RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 C2orf88Q9BSF0 95 aa14.43□□□□□ -0.1
CDC42EP3-201ENST00000295324 TRAV3A0A0B4J244 114 aa14.43□□□□□ -0.1
CDC42EP3-201ENST00000295324 SLC17A3O00476 420 aa14.42□□□□□ -0.1
CDC42EP3-201ENST00000295324 CFHR2P36980 270 aa14.42□□□□□ -0.1
CDC42EP3-201ENST00000295324 FOXA3P55318 350 aaPredicted RBP14.42□□□□□ -0.1
CDC42EP3-201ENST00000295324 FBLN7Q53RD9 439 aa14.42□□□□□ -0.1
CDC42EP3-201ENST00000295324 NMSQ5H8A3 153 aa14.42□□□□□ -0.1
CDC42EP3-201ENST00000295324 ZNF562Q6V9R5 426 aa14.42□□□□□ -0.1
CDC42EP3-201ENST00000295324 C9orf139Q6ZV77 190 aa14.42□□□□□ -0.1
CDC42EP3-201ENST00000295324 REG4Q9BYZ8 158 aa14.42□□□□□ -0.1
CDC42EP3-201ENST00000295324 CUL9Q8IWT3 2517 aa14.42□□□□□ -0.1
CDC42EP3-201ENST00000295324 STAG3L3P0CL85 134 aa14.42□□□□□ -0.1
CDC42EP3-201ENST00000295324 SMIM13P0DJ93 91 aa14.42□□□□□ -0.1
CDC42EP3-201ENST00000295324 BIVMQ86UB2 503 aa14.42□□□□□ -0.1
CDC42EP3-201ENST00000295324 DOCK9Q9BZ29 2069 aa14.42□□□□□ -0.1
CDC42EP3-201ENST00000295324 DTX2Q86UW9 622 aa14.42□□□□□ -0.1
CDC42EP3-201ENST00000295324 C10orf126Q8N4M7 172 aa14.42□□□□□ -0.1
CDC42EP3-201ENST00000295324 GGTLC1Q9BX51 225 aa14.42□□□□□ -0.1
CDC42EP3-201ENST00000295324 CBLN1P23435 193 aa14.41□□□□□ -0.1
CDC42EP3-201ENST00000295324 GBF1Q92538 1859 aa14.41□□□□□ -0.1
CDC42EP3-201ENST00000295324 DNAL4O96015 105 aa14.41□□□□□ -0.1
CDC42EP3-201ENST00000295324 RPL15P61313 204 aaKnown RBP14.41□□□□□ -0.1
CDC42EP3-201ENST00000295324 GTF3C1Q12789 2109 aa14.41□□□□□ -0.1
CDC42EP3-201ENST00000295324 OR11H12B2RN74 326 aa14.41□□□□□ -0.1
CDC42EP3-201ENST00000295324 SUPT4H1P63272 117 aaKnown RBP14.41□□□□□ -0.1
CDC42EP3-201ENST00000295324 MRAP2Q96G30 205 aa14.41□□□□□ -0.1
CDC42EP3-201ENST00000295324 C1QTNF4Q9BXJ3 329 aa14.41□□□□□ -0.1
CDC42EP3-201ENST00000295324 SLC25A39Q9BZJ4 359 aaPredicted RBP14.41□□□□□ -0.1
CDC42EP3-201ENST00000295324 MED13LQ71F56 2210 aa14.41□□□□□ -0.1
CDC42EP3-201ENST00000295324 ZNF688P0C7X2 276 aa14.4□□□□□ -0.1
CDC42EP3-201ENST00000295324 PMS2P5A8MQ11 134 aa14.4□□□□□ -0.1
CDC42EP3-201ENST00000295324 PLXNA2O75051 1894 aa14.4□□□□□ -0.1
CDC42EP3-201ENST00000295324 A0A1B0GV72 72 aa14.4□□□□□ -0.1
CDC42EP3-201ENST00000295324 TEX36Q5VZQ5 186 aa14.4□□□□□ -0.1
CDC42EP3-201ENST00000295324 DMRTC2Q8IXT2 367 aaPredicted RBP14.4□□□□□ -0.1
CDC42EP3-201ENST00000295324 TRAV9-1A0A075B6T8 112 aa14.4□□□□□ -0.1
CDC42EP3-201ENST00000295324 WISP1O95388 367 aa14.4□□□□□ -0.1
CDC42EP3-201ENST00000295324 ORMDL3Q8N138 153 aa14.4□□□□□ -0.1
CDC42EP3-201ENST00000295324 NOTCH3Q9UM47 2321 aa14.4□□□□□ -0.1
CDC42EP3-201ENST00000295324 LOXP28300 417 aaPredicted RBP14.4□□□□□ -0.1
CDC42EP3-201ENST00000295324 ATP5LO75964 103 aa14.39□□□□□ -0.11
CDC42EP3-201ENST00000295324 Q71RC1 249 aaPredicted RBP14.39□□□□□ -0.11
CDC42EP3-201ENST00000295324 PRB1P04280 392 aa14.39□□□□□ -0.11
CDC42EP3-201ENST00000295324 CACNG7P62955 275 aa14.39□□□□□ -0.11
CDC42EP3-201ENST00000295324 ZNF581Q9P0T4 197 aa14.39□□□□□ -0.11
CDC42EP3-201ENST00000295324 C5orf24Q7Z6I8 188 aa14.39□□□□□ -0.11
CDC42EP3-201ENST00000295324 TMEM183AQ8IXX5 376 aa14.39□□□□□ -0.11
CDC42EP3-201ENST00000295324 KLF2Q9Y5W3 355 aaPredicted RBP14.39□□□□□ -0.11
CDC42EP3-201ENST00000295324 LHFPL4Q7Z7J7 247 aa14.39□□□□□ -0.11
CDC42EP3-201ENST00000295324 TMEM170BQ5T4T1 132 aa14.38□□□□□ -0.11
CDC42EP3-201ENST00000295324 TMEM14EPQ6UXP3 125 aa14.38□□□□□ -0.11
CDC42EP3-201ENST00000295324 WFDC12Q8WWY7 111 aa14.38□□□□□ -0.11
CDC42EP3-201ENST00000295324 ZNF503-AS2A6NEH8 195 aa14.38□□□□□ -0.11
CDC42EP3-201ENST00000295324 HIGD1CA8MV81 97 aa14.38□□□□□ -0.11
CDC42EP3-201ENST00000295324 UBE2DNLQ8IWF7 75 aa14.38□□□□□ -0.11
CDC42EP3-201ENST00000295324 DAZ1Q9NQZ3 744 aaKnown RBP14.38□□□□□ -0.11
CDC42EP3-201ENST00000295324 IZUMO1RA6ND01 250 aa14.38□□□□□ -0.11
CDC42EP3-201ENST00000295324 IGKV1-16P04430 117 aa14.38□□□□□ -0.11
CDC42EP3-201ENST00000295324 CTAG1AP78358 180 aa14.38□□□□□ -0.11
CDC42EP3-201ENST00000295324 OR10J3Q5JRS4 329 aa14.38□□□□□ -0.11
CDC42EP3-201ENST00000295324 SELENOKQ9Y6D0 94 aa14.38□□□□□ -0.11
CDC42EP3-201ENST00000295324 SCGB3A1Q96QR1 104 aa14.38□□□□□ -0.11
CDC42EP3-201ENST00000295324 RHPN1-AS1Q9BWJ2 59 aa14.38□□□□□ -0.11
CDC42EP3-201ENST00000295324 SCRT1Q9BWW7 348 aa14.38□□□□□ -0.11
CDC42EP3-201ENST00000295324 HS3ST6Q96QI5 342 aa14.37□□□□□ -0.11
CDC42EP3-201ENST00000295324 H3BRM9 83 aa14.37□□□□□ -0.11
CDC42EP3-201ENST00000295324 NTF4P34130 210 aa14.37□□□□□ -0.11
CDC42EP3-201ENST00000295324 KIR3DL3Q8N743 410 aa14.37□□□□□ -0.11
CDC42EP3-201ENST00000295324 TRAV5A0A0B4J249 113 aa14.37□□□□□ -0.11
CDC42EP3-201ENST00000295324 OR13C6PQ8NH95 151 aa14.37□□□□□ -0.11
CDC42EP3-201ENST00000295324 CACNA1AO00555 2505 aa14.37□□□□□ -0.11
CDC42EP3-201ENST00000295324 TMEM50AO95807 157 aa14.37□□□□□ -0.11
CDC42EP3-201ENST00000295324 RPL35AP18077 110 aaKnown RBP14.37□□□□□ -0.11
CDC42EP3-201ENST00000295324 MBD3L1Q8WWY6 194 aa14.37□□□□□ -0.11
CDC42EP3-201ENST00000295324 ZNF524Q96C55 264 aa14.37□□□□□ -0.11
CDC42EP3-201ENST00000295324 OR11H1Q8NG94 326 aa14.36□□□□□ -0.11
CDC42EP3-201ENST00000295324 OR11H2Q8NH07 326 aa14.36□□□□□ -0.11
CDC42EP3-201ENST00000295324 FAM110DQ8TAY7 271 aaPredicted RBP14.36□□□□□ -0.11
CDC42EP3-201ENST00000295324 ST20Q9HBF5 79 aa14.36□□□□□ -0.11
CDC42EP3-201ENST00000295324 NDPQ00604 133 aa14.36□□□□□ -0.11
CDC42EP3-201ENST00000295324 OSTCQ9NRP0 149 aa14.36□□□□□ -0.11
CDC42EP3-201ENST00000295324 MRPL16Q9NX20 251 aaKnown RBP14.36□□□□□ -0.11
CDC42EP3-201ENST00000295324 OVOL3O00110 214 aa14.36□□□□□ -0.11
CDC42EP3-201ENST00000295324 APOHP02749 345 aaPredicted RBP14.36□□□□□ -0.11
CDC42EP3-201ENST00000295324 SYNJ2BPP57105 145 aa14.36□□□□□ -0.11
CDC42EP3-201ENST00000295324 ZNF414Q96IQ9 312 aa14.36□□□□□ -0.11
CDC42EP3-201ENST00000295324 CFAP161Q6P656 301 aa14.35□□□□□ -0.11
CDC42EP3-201ENST00000295324 DOCK10Q96BY6 2186 aa14.35□□□□□ -0.11
CDC42EP3-201ENST00000295324 F2Z2F3 143 aa14.35□□□□□ -0.11
CDC42EP3-201ENST00000295324 ATP6V0E1O15342 81 aa14.35□□□□□ -0.11
CDC42EP3-201ENST00000295324 ACTL10Q5JWF8 245 aa14.35□□□□□ -0.11
CDC42EP3-201ENST00000295324 LRRK1Q38SD2 2015 aa14.35□□□□□ -0.11
CDC42EP3-201ENST00000295324 TOMM40O96008 361 aa14.35□□□□□ -0.11
CDC42EP3-201ENST00000295324 TMEM160Q9NX00 188 aa14.35□□□□□ -0.11
CDC42EP3-201ENST00000295324 KAAG1Q9UBP8 84 aa14.35□□□□□ -0.11
CDC42EP3-201ENST00000295324 RNASE2P10153 161 aaKnown RBP14.35□□□□□ -0.11
CDC42EP3-201ENST00000295324 LINC00205P59089 165 aa14.35□□□□□ -0.11
CDC42EP3-201ENST00000295324 CARHSP1Q9Y2V2 147 aaKnown RBP14.35□□□□□ -0.11
CDC42EP3-201ENST00000295324 PIEZO1Q92508 2521 aa14.35□□□□□ -0.11
CDC42EP3-201ENST00000295324 CRPP02741 224 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms