RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 TAS2R45P59539 299 aa11.25□□□□□ -0.61
C9orf3-202ENST00000297979 RHEBQ15382 184 aa11.25□□□□□ -0.61
C9orf3-202ENST00000297979 OR4X1Q8NH49 305 aa11.25□□□□□ -0.61
C9orf3-202ENST00000297979 SMIM12Q96EX1 92 aa11.25□□□□□ -0.61
C9orf3-202ENST00000297979 NOL4LQ96MY1 436 aaPredicted RBP11.25□□□□□ -0.61
C9orf3-202ENST00000297979 TMEM160Q9NX00 188 aa11.25□□□□□ -0.61
C9orf3-202ENST00000297979 C7orf77A4D0Y5 90 aa11.25□□□□□ -0.61
C9orf3-202ENST00000297979 M0QZ24 198 aa11.25□□□□□ -0.61
C9orf3-202ENST00000297979 SCGB2A1O75556 95 aa11.25□□□□□ -0.61
C9orf3-202ENST00000297979 HSPB9Q9BQS6 159 aa11.25□□□□□ -0.61
C9orf3-202ENST00000297979 GEMIN7Q9H840 131 aaKnown RBP11.25□□□□□ -0.61
C9orf3-202ENST00000297979 DOK5Q9P104 306 aa11.25□□□□□ -0.61
C9orf3-202ENST00000297979 PEF1Q9UBV8 284 aaKnown RBP11.25□□□□□ -0.61
C9orf3-202ENST00000297979 LOXL1Q08397 574 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-202ENST00000297979 CST9LP1Q5W188 147 aa11.24□□□□□ -0.61
C9orf3-202ENST00000297979 IGLV11-55A0A075B6I3 123 aa11.24□□□□□ -0.61
C9orf3-202ENST00000297979 EGR2P11161 476 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-202ENST00000297979 ARL3P36405 182 aa11.24□□□□□ -0.61
C9orf3-202ENST00000297979 C10orf113Q5VZT2 155 aa11.24□□□□□ -0.61
C9orf3-202ENST00000297979 PQLC2Q6ZP29 291 aa11.24□□□□□ -0.61
C9orf3-202ENST00000297979 TVP23CQ96ET8 276 aa11.24□□□□□ -0.61
C9orf3-202ENST00000297979 TRAV25A0A0B4J276 109 aa11.23□□□□□ -0.61
C9orf3-202ENST00000297979 IGLC1P0CG04 106 aa11.23□□□□□ -0.61
C9orf3-202ENST00000297979 C8orf88P0DMB2 117 aa11.23□□□□□ -0.61
C9orf3-202ENST00000297979 ATP5G3P48201 142 aa11.23□□□□□ -0.61
C9orf3-202ENST00000297979 KLF17Q5JT82 389 aaPredicted RBP11.23□□□□□ -0.61
C9orf3-202ENST00000297979 C5orf56Q8N8D9 126 aa11.23□□□□□ -0.61
C9orf3-202ENST00000297979 TXNDC17Q9BRA2 123 aa11.23□□□□□ -0.61
C9orf3-202ENST00000297979 MOB4Q9Y3A3 225 aa11.23□□□□□ -0.61
C9orf3-202ENST00000297979 C20orf202A1L168 122 aa11.23□□□□□ -0.61
C9orf3-202ENST00000297979 PDE6DO43924 150 aa11.23□□□□□ -0.61
C9orf3-202ENST00000297979 AVPP01185 164 aa11.23□□□□□ -0.61
C9orf3-202ENST00000297979 S100A2P29034 98 aa11.23□□□□□ -0.61
C9orf3-202ENST00000297979 SGMS2Q8NHU3 365 aa11.23□□□□□ -0.61
C9orf3-202ENST00000297979 PIFOQ8TCI5 191 aa11.23□□□□□ -0.61
C9orf3-202ENST00000297979 FANCD2OSQ96PS1 177 aa11.23□□□□□ -0.61
C9orf3-202ENST00000297979 TMEM167BQ9NRX6 74 aa11.23□□□□□ -0.61
C9orf3-202ENST00000297979 ANKRD17O75179 2603 aaKnown RBP11.23□□□□□ -0.61
C9orf3-202ENST00000297979 ZNF727A8MUV8 499 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 RNF223E7ERA6 249 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 AP4M1O00189 453 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 OR7C2O60412 319 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 PATE2Q6UY27 113 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 TMEM219Q86XT9 240 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 SMCO4Q9NRQ5 59 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 VPS13CQ709C8 3753 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 TRBV7-9A0A0J9YWB2 115 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 J3QLI3 93 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 MORN5Q5VZ52 161 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 RPUSD4Q96CM3 377 aaKnown RBP11.22□□□□□ -0.61
C9orf3-202ENST00000297979 ZNF503Q96F45 646 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 SMIM7Q9BQ49 75 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 USP9YO00507 2555 aaPredicted RBP11.22□□□□□ -0.61
C9orf3-202ENST00000297979 F6UZH7 168 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 ATP6V0E1O15342 81 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 CCL25O15444 150 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 PNRC1Q12796 327 aaPredicted RBP11.22□□□□□ -0.61
C9orf3-202ENST00000297979 KIAA0141Q14154 515 aaPredicted RBP11.22□□□□□ -0.61
C9orf3-202ENST00000297979 MAPK1IP1LQ8NDC0 245 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 SLC25A2Q9BXI2 301 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 PARLQ9H300 379 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 ZNF355PQ9NSJ1 428 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 THYN1Q9P016 225 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 YTHDF2Q9Y5A9 579 aaKnown RBP11.22□□□□□ -0.61
C9orf3-202ENST00000297979 ARL2-SNX15V9GYD0 113 aa11.22□□□□□ -0.61
C9orf3-202ENST00000297979 SNAI2O43623 268 aa11.21□□□□□ -0.61
C9orf3-202ENST00000297979 ORM2P19652 201 aa11.21□□□□□ -0.61
C9orf3-202ENST00000297979 OR1B1Q8NGR6 318 aa11.21□□□□□ -0.61
C9orf3-202ENST00000297979 FAM167A-AS1Q96KT0 104 aa11.21□□□□□ -0.61
C9orf3-202ENST00000297979 UHRF2Q96PU4 802 aa11.21□□□□□ -0.61
C9orf3-202ENST00000297979 SOX21Q9Y651 276 aaPredicted RBP11.21□□□□□ -0.61
C9orf3-202ENST00000297979 PLP1P60201 277 aa11.21□□□□□ -0.62
C9orf3-202ENST00000297979 TIGITQ495A1 244 aa11.21□□□□□ -0.62
C9orf3-202ENST00000297979 UNQ5815/PRO19632Q6UWF5 114 aa11.21□□□□□ -0.62
C9orf3-202ENST00000297979 OR5AU1Q8NGC0 362 aa11.21□□□□□ -0.62
C9orf3-202ENST00000297979 FAM110DQ8TAY7 271 aaPredicted RBP11.21□□□□□ -0.62
C9orf3-202ENST00000297979 MBD6Q96DN6 1003 aa11.21□□□□□ -0.62
C9orf3-202ENST00000297979 PSMG3-AS1Q96PY0 264 aa11.21□□□□□ -0.62
C9orf3-202ENST00000297979 CHD6Q8TD26 2715 aa11.2□□□□□ -0.62
C9orf3-202ENST00000297979 TRAV5A0A0B4J249 113 aa11.2□□□□□ -0.62
C9orf3-202ENST00000297979 ECSCRQ19T08 205 aa11.2□□□□□ -0.62
C9orf3-202ENST00000297979 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.2□□□□□ -0.623e-7■■□□□ 11.6
C9orf3-202ENST00000297979 LINC00305Q7Z4B0 112 aa11.2□□□□□ -0.62
C9orf3-202ENST00000297979 SDF2L1Q9HCN8 221 aa11.2□□□□□ -0.62
C9orf3-202ENST00000297979 NAT8Q9UHE5 227 aa11.2□□□□□ -0.62
C9orf3-202ENST00000297979 SH2D7A6NKC9 451 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-202ENST00000297979 HYPMO75409 117 aa11.2□□□□□ -0.62
C9orf3-202ENST00000297979 IGKV1-17P01599 117 aa11.2□□□□□ -0.62
C9orf3-202ENST00000297979 PSG1P11464 419 aa11.2□□□□□ -0.62
C9orf3-202ENST00000297979 OR51G1Q8NGK1 321 aa11.2□□□□□ -0.62
C9orf3-202ENST00000297979 IFITM10A6NMD0 228 aa11.19□□□□□ -0.62
C9orf3-202ENST00000297979 NPPCP23582 126 aa11.19□□□□□ -0.62
C9orf3-202ENST00000297979 MFAP4P55083 255 aa11.19□□□□□ -0.62
C9orf3-202ENST00000297979 URGCP-MRPS24S4R325 110 aa11.19□□□□□ -0.62
C9orf3-202ENST00000297979 CELSR2Q9HCU4 2923 aa11.19□□□□□ -0.62
C9orf3-202ENST00000297979 B4DEV8 164 aa11.19□□□□□ -0.62
C9orf3-202ENST00000297979 H3BUX3 64 aa11.19□□□□□ -0.62
C9orf3-202ENST00000297979 M0QXV9 152 aa11.19□□□□□ -0.62
C9orf3-202ENST00000297979 OR10J4P0C629 311 aa11.19□□□□□ -0.62
C9orf3-202ENST00000297979 IGHV4-31P0DP07 118 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms