RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 LYRM7Q5U5X0 104 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 ZNF502Q8TBZ5 544 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 BOD1L1Q8NFC6 3051 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 IFITM10A6NMD0 228 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 NPIPB5A8MRT5 1133 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 CORTO00230 105 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 ATP5G2Q06055 141 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 CFAP161Q6P656 301 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 HIST1H2BLQ99880 126 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 FAM215AQ9Y5M1 114 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 IGKV3OR2-268A0A0C4DH90 116 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 H0YJW9 148 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 SAMD13Q5VXD3 122 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 RUSC1-AS1Q66K80 236 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 FAM71F2Q6NXP2 309 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 ASCL4Q6XD76 172 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 ZNF114Q8NC26 417 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 DYNLRB2Q8TF09 96 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 SETD2Q9BYW2 2564 aaPredicted RBP3.9□□□□□ -1.79
UBR1-201ENST00000290650 CCDC168Q8NDH2 2452 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 J3QW42 95 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 PSG1P11464 419 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 PRCDQ00LT1 54 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 UTF1Q5T230 341 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 LCN12Q6JVE5 192 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 TMEM14EPQ6UXP3 125 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 TMEM144Q7Z5S9 345 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 ZNF329Q86UD4 541 aa3.9□□□□□ -1.79
UBR1-201ENST00000290650 CITED2Q99967 270 aaPredicted RBP3.9□□□□□ -1.79
UBR1-201ENST00000290650 CD99P14209 185 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 FBLN7Q53RD9 439 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 LCNL1Q6ZST4 164 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 FAM168AQ92567 244 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 GRAMD2BQ96HH9 432 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 C21orf62Q9NYP8 219 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 ANAPC10Q9UM13 185 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 WDR83OSQ9Y284 106 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 MYO18BQ8IUG5 2567 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 IGHV1-3A0A0C4DH29 117 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 SRRM4A7MD48 611 aaKnown RBP3.89□□□□□ -1.79
UBR1-201ENST00000290650 NBR2O15453 112 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 GCGP01275 180 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 GPX1P07203 203 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 SCGB1C2P0DMR2 95 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 COX6B1P14854 86 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 RNASE4P34096 147 aaKnown RBP3.89□□□□□ -1.79
UBR1-201ENST00000290650 ATP5IP56385 69 aaPredicted RBP3.89□□□□□ -1.79
UBR1-201ENST00000290650 CD69Q07108 199 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 MBD3L4A6NDZ8 208 aaPredicted RBP3.89□□□□□ -1.79
UBR1-201ENST00000290650 MBD3L3A6NE82 208 aaPredicted RBP3.89□□□□□ -1.79
UBR1-201ENST00000290650 MBD3L5A6NJ08 208 aaPredicted RBP3.89□□□□□ -1.79
UBR1-201ENST00000290650 TGFAP01135 160 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 IGLV3-1P01715 115 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 C17orf58Q2M2W7 97 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 FAM90A2PQ658T7 463 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 SFTA2Q6UW10 78 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 UNQ6494/PRO21346Q6UXR6 183 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 SCGB1D4Q6XE38 83 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 Q6ZS92 163 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 MBD3L2Q8NHZ7 208 aaPredicted RBP3.89□□□□□ -1.79
UBR1-201ENST00000290650 RITA1Q96K30 269 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 PHLDA3Q9Y5J5 127 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 NCR2O95944 276 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 NUDT3O95989 172 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 IGHG3P01860 377 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 APOHP02749 345 aaPredicted RBP3.89□□□□□ -1.79
UBR1-201ENST00000290650 THBDP07204 575 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 UCNP55089 124 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 PAFAH1B2P68402 229 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 LINC01551Q86U37 167 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 TMEM191AQ9H0A3 160 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 ABCA2Q9BZC7 2435 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 TCRBV4S1A1TA0A5B7 111 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 PRSS47A8MTI9 375 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 PRSS8Q16651 343 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 TEX38Q6PEX7 206 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 OR10J6PQ8NGY7 276 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 HSPB8Q9UJY1 196 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 HIVEP3Q5T1R4 2406 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 HLA-DQA1P01909 254 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 AMBPP02760 352 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 HBBP68871 147 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 RHOGP84095 191 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 TMEM97Q5BJF2 176 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 TMEM160Q9NX00 188 aa3.89□□□□□ -1.79
UBR1-201ENST00000290650 SMKR1H3BMG3 65 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 NPPCP23582 126 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 CENPVQ7Z7K6 275 aaPredicted RBP3.88□□□□□ -1.79
UBR1-201ENST00000290650 DSPP15924 2871 aaKnown RBP3.88□□□□□ -1.79
UBR1-201ENST00000290650 M0R3E3 92 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 EREGO14944 169 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 Q6ZPA2 131 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 BPESC1Q9GZL8 116 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 MBNL3Q9NUK0 354 aaKnown RBP3.88□□□□□ -1.79
UBR1-201ENST00000290650 A0A087WWC5 75 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 A0A1W2PPI3 338 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 H3BVH4 76 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 SLC25A48Q6ZT89 311 aaKnown RBP3.88□□□□□ -1.79
UBR1-201ENST00000290650 C11orf53Q8IXP5 236 aa3.88□□□□□ -1.79
UBR1-201ENST00000290650 NUDT10Q8NFP7 164 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms