4-201ENST00000299162 CENPWQ5EE01 88 aa8.13□□□□□ -1.11
FOXN4-201ENST00000299162 OR52E5Q8NH55 327 aa8.13□□□□□ -1.11
FOXN4-201ENST00000299162 CCDC168Q8NDH2 2452 aa8.13□□□□□ -1.11
FOXN4-201ENST00000299162 hDV102S1A0JD36 115 aa8.13□□□□□ -1.11
FOXN4-201ENST00000299162 ZNF324O75467 553 aaPredicted RBP8.13□□□□□ -1.11
FOXN4-201ENST00000299162 CSN3P07498 182 aa8.13□□□□□ -1.11
FOXN4-201ENST00000299162 STAG3L2P0CL84 134 aa8.13□□□□□ -1.11
FOXN4-201ENST00000299162 RNASE2P10153 161 aaKnown RBP8.13□□□□□ -1.11
FOXN4-201ENST00000299162 SMAGPQ0VAQ4 97 aa8.13□□□□□ -1.11
FOXN4-201ENST00000299162 ZNF672Q499Z4 452 aaPredicted RBP8.13□□□□□ -1.11
FOXN4-201ENST00000299162 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.13□□□□□ -1.11
FOXN4-201ENST00000299162 RPEQ96AT9 228 aa8.13□□□□□ -1.11
FOXN4-201ENST00000299162 FNDC4Q9H6D8 234 aaPredicted RBP8.13□□□□□ -1.11
FOXN4-201ENST00000299162 ZNF331Q9NQX6 463 aaPredicted RBP8.13□□□□□ -1.11
FOXN4-201ENST00000299162 ZNF835Q9Y2P0 537 aa8.13□□□□□ -1.11
FOXN4-201ENST00000299162 CNIH1O95406 144 aa8.13□□□□□ -1.11
FOXN4-201ENST00000299162 CA7P43166 264 aa8.13□□□□□ -1.11
FOXN4-201ENST00000299162 PPOXP50336 477 aa8.13□□□□□ -1.11
FOXN4-201ENST00000299162 OR8B2Q96RD0 313 aa8.13□□□□□ -1.11
FOXN4-201ENST00000299162 GTSF1LQ9H1H1 148 aa8.13□□□□□ -1.11
FOXN4-201ENST00000299162 MSRB2Q9Y3D2 182 aa8.13□□□□□ -1.11
FOXN4-201ENST00000299162 ZFHX3Q15911 3703 aa8.13□□□□□ -1.11
FOXN4-201ENST00000299162 MPDU1O75352 247 aa8.12□□□□□ -1.11
FOXN4-201ENST00000299162 ZNF137PP52743 207 aa8.12□□□□□ -1.11
FOXN4-201ENST00000299162 MFAP2P55001 183 aa8.12□□□□□ -1.11
FOXN4-201ENST00000299162 C3orf36Q3SXR2 165 aa8.12□□□□□ -1.11
FOXN4-201ENST00000299162 ZNF833PQ6ZTB9 187 aa8.12□□□□□ -1.11
FOXN4-201ENST00000299162 Q8N976 141 aa8.12□□□□□ -1.11
FOXN4-201ENST00000299162 OR1B1Q8NGR6 318 aa8.12□□□□□ -1.11
FOXN4-201ENST00000299162 KCNS1Q96KK3 526 aa8.12□□□□□ -1.11
FOXN4-201ENST00000299162 KCNIP2Q9NS61 270 aa8.12□□□□□ -1.11
FOXN4-201ENST00000299162 JKAMPQ9P055 326 aa8.12□□□□□ -1.11
FOXN4-201ENST00000299162 LSM4Q9Y4Z0 139 aaKnown RBP8.12□□□□□ -1.11
FOXN4-201ENST00000299162 HELTA6NFD8 242 aa8.12□□□□□ -1.11
FOXN4-201ENST00000299162 B9A039 149 aa8.12□□□□□ -1.11
FOXN4-201ENST00000299162 IGLL1P15814 213 aa8.12□□□□□ -1.11
FOXN4-201ENST00000299162 UBE2L3P68036 154 aaKnown RBP8.12□□□□□ -1.11
FOXN4-201ENST00000299162 MEF2CQ06413 473 aaPredicted RBP8.12□□□□□ -1.11
FOXN4-201ENST00000299162 TIGITQ495A1 244 aa8.12□□□□□ -1.11
FOXN4-201ENST00000299162 ZNF479Q96JC4 524 aa8.12□□□□□ -1.11
FOXN4-201ENST00000299162 TMEM133Q9H2Q1 129 aa8.12□□□□□ -1.11
FOXN4-201ENST00000299162 LRRK2Q5S007 2527 aa8.11□□□□□ -1.11
FOXN4-201ENST00000299162 IGHV2-26A0A0B4J1V2 119 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms