RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 NDUFB8O95169 186 aa16.15■□□□□ 0.18
SMCO4-201ENST00000298966 IGLC1P0CG04 106 aa16.15■□□□□ 0.18
SMCO4-201ENST00000298966 ZNF726P1Q15940 193 aa16.15■□□□□ 0.18
SMCO4-201ENST00000298966 MIC13Q5XKP0 118 aa16.15■□□□□ 0.18
SMCO4-201ENST00000298966 BPIFCQ8NFQ6 507 aa16.15■□□□□ 0.18
SMCO4-201ENST00000298966 OR1L4Q8NGR5 311 aa16.15■□□□□ 0.18
SMCO4-201ENST00000298966 NOL4LQ96MY1 436 aaPredicted RBP16.15■□□□□ 0.18
SMCO4-201ENST00000298966 RCHY1Q96PM5 261 aa16.15■□□□□ 0.18
SMCO4-201ENST00000298966 PFDN5Q99471 154 aa16.15■□□□□ 0.18
SMCO4-201ENST00000298966 MRPL36Q9P0J6 103 aaKnown RBP16.15■□□□□ 0.18
SMCO4-201ENST00000298966 IGHG4P01861 327 aa16.14■□□□□ 0.17
SMCO4-201ENST00000298966 LINC00869P0C866 280 aa16.14■□□□□ 0.17
SMCO4-201ENST00000298966 YPEL3P61236 119 aaPredicted RBP16.14■□□□□ 0.17
SMCO4-201ENST00000298966 ATP5G2Q06055 141 aa16.14■□□□□ 0.17
SMCO4-201ENST00000298966 C15orf32Q32M92 178 aa16.14■□□□□ 0.17
SMCO4-201ENST00000298966 S100A7AQ86SG5 101 aa16.14■□□□□ 0.17
SMCO4-201ENST00000298966 GATAD1Q8WUU5 269 aa16.14■□□□□ 0.17
SMCO4-201ENST00000298966 SFT2D1Q8WV19 159 aa16.14■□□□□ 0.17
SMCO4-201ENST00000298966 RAX2Q96IS3 184 aa16.14■□□□□ 0.17
SMCO4-201ENST00000298966 TRGV3P03979 118 aa16.13■□□□□ 0.17
SMCO4-201ENST00000298966 PLP1P60201 277 aa16.13■□□□□ 0.17
SMCO4-201ENST00000298966 RHOBP62745 196 aa16.13■□□□□ 0.17
SMCO4-201ENST00000298966 Q56UQ5 140 aa16.13■□□□□ 0.17
SMCO4-201ENST00000298966 ZNF502Q8TBZ5 544 aa16.13■□□□□ 0.17
SMCO4-201ENST00000298966 MRPL32Q9BYC8 188 aaKnown RBP16.13■□□□□ 0.17
SMCO4-201ENST00000298966 SORL1Q92673 2214 aa16.13■□□□□ 0.17
SMCO4-201ENST00000298966 ELOA3CA0A087WX78 387 aaPredicted RBP16.12■□□□□ 0.17
SMCO4-201ENST00000298966 A0A1W2PPV4 95 aa16.12■□□□□ 0.17
SMCO4-201ENST00000298966 MAP1LC3B2A6NCE7 125 aa16.12■□□□□ 0.17
SMCO4-201ENST00000298966 ELANEP08246 267 aa16.12■□□□□ 0.17
SMCO4-201ENST00000298966 S100A7P31151 101 aa16.12■□□□□ 0.17
SMCO4-201ENST00000298966 CDC34P49427 236 aaPredicted RBP16.12■□□□□ 0.17
SMCO4-201ENST00000298966 PMS2P11Q13670 270 aa16.12■□□□□ 0.17
SMCO4-201ENST00000298966 FAM210AQ96ND0 272 aa16.12■□□□□ 0.17
SMCO4-201ENST00000298966 MAP1LC3BQ9GZQ8 125 aa16.12■□□□□ 0.17
SMCO4-201ENST00000298966 LINC00527Q9UJ94 153 aa16.12■□□□□ 0.17
SMCO4-201ENST00000298966 ZNF256Q9Y2P7 627 aaPredicted RBP16.12■□□□□ 0.17
SMCO4-201ENST00000298966 SMAD5-AS1Q9Y6J3 95 aa16.12■□□□□ 0.17
SMCO4-201ENST00000298966 LYSTQ99698 3801 aa16.11■□□□□ 0.17
SMCO4-201ENST00000298966 IGHV3-21A0A0B4J1V1 117 aa16.11■□□□□ 0.17
SMCO4-201ENST00000298966 ANKRD34BA5PLL1 514 aa16.11■□□□□ 0.17
SMCO4-201ENST00000298966 NUPL2O15504 423 aaKnown RBP16.11■□□□□ 0.17
SMCO4-201ENST00000298966 TOMM40O96008 361 aa16.11■□□□□ 0.17
SMCO4-201ENST00000298966 IGHV3-48P01763 117 aa16.11■□□□□ 0.17
SMCO4-201ENST00000298966 TPPP2P59282 170 aa16.11■□□□□ 0.17
SMCO4-201ENST00000298966 FAM122CQ6P4D5 195 aa16.11■□□□□ 0.17
SMCO4-201ENST00000298966 TEX38Q6PEX7 206 aa16.11■□□□□ 0.17
SMCO4-201ENST00000298966 PBDC1Q9BVG4 233 aa16.11■□□□□ 0.17
SMCO4-201ENST00000298966 RNF24Q9Y225 148 aa16.11■□□□□ 0.17
SMCO4-201ENST00000298966 I3L521 148 aa16.1■□□□□ 0.17
SMCO4-201ENST00000298966 IGKV1-17P01599 117 aa16.1■□□□□ 0.17
SMCO4-201ENST00000298966 FOXE3Q13461 319 aa16.1■□□□□ 0.17
SMCO4-201ENST00000298966 SSX7Q7RTT5 188 aa16.1■□□□□ 0.17
SMCO4-201ENST00000298966 RAB24Q969Q5 203 aa16.1■□□□□ 0.17
SMCO4-201ENST00000298966 SLC25A22Q9H936 323 aa16.1■□□□□ 0.17
SMCO4-201ENST00000298966 KRBOX1C9JBD0 128 aa16.09■□□□□ 0.17
SMCO4-201ENST00000298966 F8W735 103 aaPredicted RBP16.09■□□□□ 0.17
SMCO4-201ENST00000298966 CD5P06127 495 aa16.09■□□□□ 0.17
SMCO4-201ENST00000298966 OR5G3P0C626 314 aa16.09■□□□□ 0.17
SMCO4-201ENST00000298966 RD3LP0DJH9 198 aa16.09■□□□□ 0.17
SMCO4-201ENST00000298966 PSMB8P28062 276 aa16.09■□□□□ 0.17
SMCO4-201ENST00000298966 ZNF90Q03938 601 aa16.09■□□□□ 0.17
SMCO4-201ENST00000298966 LCN15Q6UWW0 184 aa16.09■□□□□ 0.17
SMCO4-201ENST00000298966 RNF152Q8N8N0 203 aa16.09■□□□□ 0.17
SMCO4-201ENST00000298966 OR51G1Q8NGK1 321 aa16.09■□□□□ 0.17
SMCO4-201ENST00000298966 Q8WTZ3 238 aa16.09■□□□□ 0.17
SMCO4-201ENST00000298966 MS4A10Q96PG2 267 aa16.09■□□□□ 0.17
SMCO4-201ENST00000298966 SCRT1Q9BWW7 348 aa16.09■□□□□ 0.17
SMCO4-201ENST00000298966 SMDT1Q9H4I9 107 aa16.09■□□□□ 0.17
SMCO4-201ENST00000298966 DNAJC4Q9NNZ3 241 aa16.09■□□□□ 0.17
SMCO4-201ENST00000298966 COX7A2P2O60397 106 aa16.08■□□□□ 0.16
SMCO4-201ENST00000298966 OR2C1O95371 312 aa16.08■□□□□ 0.16
SMCO4-201ENST00000298966 PPT1P50897 306 aa16.08■□□□□ 0.16
SMCO4-201ENST00000298966 RAB9AP51151 201 aa16.08■□□□□ 0.16
SMCO4-201ENST00000298966 TAS2R45P59539 299 aa16.08■□□□□ 0.16
SMCO4-201ENST00000298966 CCL20P78556 96 aa16.08■□□□□ 0.16
SMCO4-201ENST00000298966 GUK1Q16774 197 aa16.08■□□□□ 0.16
SMCO4-201ENST00000298966 DEFB136Q30KP8 78 aa16.08■□□□□ 0.16
SMCO4-201ENST00000298966 TIGITQ495A1 244 aa16.08■□□□□ 0.16
SMCO4-201ENST00000298966 GCSAMLQ5JQS6 135 aa16.08■□□□□ 0.16
SMCO4-201ENST00000298966 TOR2AQ5JU69 321 aa16.08■□□□□ 0.16
SMCO4-201ENST00000298966 LCNL1Q6ZST4 164 aa16.08■□□□□ 0.16
SMCO4-201ENST00000298966 SBSPONQ8IVN8 264 aa16.08■□□□□ 0.16
SMCO4-201ENST00000298966 PSG1P11464 419 aa16.07■□□□□ 0.16
SMCO4-201ENST00000298966 ZP3P21754 424 aa16.07■□□□□ 0.16
SMCO4-201ENST00000298966 TAGLN2P37802 199 aaKnown RBP16.07■□□□□ 0.16
SMCO4-201ENST00000298966 RELQ04864 619 aaPredicted RBP16.07■□□□□ 0.16
SMCO4-201ENST00000298966 PEA15Q15121 130 aa16.07■□□□□ 0.16
SMCO4-201ENST00000298966 ZNF600Q6ZNG1 722 aa16.07■□□□□ 0.16
SMCO4-201ENST00000298966 FUT9Q9Y231 359 aa16.07■□□□□ 0.16
SMCO4-201ENST00000298966 TGOLN2O43493 480 aa16.06■□□□□ 0.16
SMCO4-201ENST00000298966 HYPMO75409 117 aa16.06■□□□□ 0.16
SMCO4-201ENST00000298966 RPLP1P05386 114 aaKnown RBP16.06■□□□□ 0.16
SMCO4-201ENST00000298966 CTSGP08311 255 aa16.06■□□□□ 0.16
SMCO4-201ENST00000298966 C10orf113Q5VZT2 155 aa16.06■□□□□ 0.16
SMCO4-201ENST00000298966 ZFAND6Q6FIF0 208 aa16.06■□□□□ 0.16
SMCO4-201ENST00000298966 CCDC140Q96MF4 163 aa16.06■□□□□ 0.16
SMCO4-201ENST00000298966 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.05■□□□□ 0.16
SMCO4-201ENST00000298966 A0A1B0GV50 99 aa16.05■□□□□ 0.16
SMCO4-201ENST00000298966 CXorf1O96002 111 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms