RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 Q9H3A6 140 aa9.34□□□□□ -0.91
NPC1L1-201ENST00000289547 DOCK10Q96BY6 2186 aa9.34□□□□□ -0.91
NPC1L1-201ENST00000289547 E7EQL1 145 aa9.34□□□□□ -0.91
NPC1L1-201ENST00000289547 FGFBP3Q8TAT2 258 aa9.34□□□□□ -0.91
NPC1L1-201ENST00000289547 RSPO3Q9BXY4 272 aaPredicted RBP9.34□□□□□ -0.91
NPC1L1-201ENST00000289547 NPFFR1Q9GZQ6 430 aa9.34□□□□□ -0.91
NPC1L1-201ENST00000289547 TRAV5A0A0B4J249 113 aa9.33□□□□□ -0.92
NPC1L1-201ENST00000289547 FOXI3A8MTJ6 420 aaPredicted RBP9.33□□□□□ -0.92
NPC1L1-201ENST00000289547 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.33□□□□□ -0.92
NPC1L1-201ENST00000289547 ZNF138P52744 262 aa9.33□□□□□ -0.92
NPC1L1-201ENST00000289547 GEMIN7Q9H840 131 aaKnown RBP9.33□□□□□ -0.92
NPC1L1-201ENST00000289547 TMEM238C9JI98 176 aa9.33□□□□□ -0.92
NPC1L1-201ENST00000289547 GATA3P23771 443 aa9.33□□□□□ -0.92
NPC1L1-201ENST00000289547 SEPSECSQ9HD40 501 aaKnown RBP9.33□□□□□ -0.92
NPC1L1-201ENST00000289547 LYNX1G3V0Z9 82 aa9.33□□□□□ -0.92
NPC1L1-201ENST00000289547 PF4P02776 101 aa9.33□□□□□ -0.92
NPC1L1-201ENST00000289547 LYNX1P0DP58 116 aa9.33□□□□□ -0.92
NPC1L1-201ENST00000289547 PF4V1P10720 104 aa9.33□□□□□ -0.92
NPC1L1-201ENST00000289547 FAM201AQ5SY85 155 aa9.33□□□□□ -0.92
NPC1L1-201ENST00000289547 FAM53AQ6NSI3 398 aaPredicted RBP9.33□□□□□ -0.92
NPC1L1-201ENST00000289547 ZCCHC24Q8N2G6 241 aaKnown RBP9.33□□□□□ -0.92
NPC1L1-201ENST00000289547 CIARTQ8N365 385 aaPredicted RBP9.33□□□□□ -0.92
NPC1L1-201ENST00000289547 TSSC4Q9Y5U2 329 aaPredicted RBP9.33□□□□□ -0.92
NPC1L1-201ENST00000289547 CCL25O15444 150 aa9.33□□□□□ -0.92
NPC1L1-201ENST00000289547 PRTN3P24158 256 aa9.33□□□□□ -0.92
NPC1L1-201ENST00000289547 CACNG8Q8WXS5 425 aa9.32□□□□□ -0.92
NPC1L1-201ENST00000289547 A0A0G2JRQ6 117 aa9.32□□□□□ -0.92
NPC1L1-201ENST00000289547 OTOGLQ3ZCN5 2332 aa9.32□□□□□ -0.92
NPC1L1-201ENST00000289547 C10orf142B7Z368 130 aa9.32□□□□□ -0.92
NPC1L1-201ENST00000289547 IGLL1P15814 213 aa9.32□□□□□ -0.92
NPC1L1-201ENST00000289547 TMEM249Q2WGJ8 235 aa9.32□□□□□ -0.92
NPC1L1-201ENST00000289547 TEX43Q6ZNM6 134 aa9.32□□□□□ -0.92
NPC1L1-201ENST00000289547 FOXL2NBQ6ZUU3 175 aa9.32□□□□□ -0.92
NPC1L1-201ENST00000289547 TEX45Q8NA69 505 aa9.32□□□□□ -0.92
NPC1L1-201ENST00000289547 Q96MF0 132 aa9.32□□□□□ -0.92
NPC1L1-201ENST00000289547 KLHDC3Q9BQ90 382 aa9.32□□□□□ -0.92
NPC1L1-201ENST00000289547 IGKCP01834 107 aa9.32□□□□□ -0.92
NPC1L1-201ENST00000289547 OR9G9P0C7N8 305 aa9.32□□□□□ -0.92
NPC1L1-201ENST00000289547 GTSCR1Q86UQ5 136 aa9.32□□□□□ -0.92
NPC1L1-201ENST00000289547 NUP35Q8NFH5 326 aa9.32□□□□□ -0.92
NPC1L1-201ENST00000289547 KIR2DL4Q99706 377 aa9.32□□□□□ -0.92
NPC1L1-201ENST00000289547 IGHV3-35A0A0C4DH35 117 aa9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 TMEM155Q4W5P6 130 aa9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 RASL11AQ6T310 242 aa9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 DNM1P46Q6ZS02 220 aa9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 C16orf92Q96LL3 132 aa9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 ZNF581Q9P0T4 197 aa9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 RABAC1Q9UI14 185 aa9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 KIR2DL5BA0A0G2JN68 375 aa9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 KIR2DL5BA0A0G2JPC4 375 aa9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 TMEM178BH3BS89 294 aa9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 SRD5A1P18405 259 aa9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 Q6ZRM9 215 aa9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 KIR2DL5AQ8N109 375 aa9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 TNFRSF14Q92956 283 aa9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 MUC22E2RYF6 1773 aaPredicted RBP9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 C5orf63A6NC05 138 aa9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 OR5AN1Q8NGI8 311 aa9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 LY96Q9Y6Y9 160 aa9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 MFAP4P55083 255 aa9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 SHANK1Q9Y566 2161 aa9.31□□□□□ -0.92
NPC1L1-201ENST00000289547 IGHV4-39P01824 125 aa9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 FXYD7P58549 80 aa9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 ETDBQ3ZM63 59 aa9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 KIR3DL3Q8N743 410 aa9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 IGKV1-27A0A075B6S5 117 aa9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 TRAV8-1A0A0A6YYK1 113 aa9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 RAB9AP51151 201 aa9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 CIRBPQ14011 172 aaKnown RBP9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 C18orf32Q8TCD1 76 aa9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 ITLN2Q8WWU7 325 aaPredicted RBP9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 CHD3Q12873 2000 aaKnown RBP9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 RNF223E7ERA6 249 aa9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 M0R381 172 aa9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 ATP6V0BQ99437 205 aa9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 CITED1Q99966 193 aa9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 PRSS22Q9GZN4 317 aa9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 TRAV8-4A0A0B4J246 113 aa9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 YPEL3P61236 119 aaPredicted RBP9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 ZNF843Q8N446 348 aa9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 OR10J6PQ8NGY7 276 aa9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 PIEZO1Q92508 2521 aa9.3□□□□□ -0.92
NPC1L1-201ENST00000289547 POLEQ07864 2286 aa9.29□□□□□ -0.92
NPC1L1-201ENST00000289547 CFPP27918 469 aa9.29□□□□□ -0.92
NPC1L1-201ENST00000289547 FHL1Q13642 323 aa9.29□□□□□ -0.92
NPC1L1-201ENST00000289547 ZNF815PA8K554 130 aa9.29□□□□□ -0.92
NPC1L1-201ENST00000289547 DNAL4O96015 105 aa9.29□□□□□ -0.92
NPC1L1-201ENST00000289547 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.29□□□□□ -0.92
NPC1L1-201ENST00000289547 OSR1Q8TAX0 266 aaPredicted RBP9.29□□□□□ -0.92
NPC1L1-201ENST00000289547 MGST2Q99735 147 aa9.29□□□□□ -0.92
NPC1L1-201ENST00000289547 MYO7BQ6PIF6 2116 aa9.29□□□□□ -0.92
NPC1L1-201ENST00000289547 SRRM5B3KS81 715 aa9.29□□□□□ -0.92
NPC1L1-201ENST00000289547 BPESC1Q9GZL8 116 aa9.29□□□□□ -0.92
NPC1L1-201ENST00000289547 IGHV2-26A0A0B4J1V2 119 aa9.29□□□□□ -0.92
NPC1L1-201ENST00000289547 C15orf61A6NNL5 157 aa9.29□□□□□ -0.92
NPC1L1-201ENST00000289547 AZU1P20160 251 aa9.29□□□□□ -0.92
NPC1L1-201ENST00000289547 ADORA2A-AS1P86434 159 aa9.29□□□□□ -0.92
NPC1L1-201ENST00000289547 NXT2Q9NPJ8 142 aaKnown RBP9.29□□□□□ -0.92
NPC1L1-201ENST00000289547 PHF3Q92576 2039 aaKnown RBP9.29□□□□□ -0.92
NPC1L1-201ENST00000289547 TRAV40A0A0B4J280 105 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms