RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 CLN5O75503 358 aa11.67□□□□□ -0.54
CCDC140-201ENST00000295226 CTSGP08311 255 aa11.67□□□□□ -0.54
CCDC140-201ENST00000295226 ADMP35318 185 aa11.67□□□□□ -0.54
CCDC140-201ENST00000295226 TREML4Q6UXN2 200 aa11.67□□□□□ -0.54
CCDC140-201ENST00000295226 CBLN2Q8IUK8 224 aa11.67□□□□□ -0.54
CCDC140-201ENST00000295226 CITED1Q99966 193 aa11.67□□□□□ -0.54
CCDC140-201ENST00000295226 RPS10P5Q9NQ39 176 aa11.67□□□□□ -0.54
CCDC140-201ENST00000295226 PEF1Q9UBV8 284 aaKnown RBP11.67□□□□□ -0.54
CCDC140-201ENST00000295226 VAX2Q9UIW0 290 aa11.67□□□□□ -0.54
CCDC140-201ENST00000295226 IGHV4OR15-8A0A075B7B6 117 aa11.66□□□□□ -0.54
CCDC140-201ENST00000295226 A0A087WW49 117 aa11.66□□□□□ -0.54
CCDC140-201ENST00000295226 C7orf77A4D0Y5 90 aa11.66□□□□□ -0.54
CCDC140-201ENST00000295226 ZFP92A6NM28 416 aa11.66□□□□□ -0.54
CCDC140-201ENST00000295226 OR10J1P30954 320 aa11.66□□□□□ -0.54
CCDC140-201ENST00000295226 ARL3P36405 182 aa11.66□□□□□ -0.54
CCDC140-201ENST00000295226 ELLP55199 621 aaPredicted RBP11.66□□□□□ -0.54
CCDC140-201ENST00000295226 ZNF90Q03938 601 aa11.66□□□□□ -0.54
CCDC140-201ENST00000295226 ZNF726P1Q15940 193 aa11.66□□□□□ -0.54
CCDC140-201ENST00000295226 FFAR4Q5NUL3 377 aa11.66□□□□□ -0.54
CCDC140-201ENST00000295226 LCN15Q6UWW0 184 aa11.66□□□□□ -0.54
CCDC140-201ENST00000295226 TMEM144Q7Z5S9 345 aa11.66□□□□□ -0.54
CCDC140-201ENST00000295226 C3orf56Q8N813 242 aa11.66□□□□□ -0.54
CCDC140-201ENST00000295226 OR10G9Q8NGN4 311 aa11.66□□□□□ -0.54
CCDC140-201ENST00000295226 OR10G7Q8NGN6 311 aa11.66□□□□□ -0.54
CCDC140-201ENST00000295226 RXFP4Q8TDU9 374 aa11.66□□□□□ -0.54
CCDC140-201ENST00000295226 C4orf3Q8WVX3 66 aa11.66□□□□□ -0.54
CCDC140-201ENST00000295226 NPVFQ9HCQ7 196 aa11.66□□□□□ -0.54
CCDC140-201ENST00000295226 GNG13Q9P2W3 67 aa11.66□□□□□ -0.54
CCDC140-201ENST00000295226 IGHV3OR16-8A0A075B7F1 116 aa11.65□□□□□ -0.54
CCDC140-201ENST00000295226 BMPR1BO00238 502 aa11.65□□□□□ -0.54
CCDC140-201ENST00000295226 OR2C1O95371 312 aa11.65□□□□□ -0.54
CCDC140-201ENST00000295226 IGKV1-17P01599 117 aa11.65□□□□□ -0.54
CCDC140-201ENST00000295226 IGLC1P0CG04 106 aa11.65□□□□□ -0.54
CCDC140-201ENST00000295226 GATA2P23769 480 aaPredicted RBP11.65□□□□□ -0.54
CCDC140-201ENST00000295226 FAM122CQ6P4D5 195 aa11.65□□□□□ -0.54
CCDC140-201ENST00000295226 RPP25LQ8N5L8 163 aaKnown RBP11.65□□□□□ -0.54
CCDC140-201ENST00000295226 TXN2Q99757 166 aa11.65□□□□□ -0.54
CCDC140-201ENST00000295226 NIPSNAP3BQ9BS92 247 aa11.65□□□□□ -0.54
CCDC140-201ENST00000295226 VSIRQ9H7M9 311 aa11.65□□□□□ -0.54
CCDC140-201ENST00000295226 MANBALQ9NQG1 85 aa11.65□□□□□ -0.54
CCDC140-201ENST00000295226 TGOLN2O43493 480 aa11.65□□□□□ -0.55
CCDC140-201ENST00000295226 PNRC1Q12796 327 aaPredicted RBP11.65□□□□□ -0.55
CCDC140-201ENST00000295226 OR11H1Q8NG94 326 aa11.65□□□□□ -0.55
CCDC140-201ENST00000295226 TVP23CQ96ET8 276 aa11.65□□□□□ -0.55
CCDC140-201ENST00000295226 ZNF414Q96IQ9 312 aa11.65□□□□□ -0.55
CCDC140-201ENST00000295226 RAX2Q96IS3 184 aa11.65□□□□□ -0.55
CCDC140-201ENST00000295226 MGST2Q99735 147 aa11.65□□□□□ -0.55
CCDC140-201ENST00000295226 ZNF747Q9BV97 191 aa11.65□□□□□ -0.55
CCDC140-201ENST00000295226 A0A087WWC5 75 aa11.64□□□□□ -0.55
CCDC140-201ENST00000295226 B4DEV8 164 aa11.64□□□□□ -0.55
CCDC140-201ENST00000295226 FOLR2P14207 255 aa11.64□□□□□ -0.55
CCDC140-201ENST00000295226 FCGR2BP31994 310 aaPredicted RBP11.64□□□□□ -0.55
CCDC140-201ENST00000295226 RIPPLY3P57055 190 aa11.64□□□□□ -0.55
CCDC140-201ENST00000295226 RAB31Q13636 194 aa11.64□□□□□ -0.55
CCDC140-201ENST00000295226 RNF212Q495C1 297 aa11.64□□□□□ -0.55
CCDC140-201ENST00000295226 TEPPQ6URK8 271 aa11.64□□□□□ -0.55
CCDC140-201ENST00000295226 NDUFA11Q86Y39 141 aa11.64□□□□□ -0.55
CCDC140-201ENST00000295226 THAP8Q8NA92 274 aa11.64□□□□□ -0.55
CCDC140-201ENST00000295226 OR1N2Q8NGR9 330 aa11.64□□□□□ -0.55
CCDC140-201ENST00000295226 MLXQ9UH92 298 aa11.64□□□□□ -0.55
CCDC140-201ENST00000295226 LSM4Q9Y4Z0 139 aaKnown RBP11.64□□□□□ -0.55
CCDC140-201ENST00000295226 SEC14L6B5MCN3 397 aa11.63□□□□□ -0.55
CCDC140-201ENST00000295226 H3BQ15 152 aa11.63□□□□□ -0.55
CCDC140-201ENST00000295226 MT-ND4LP03901 98 aa11.63□□□□□ -0.55
CCDC140-201ENST00000295226 PSMB3P49720 205 aa11.63□□□□□ -0.55
CCDC140-201ENST00000295226 SLURP1P55000 103 aa11.63□□□□□ -0.55
CCDC140-201ENST00000295226 CYB561D1Q8N8Q1 229 aa11.63□□□□□ -0.55
CCDC140-201ENST00000295226 PUS1Q9Y606 427 aaKnown RBP eCLIP11.63□□□□□ -0.55
CCDC140-201ENST00000295226 COLCA2A8K830 154 aa11.62□□□□□ -0.55
CCDC140-201ENST00000295226 CCL24O00175 119 aa11.62□□□□□ -0.55
CCDC140-201ENST00000295226 PRELID1Q9Y255 219 aa11.62□□□□□ -0.55
CCDC140-201ENST00000295226 CXorf65A6NEN9 183 aa11.62□□□□□ -0.55
CCDC140-201ENST00000295226 TMEM250H0YL14 139 aa11.62□□□□□ -0.55
CCDC140-201ENST00000295226 GGCTO75223 188 aaKnown RBP11.62□□□□□ -0.55
CCDC140-201ENST00000295226 PSG1P11464 419 aa11.62□□□□□ -0.55
CCDC140-201ENST00000295226 HOXD3P31249 432 aaPredicted RBP11.62□□□□□ -0.55
CCDC140-201ENST00000295226 CDC34P49427 236 aaPredicted RBP11.62□□□□□ -0.55
CCDC140-201ENST00000295226 CYP2G1PQ6ZSU1 146 aa11.62□□□□□ -0.55
CCDC140-201ENST00000295226 DPF1Q92782 380 aa11.62□□□□□ -0.55
CCDC140-201ENST00000295226 TRGV9Q99603 122 aa11.62□□□□□ -0.55
CCDC140-201ENST00000295226 GAR1Q9NY12 217 aaKnown RBP11.62□□□□□ -0.55
CCDC140-201ENST00000295226 VWFP04275 2813 aa11.62□□□□□ -0.55
CCDC140-201ENST00000295226 TRAV30A0A087WSZ9 112 aa11.61□□□□□ -0.55
CCDC140-201ENST00000295226 LINC01619G3V211 115 aa11.61□□□□□ -0.55
CCDC140-201ENST00000295226 YIF1AO95070 293 aa11.61□□□□□ -0.55
CCDC140-201ENST00000295226 RD3LP0DJH9 198 aa11.61□□□□□ -0.55
CCDC140-201ENST00000295226 MEF2BQ02080 365 aaPredicted RBP11.61□□□□□ -0.55
CCDC140-201ENST00000295226 RPEL1Q2QD12 228 aa11.61□□□□□ -0.55
CCDC140-201ENST00000295226 MIC13Q5XKP0 118 aa11.61□□□□□ -0.55
CCDC140-201ENST00000295226 UNQ9165/PRO28630Q6UXU0 137 aa11.61□□□□□ -0.55
CCDC140-201ENST00000295226 TXNDC17Q9BRA2 123 aa11.61□□□□□ -0.55
CCDC140-201ENST00000295226 GGTLC1Q9BX51 225 aa11.61□□□□□ -0.55
CCDC140-201ENST00000295226 SLC45A2Q9UMX9 530 aa11.61□□□□□ -0.55
CCDC140-201ENST00000295226 TRRAPQ9Y4A5 3859 aa11.6□□□□□ -0.55
CCDC140-201ENST00000295226 ZNF320A2RRD8 509 aa11.6□□□□□ -0.55
CCDC140-201ENST00000295226 ZNF207O43670 478 aaKnown RBP11.6□□□□□ -0.55
CCDC140-201ENST00000295226 FGF8P55075 233 aaPredicted RBP11.6□□□□□ -0.55
CCDC140-201ENST00000295226 SYNJ2BPP57105 145 aa11.6□□□□□ -0.55
CCDC140-201ENST00000295226 TOMM20LQ6UXN7 152 aa11.6□□□□□ -0.55
CCDC140-201ENST00000295226 SSX7Q7RTT5 188 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms