RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 ZFHX2Q9C0A1 2572 aaPredicted RBP7.96□□□□□ -1.13
TNFRSF11B-201ENST00000297350 RIF1Q5UIP0 2472 aaKnown RBP7.96□□□□□ -1.13
TNFRSF11B-201ENST00000297350 TRAV34A0A0B4J273 112 aa7.96□□□□□ -1.14
TNFRSF11B-201ENST00000297350 SERTM2A0A1B0GWG4 89 aa7.96□□□□□ -1.14
TNFRSF11B-201ENST00000297350 FBLL1A6NHQ2 334 aaKnown RBP7.96□□□□□ -1.14
TNFRSF11B-201ENST00000297350 KLRB1Q12918 225 aa7.96□□□□□ -1.14
TNFRSF11B-201ENST00000297350 SLAQ13239 276 aa7.96□□□□□ -1.14
TNFRSF11B-201ENST00000297350 CCDC144NLQ6NUI1 221 aa7.96□□□□□ -1.14
TNFRSF11B-201ENST00000297350 C16orf54Q6UWD8 224 aa7.96□□□□□ -1.14
TNFRSF11B-201ENST00000297350 Q86TA4 180 aa7.96□□□□□ -1.14
TNFRSF11B-201ENST00000297350 BPIFA4PQ86YQ2 179 aa7.96□□□□□ -1.14
TNFRSF11B-201ENST00000297350 KLHDC1Q8N7A1 406 aa7.96□□□□□ -1.14
TNFRSF11B-201ENST00000297350 TMEM75Q8N9X5 138 aa7.96□□□□□ -1.14
TNFRSF11B-201ENST00000297350 VN1R17PQ8TDU5 208 aa7.96□□□□□ -1.14
TNFRSF11B-201ENST00000297350 IGFBPL1Q8WX77 278 aa7.96□□□□□ -1.14
TNFRSF11B-201ENST00000297350 FBXL15Q9H469 300 aa7.96□□□□□ -1.14
TNFRSF11B-201ENST00000297350 ZFP30Q9Y2G7 519 aa7.96□□□□□ -1.14
TNFRSF11B-201ENST00000297350 NAV3Q8IVL0 2385 aa7.96□□□□□ -1.14
TNFRSF11B-201ENST00000297350 F2Z2F3 143 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 SPINK4O60575 86 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 SNRPCP09234 159 aaKnown RBP7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 PSG1P11464 419 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 COX7A1P24310 79 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 COL8A2P25067 703 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 CNTFRP26992 372 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 GPR6P46095 362 aaPredicted RBP7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 KRTDAPP60985 99 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 GNG5P63218 68 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 PDE6HQ13956 83 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 MAJINQ3KP22 176 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 Q6AWC8 147 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 OR4F17Q8NGA8 305 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 FAM168AQ92567 244 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 ALKBH7Q9BT30 221 aaPredicted RBP7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 SSBP3Q9BWW4 388 aaPredicted RBP7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 SNHG12Q9BXW3 62 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 NPIPB5A8MRT5 1133 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 CNIH1O95406 144 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 PLAUP00749 431 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 CA1P00915 261 aaPredicted RBP7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 IGHV3-48P01763 117 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 PMCHP20382 165 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 CDKN1AP38936 164 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 LYZP61626 148 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 SLC35B1P78383 322 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 PRR27Q6MZM9 219 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 CHCHD1Q96BP2 118 aaKnown RBP7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 WNT10AQ9GZT5 417 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 CBLN4Q9NTU7 201 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 ONECUT1Q9UBC0 465 aa7.95□□□□□ -1.14
TNFRSF11B-201ENST00000297350 ODF3BA8MYP8 253 aa7.94□□□□□ -1.14
TNFRSF11B-201ENST00000297350 H3BRN7 92 aa7.94□□□□□ -1.14
TNFRSF11B-201ENST00000297350 TIMM23O14925 209 aa7.94□□□□□ -1.14
TNFRSF11B-201ENST00000297350 EREGO14944 169 aa7.94□□□□□ -1.14
TNFRSF11B-201ENST00000297350 HSBP1O75506 76 aa7.94□□□□□ -1.14
TNFRSF11B-201ENST00000297350 IGKV1-17P01599 117 aa7.94□□□□□ -1.14
TNFRSF11B-201ENST00000297350 PRTN3P24158 256 aa7.94□□□□□ -1.14
TNFRSF11B-201ENST00000297350 FOXA3P55318 350 aaPredicted RBP7.94□□□□□ -1.14
TNFRSF11B-201ENST00000297350 KIAA1644Q3SXP7 199 aa7.94□□□□□ -1.14
TNFRSF11B-201ENST00000297350 NIT1Q86X76 327 aa7.94□□□□□ -1.14
TNFRSF11B-201ENST00000297350 Q8N976 141 aa7.94□□□□□ -1.14
TNFRSF11B-201ENST00000297350 CFHR4Q92496 578 aa7.94□□□□□ -1.14
TNFRSF11B-201ENST00000297350 RCHY1Q96PM5 261 aa7.94□□□□□ -1.14
TNFRSF11B-201ENST00000297350 C1RLQ9NZP8 487 aa7.94□□□□□ -1.14
TNFRSF11B-201ENST00000297350 AKAP13Q12802 2813 aa7.94□□□□□ -1.14
TNFRSF11B-201ENST00000297350 MALRD1Q5VYJ5 2156 aa7.94□□□□□ -1.14
TNFRSF11B-201ENST00000297350 ZFHX4Q86UP3 3567 aa7.94□□□□□ -1.14
TNFRSF11B-201ENST00000297350 TRBV19A0A075B6N1 114 aa7.94□□□□□ -1.14
TNFRSF11B-201ENST00000297350 DSPP15924 2871 aaKnown RBP7.94□□□□□ -1.14
TNFRSF11B-201ENST00000297350 K7EIM0 57 aa7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 HAX1O00165 279 aa7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 CTRLP40313 264 aa7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 MINOS1Q5TGZ0 78 aa7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 ZNF705AQ6ZN79 300 aaPredicted RBP7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 GATD1Q8NB37 220 aa7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 LINC01560Q8TB33 94 aa7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 FAM103A1Q9BTL3 118 aaKnown RBP7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 UQCR10Q9UDW1 63 aa7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 MINOS1-NBL1R4GNA1 71 aa7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 RP1L1Q8IWN7 2480 aaPredicted RBP7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 LOC105371242A0A075B767 164 aa7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 WI2-2373I1.2A0A1W2PRP0 233 aa7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 FAM90A27PA6NNH2 459 aa7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 C3orf79P0CE67 100 aa7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 IGLC2P0DOY2 106 aa7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 GDF5OSQ5U4N7 250 aa7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 RNF125Q96EQ8 232 aa7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 NDFIP1Q9BT67 221 aa7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 THYN1Q9P016 225 aa7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 PAM16Q9Y3D7 125 aa7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 LOC400499M0QZD8 3231 aa7.93□□□□□ -1.14
TNFRSF11B-201ENST00000297350 CCL21O00585 134 aa7.92□□□□□ -1.14
TNFRSF11B-201ENST00000297350 RPLP1P05386 114 aaKnown RBP7.92□□□□□ -1.14
TNFRSF11B-201ENST00000297350 OR5AL1P0C617 328 aa7.92□□□□□ -1.14
TNFRSF11B-201ENST00000297350 TMEM11P17152 192 aa7.92□□□□□ -1.14
TNFRSF11B-201ENST00000297350 COL8A1P27658 744 aa7.92□□□□□ -1.14
TNFRSF11B-201ENST00000297350 C5orf64Q2M2E5 130 aa7.92□□□□□ -1.14
TNFRSF11B-201ENST00000297350 C11orf71Q6IPW1 123 aa7.92□□□□□ -1.14
TNFRSF11B-201ENST00000297350 SPENQ96T58 3664 aaKnown RBP7.92□□□□□ -1.14
TNFRSF11B-201ENST00000297350 FAM181BA6NEQ2 426 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms